RNA–Protein interactions for RNA: ENST00000368356.8

FDPS-202, Transcript of farnesyl diphosphate synthase, humanhuman

APPRIS P3 TSL 2 BASIC

Gene FDPS, Length 1,431 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-202ENST00000368356 TDRD12Q587J7 1177 aaKnown RBP16.74■□□□□ 0.27
FDPS-202ENST00000368356 FAM171A1Q5VUB5 890 aa16.74■□□□□ 0.27
FDPS-202ENST00000368356 OVOS1Q6IE37 1185 aa16.74■□□□□ 0.27
FDPS-202ENST00000368356 ZNF571Q7Z3V5 609 aaPredicted RBP16.74■□□□□ 0.27
FDPS-202ENST00000368356 NOP9Q86U38 636 aaKnown RBP16.74■□□□□ 0.27
FDPS-202ENST00000368356 CCDC170Q8IYT3 715 aa16.74■□□□□ 0.27
FDPS-202ENST00000368356 ZNF606Q8WXB4 792 aa16.74■□□□□ 0.27
FDPS-202ENST00000368356 PPP2R3CQ969Q6 453 aa16.74■□□□□ 0.27
FDPS-202ENST00000368356 TMEM169Q96HH4 297 aa16.74■□□□□ 0.27
FDPS-202ENST00000368356 TNIP3Q96KP6 325 aa16.74■□□□□ 0.27
FDPS-202ENST00000368356 RTP3Q9BQQ7 232 aa16.74■□□□□ 0.27
FDPS-202ENST00000368356 ACBD6Q9BR61 282 aa16.74■□□□□ 0.27
FDPS-202ENST00000368356 DNAI2Q9GZS0 605 aa16.74■□□□□ 0.27
FDPS-202ENST00000368356 NSUN3Q9H649 340 aaKnown RBP16.74■□□□□ 0.27
FDPS-202ENST00000368356 NHEJ1Q9H9Q4 299 aaPredicted RBP16.74■□□□□ 0.27
FDPS-202ENST00000368356 STK39Q9UEW8 545 aa16.74■□□□□ 0.27
FDPS-202ENST00000368356 PUF60Q9UHX1 559 aaKnown RBP16.74■□□□□ 0.27
FDPS-202ENST00000368356 PTPRDP23468 1912 aa16.74■□□□□ 0.27
FDPS-202ENST00000368356 ARHGAP6O43182 974 aa16.73■□□□□ 0.27
FDPS-202ENST00000368356 VDRP11473 427 aa16.73■□□□□ 0.27
FDPS-202ENST00000368356 PCSK1P29120 753 aa16.73■□□□□ 0.27
FDPS-202ENST00000368356 TKTP29401 623 aaKnown RBP16.73■□□□□ 0.27
FDPS-202ENST00000368356 CDR2Q01850 454 aa16.73■□□□□ 0.27
FDPS-202ENST00000368356 SKIV2LQ15477 1246 aaKnown RBP16.73■□□□□ 0.27
FDPS-202ENST00000368356 DDX53Q86TM3 631 aaKnown RBP16.73■□□□□ 0.27
FDPS-202ENST00000368356 GPIHBP1Q8IV16 184 aa16.73■□□□□ 0.27
FDPS-202ENST00000368356 THEM5Q8N1Q8 247 aa16.73■□□□□ 0.27
FDPS-202ENST00000368356 OLIG1Q8TAK6 271 aa16.73■□□□□ 0.27
FDPS-202ENST00000368356 ZNF830Q96NB3 372 aaPredicted RBP16.73■□□□□ 0.27
FDPS-202ENST00000368356 AGPAT1Q99943 283 aa16.73■□□□□ 0.27
FDPS-202ENST00000368356 VN1R3Q9BXE9 311 aa16.73■□□□□ 0.27
FDPS-202ENST00000368356 TLR9Q9NR96 1032 aa16.73■□□□□ 0.27
FDPS-202ENST00000368356 CHST7Q9NS84 486 aa16.73■□□□□ 0.27
FDPS-202ENST00000368356 CDH9Q9ULB4 789 aa16.73■□□□□ 0.27
FDPS-202ENST00000368356 MYO7AQ13402 2215 aa16.73■□□□□ 0.27
FDPS-202ENST00000368356 SOD2P04179 222 aa16.72■□□□□ 0.27
FDPS-202ENST00000368356 PDGFRBP09619 1106 aa16.72■□□□□ 0.27
FDPS-202ENST00000368356 CHRNB2P17787 502 aa16.72■□□□□ 0.27
FDPS-202ENST00000368356 EIF4A3P38919 411 aaKnown RBP16.72■□□□□ 0.27
FDPS-202ENST00000368356 BMS1Q14692 1282 aaKnown RBP16.72■□□□□ 0.27
FDPS-202ENST00000368356 USP41Q3LFD5 358 aa16.72■□□□□ 0.27
FDPS-202ENST00000368356 VARS2Q5ST30 1063 aaKnown RBP16.72■□□□□ 0.27
FDPS-202ENST00000368356 PDE12Q6L8Q7 609 aaKnown RBP16.72■□□□□ 0.27
FDPS-202ENST00000368356 ACOT1Q86TX2 421 aa16.72■□□□□ 0.27
FDPS-202ENST00000368356 SLC30A5Q8TAD4 765 aa16.72■□□□□ 0.27
FDPS-202ENST00000368356 TFAP2BQ92481 460 aa16.72■□□□□ 0.27
FDPS-202ENST00000368356 CCDC42Q96M95 316 aa16.72■□□□□ 0.27
FDPS-202ENST00000368356 ZSWIM1Q9BR11 485 aa16.72■□□□□ 0.27
FDPS-202ENST00000368356 TTPALQ9BTX7 342 aa16.72■□□□□ 0.27
FDPS-202ENST00000368356 SOWAHDA6NJG2 315 aa16.71■□□□□ 0.27
FDPS-202ENST00000368356 THAP12O43422 761 aa16.71■□□□□ 0.27
FDPS-202ENST00000368356 HCRTO43612 131 aa16.71■□□□□ 0.27
FDPS-202ENST00000368356 CSPG5O95196 566 aa16.71■□□□□ 0.27
FDPS-202ENST00000368356 DNAJB1P25685 340 aa16.71■□□□□ 0.27
FDPS-202ENST00000368356 FMO1Q01740 532 aa16.71■□□□□ 0.27
FDPS-202ENST00000368356 ORC1Q13415 861 aa16.71■□□□□ 0.27
FDPS-202ENST00000368356 CAMK1Q14012 370 aa16.71■□□□□ 0.27
FDPS-202ENST00000368356 STILQ15468 1287 aa16.71■□□□□ 0.27
FDPS-202ENST00000368356 CNGA2Q16280 664 aa16.71■□□□□ 0.27
FDPS-202ENST00000368356 SGO2Q562F6 1265 aa16.71■□□□□ 0.27
FDPS-202ENST00000368356 KIAA0319Q5VV43 1072 aa16.71■□□□□ 0.27
FDPS-202ENST00000368356 ARHGAP17Q68EM7 881 aa16.71■□□□□ 0.27
FDPS-202ENST00000368356 RAD9BQ6WBX8 426 aa16.71■□□□□ 0.27
FDPS-202ENST00000368356 ANKS3Q6ZW76 656 aa16.71■□□□□ 0.27
FDPS-202ENST00000368356 TAS1R1Q7RTX1 841 aa16.71■□□□□ 0.27
FDPS-202ENST00000368356 VPS36Q86VN1 386 aa16.71■□□□□ 0.27
FDPS-202ENST00000368356 CEP57Q86XR8 500 aa16.71■□□□□ 0.27
FDPS-202ENST00000368356 GPR65Q8IYL9 337 aa16.71■□□□□ 0.27
FDPS-202ENST00000368356 B3GALNT2Q8NCR0 500 aa16.71■□□□□ 0.27
FDPS-202ENST00000368356 SLC20A1Q8WUM9 679 aa16.71■□□□□ 0.27
FDPS-202ENST00000368356 HEXIM2Q96MH2 286 aaKnown RBP16.71■□□□□ 0.27
FDPS-202ENST00000368356 SYT15Q9BQS2 421 aa16.71■□□□□ 0.27
FDPS-202ENST00000368356 OXCT2Q9BYC2 517 aaPredicted RBP16.71■□□□□ 0.27
FDPS-202ENST00000368356 DPEP3Q9H4B8 488 aa16.71■□□□□ 0.27
FDPS-202ENST00000368356 THEGQ9P2T0 379 aa16.71■□□□□ 0.27
FDPS-202ENST00000368356 PCDHGC3Q9UN70 934 aa16.71■□□□□ 0.27
FDPS-202ENST00000368356 EPN1Q9Y6I3 576 aaPredicted RBP16.71■□□□□ 0.27
FDPS-202ENST00000368356 MED7O43513 233 aa16.7■□□□□ 0.26
FDPS-202ENST00000368356 TBC1D4O60343 1298 aa16.7■□□□□ 0.26
FDPS-202ENST00000368356 LCA5LO95447 670 aa16.7■□□□□ 0.26
FDPS-202ENST00000368356 CALCAP01258 141 aa16.7■□□□□ 0.26
FDPS-202ENST00000368356 MMEP08473 750 aa16.7■□□□□ 0.26
FDPS-202ENST00000368356 CD19P15391 556 aa16.7■□□□□ 0.26
FDPS-202ENST00000368356 PTPN1P18031 435 aaKnown RBP16.7■□□□□ 0.26
FDPS-202ENST00000368356 TNFAIP3P21580 790 aa16.7■□□□□ 0.26
FDPS-202ENST00000368356 BRD2P25440 801 aaKnown RBP16.7■□□□□ 0.26
FDPS-202ENST00000368356 CYLC1P35663 651 aaPredicted RBP16.7■□□□□ 0.26
FDPS-202ENST00000368356 SLC18A3Q16572 532 aa16.7■□□□□ 0.26
FDPS-202ENST00000368356 RTP2Q5QGT7 225 aa16.7■□□□□ 0.26
FDPS-202ENST00000368356 FAM171BQ6P995 826 aa16.7■□□□□ 0.26
FDPS-202ENST00000368356 C12orf29Q8N999 325 aa16.7■□□□□ 0.26
FDPS-202ENST00000368356 PIK3R5Q8WYR1 880 aa16.7■□□□□ 0.26
FDPS-202ENST00000368356 TRIM44Q96DX7 344 aaPredicted RBP16.7■□□□□ 0.26
FDPS-202ENST00000368356 HERC2P3Q9BVR0 1158 aa16.7■□□□□ 0.26
FDPS-202ENST00000368356 DEF6Q9H4E7 631 aa16.7■□□□□ 0.26
FDPS-202ENST00000368356 ADAMTS1Q9UHI8 967 aa16.7■□□□□ 0.26
FDPS-202ENST00000368356 COG5Q9UP83 839 aa16.7■□□□□ 0.26
FDPS-202ENST00000368356 A0A087X0T9 212 aa16.7■□□□□ 0.26
FDPS-202ENST00000368356 EIF3CLB5ME19 914 aaKnown RBP16.7■□□□□ 0.26
FDPS-202ENST00000368356 H7C4K7 107 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms