RNA–Protein interactions for RNA: ENST00000368936.5

PRUNE1-204, Transcript of prune exopolyphosphatase 1, humanhuman

TSL 1 (best) BASIC

Gene PRUNE1, Length 2,788 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE1-204ENST00000368936 ELP3Q9H9T3 547 aa10.11□□□□□ -0.79
PRUNE1-204ENST00000368936 PDGFCQ9NRA1 345 aa10.11□□□□□ -0.79
PRUNE1-204ENST00000368936 GRID1Q9ULK0 1009 aa10.11□□□□□ -0.79
PRUNE1-204ENST00000368936 hCG_1818297A0A087WSY0 165 aa10.1□□□□□ -0.79
PRUNE1-204ENST00000368936 C19orf81C9J6K1 198 aa10.1□□□□□ -0.79
PRUNE1-204ENST00000368936 ASAP2O43150 1006 aa10.1□□□□□ -0.79
PRUNE1-204ENST00000368936 TOM1L1O75674 476 aa10.1□□□□□ -0.79
PRUNE1-204ENST00000368936 ATG7O95352 703 aa10.1□□□□□ -0.79
PRUNE1-204ENST00000368936 HOXC6P09630 235 aa10.1□□□□□ -0.79
PRUNE1-204ENST00000368936 MAN1A1P33908 653 aa10.1□□□□□ -0.79
PRUNE1-204ENST00000368936 GCLCP48506 637 aaPredicted RBP10.1□□□□□ -0.79
PRUNE1-204ENST00000368936 ZNF132P52740 706 aa10.1□□□□□ -0.79
PRUNE1-204ENST00000368936 OTUD4Q01804 1114 aaKnown RBP10.1□□□□□ -0.79
PRUNE1-204ENST00000368936 TARBP2Q15633 366 aaKnown RBP10.1□□□□□ -0.79
PRUNE1-204ENST00000368936 MAPK6Q16659 721 aa10.1□□□□□ -0.79
PRUNE1-204ENST00000368936 MSS51Q4VC12 460 aa10.1□□□□□ -0.79
PRUNE1-204ENST00000368936 PARP9Q8IXQ6 854 aa10.1□□□□□ -0.79
PRUNE1-204ENST00000368936 ARFGAP1Q8N6T3 406 aa10.1□□□□□ -0.79
PRUNE1-204ENST00000368936 C3orf20Q8ND61 904 aa10.1□□□□□ -0.79
PRUNE1-204ENST00000368936 ACTL9Q8TC94 416 aa10.1□□□□□ -0.79
PRUNE1-204ENST00000368936 MAIP1Q8WWC4 291 aa10.1□□□□□ -0.79
PRUNE1-204ENST00000368936 CPB2Q96IY4 423 aa10.1□□□□□ -0.79
PRUNE1-204ENST00000368936 ACO2Q99798 780 aaKnown RBP10.1□□□□□ -0.79
PRUNE1-204ENST00000368936 ROPN1BQ9BZX4 212 aaPredicted RBP10.1□□□□□ -0.79
PRUNE1-204ENST00000368936 NSRP1Q9H0G5 558 aaKnown RBP10.1□□□□□ -0.79
PRUNE1-204ENST00000368936 SDCBP2Q9H190 292 aa10.1□□□□□ -0.79
PRUNE1-204ENST00000368936 ROPN1Q9HAT0 212 aaPredicted RBP10.1□□□□□ -0.79
PRUNE1-204ENST00000368936 TXNRD2Q9NNW7 524 aa10.1□□□□□ -0.79
PRUNE1-204ENST00000368936 DNALI1O14645 258 aaPredicted RBP10.1□□□□□ -0.79
PRUNE1-204ENST00000368936 CST8O60676 142 aa10.1□□□□□ -0.79
PRUNE1-204ENST00000368936 CDH16O75309 829 aa10.1□□□□□ -0.79
PRUNE1-204ENST00000368936 LRCH4O75427 683 aa10.1□□□□□ -0.79
PRUNE1-204ENST00000368936 STAM2O75886 525 aa10.1□□□□□ -0.79
PRUNE1-204ENST00000368936 PIGRP01833 764 aa10.1□□□□□ -0.79
PRUNE1-204ENST00000368936 WDR4P57081 412 aaKnown RBP10.1□□□□□ -0.79
PRUNE1-204ENST00000368936 MMRN1Q13201 1228 aa10.1□□□□□ -0.79
PRUNE1-204ENST00000368936 NPNTQ6UXI9 565 aa10.1□□□□□ -0.79
PRUNE1-204ENST00000368936 TRIM72Q6ZMU5 477 aa10.1□□□□□ -0.79
PRUNE1-204ENST00000368936 WDR49Q8IV35 697 aa10.1□□□□□ -0.79
PRUNE1-204ENST00000368936 FITM2Q8N6M3 262 aa10.1□□□□□ -0.79
PRUNE1-204ENST00000368936 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.1□□□□□ -0.79
PRUNE1-204ENST00000368936 UBA3Q8TBC4 463 aa10.1□□□□□ -0.79
PRUNE1-204ENST00000368936 CALN1Q9BXU9 219 aa10.1□□□□□ -0.79
PRUNE1-204ENST00000368936 SPATC1LQ9H0A9 340 aa10.1□□□□□ -0.79
PRUNE1-204ENST00000368936 ALG13Q9NP73 1137 aaKnown RBP10.1□□□□□ -0.79
PRUNE1-204ENST00000368936 ADARB2Q9NS39 739 aaKnown RBP10.1□□□□□ -0.79
PRUNE1-204ENST00000368936 GGA2Q9UJY4 613 aa10.1□□□□□ -0.79
PRUNE1-204ENST00000368936 USP15Q9Y4E8 981 aaPredicted RBP10.1□□□□□ -0.79
PRUNE1-204ENST00000368936 OTOFQ9HC10 1997 aa10.1□□□□□ -0.79
PRUNE1-204ENST00000368936 ZBTB42B2RXF5 422 aa10.09□□□□□ -0.79
PRUNE1-204ENST00000368936 MAFO75444 373 aaPredicted RBP10.09□□□□□ -0.79
PRUNE1-204ENST00000368936 TJP3O95049 919 aa10.09□□□□□ -0.79
PRUNE1-204ENST00000368936 ITGB3P05106 788 aa10.09□□□□□ -0.79
PRUNE1-204ENST00000368936 CDKN2BP42772 138 aa10.09□□□□□ -0.79
PRUNE1-204ENST00000368936 MCCD1P59942 119 aaPredicted RBP10.09□□□□□ -0.79
PRUNE1-204ENST00000368936 SNCBQ16143 134 aa10.09□□□□□ -0.79
PRUNE1-204ENST00000368936 TFDP3Q5H9I0 405 aa10.09□□□□□ -0.79
PRUNE1-204ENST00000368936 LBX2Q6XYB7 198 aa10.09□□□□□ -0.79
PRUNE1-204ENST00000368936 ZC3H18Q86VM9 953 aaKnown RBP10.09□□□□□ -0.79
PRUNE1-204ENST00000368936 APOBEC3FQ8IUX4 373 aaKnown RBP10.09□□□□□ -0.79
PRUNE1-204ENST00000368936 ZCCHC9Q8N567 271 aaKnown RBP10.09□□□□□ -0.79
PRUNE1-204ENST00000368936 ALLCQ8N6M5 410 aa10.09□□□□□ -0.79
PRUNE1-204ENST00000368936 CCDC63Q8NA47 563 aa10.09□□□□□ -0.79
PRUNE1-204ENST00000368936 TMEM35BQ8NCS4 154 aa10.09□□□□□ -0.79
PRUNE1-204ENST00000368936 SGSM3Q96HU1 749 aa10.09□□□□□ -0.79
PRUNE1-204ENST00000368936 NIFKQ9BYG3 293 aaKnown RBP10.09□□□□□ -0.79
PRUNE1-204ENST00000368936 NRBP2Q9NSY0 501 aa10.09□□□□□ -0.79
PRUNE1-204ENST00000368936 NKIRAS1Q9NYS0 192 aa10.09□□□□□ -0.79
PRUNE1-204ENST00000368936 SLC12A4Q9UP95 1085 aa10.09□□□□□ -0.79
PRUNE1-204ENST00000368936 GINS2Q9Y248 185 aa10.09□□□□□ -0.79
PRUNE1-204ENST00000368936 MYO18AQ92614 2054 aaKnown RBP10.09□□□□□ -0.79
PRUNE1-204ENST00000368936 IGKV6D-21A0A0A0MT36 114 aa10.09□□□□□ -0.79
PRUNE1-204ENST00000368936 TCRBV5S1A1TA0A578 114 aa10.09□□□□□ -0.79
PRUNE1-204ENST00000368936 OGTO15294 1046 aa10.09□□□□□ -0.79
PRUNE1-204ENST00000368936 ERBB2P04626 1255 aa10.09□□□□□ -0.79
PRUNE1-204ENST00000368936 RPA3P35244 121 aaPredicted RBP10.09□□□□□ -0.79
PRUNE1-204ENST00000368936 PSMC1P62191 440 aaKnown RBP10.09□□□□□ -0.79
PRUNE1-204ENST00000368936 IRX3P78415 501 aaPredicted RBP10.09□□□□□ -0.79
PRUNE1-204ENST00000368936 ELF3P78545 371 aaPredicted RBP10.09□□□□□ -0.79
PRUNE1-204ENST00000368936 BASP1P80723 227 aaKnown RBP10.09□□□□□ -0.79
PRUNE1-204ENST00000368936 TFDP1Q14186 410 aa10.09□□□□□ -0.79
PRUNE1-204ENST00000368936 SMAD1Q15797 465 aaKnown RBP10.09□□□□□ -0.79
PRUNE1-204ENST00000368936 DUOXA2Q1HG44 320 aa10.09□□□□□ -0.79
PRUNE1-204ENST00000368936 SPATA21Q7Z572 469 aa10.09□□□□□ -0.79
PRUNE1-204ENST00000368936 UBR7Q8N806 425 aa10.09□□□□□ -0.79
PRUNE1-204ENST00000368936 GPATCH11Q8N954 259 aa10.09□□□□□ -0.79
PRUNE1-204ENST00000368936 CKAP2Q8WWK9 683 aa10.09□□□□□ -0.79
PRUNE1-204ENST00000368936 SEPT1Q8WYJ6 367 aa10.09□□□□□ -0.79
PRUNE1-204ENST00000368936 RBM41Q96IZ5 413 aaKnown RBP10.09□□□□□ -0.79
PRUNE1-204ENST00000368936 SPATA33Q96N06 139 aa10.09□□□□□ -0.79
PRUNE1-204ENST00000368936 XYLT2Q9H1B5 865 aa10.09□□□□□ -0.79
PRUNE1-204ENST00000368936 KDM4CQ9H3R0 1056 aa10.09□□□□□ -0.79
PRUNE1-204ENST00000368936 ECT2Q9H8V3 914 aa10.09□□□□□ -0.79
PRUNE1-204ENST00000368936 CPSF3Q9UKF6 684 aaKnown RBP10.09□□□□□ -0.79
PRUNE1-204ENST00000368936 L3MBTL1Q9Y468 752 aa10.09□□□□□ -0.79
PRUNE1-204ENST00000368936 LOC285556D6RIA3 1793 aa10.09□□□□□ -0.79
PRUNE1-204ENST00000368936 ABLIM1O14639 778 aa10.09□□□□□ -0.79
PRUNE1-204ENST00000368936 ATP2A1O14983 1001 aa10.09□□□□□ -0.79
PRUNE1-204ENST00000368936 CALB1P05937 261 aa10.09□□□□□ -0.79
PRUNE1-204ENST00000368936 FGFR1P11362 822 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms