RNA–Protein interactions for RNA: ENST00000367621.1

VTA1-201, Transcript of vesicle trafficking 1, humanhuman

TSL 5 BASIC

Gene VTA1, Length 1,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-201ENST00000367621 CYP1A2P05177 515 aa10.1□□□□□ -0.79
VTA1-201ENST00000367621 FAM163BP0C2L3 166 aa10.1□□□□□ -0.79
VTA1-201ENST00000367621 EN2P19622 333 aaPredicted RBP10.1□□□□□ -0.79
VTA1-201ENST00000367621 IBSPP21815 317 aaPredicted RBP10.1□□□□□ -0.79
VTA1-201ENST00000367621 LMO2P25791 158 aa10.1□□□□□ -0.79
VTA1-201ENST00000367621 CDH5P33151 784 aaPredicted RBP10.1□□□□□ -0.79
VTA1-201ENST00000367621 GATMP50440 423 aa10.1□□□□□ -0.79
VTA1-201ENST00000367621 NOMO3P69849 1222 aa10.1□□□□□ -0.79
VTA1-201ENST00000367621 CENPCQ03188 943 aa10.1□□□□□ -0.79
VTA1-201ENST00000367621 PTP4A2Q12974 167 aa10.1□□□□□ -0.79
VTA1-201ENST00000367621 TUSC3Q13454 348 aa10.1□□□□□ -0.79
VTA1-201ENST00000367621 SV2CQ496J9 727 aa10.1□□□□□ -0.79
VTA1-201ENST00000367621 NOMO2Q5JPE7 1267 aa10.1□□□□□ -0.79
VTA1-201ENST00000367621 ZNF569Q5MCW4 686 aa10.1□□□□□ -0.79
VTA1-201ENST00000367621 DENND1BQ6P3S1 775 aa10.1□□□□□ -0.79
VTA1-201ENST00000367621 ZNF280BQ86YH2 543 aa10.1□□□□□ -0.79
VTA1-201ENST00000367621 PDCL2Q8N4E4 241 aa10.1□□□□□ -0.79
VTA1-201ENST00000367621 RNF10Q8N5U6 811 aaKnown RBP10.1□□□□□ -0.79
VTA1-201ENST00000367621 TOP6BLQ8N6T0 577 aa10.1□□□□□ -0.79
VTA1-201ENST00000367621 TMEM176AQ96HP8 235 aa10.1□□□□□ -0.79
VTA1-201ENST00000367621 ZNF560Q96MR9 790 aa10.1□□□□□ -0.79
VTA1-201ENST00000367621 RPS6KC1Q96S38 1066 aa10.1□□□□□ -0.79
VTA1-201ENST00000367621 MMS19Q96T76 1030 aa10.1□□□□□ -0.79
VTA1-201ENST00000367621 SPSB2Q99619 263 aa10.1□□□□□ -0.79
VTA1-201ENST00000367621 LPIN3Q9BQK8 851 aa10.1□□□□□ -0.79
VTA1-201ENST00000367621 THAP2Q9H0W7 228 aa10.1□□□□□ -0.79
VTA1-201ENST00000367621 SEPT11Q9NVA2 429 aaKnown RBP10.1□□□□□ -0.79
VTA1-201ENST00000367621 TBC1D13Q9NVG8 400 aa10.1□□□□□ -0.79
VTA1-201ENST00000367621 MYO1AQ9UBC5 1043 aa10.1□□□□□ -0.79
VTA1-201ENST00000367621 DNAI1Q9UI46 699 aa10.1□□□□□ -0.79
VTA1-201ENST00000367621 PCDHGC3Q9UN70 934 aa10.1□□□□□ -0.79
VTA1-201ENST00000367621 COG5Q9UP83 839 aa10.1□□□□□ -0.79
VTA1-201ENST00000367621 INPP5FQ9Y2H2 1132 aa10.1□□□□□ -0.79
VTA1-201ENST00000367621 R3HCC1Q9Y3T6 440 aaKnown RBP10.1□□□□□ -0.79
VTA1-201ENST00000367621 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.1□□□□□ -0.79
VTA1-201ENST00000367621 CAPN6Q9Y6Q1 641 aa10.1□□□□□ -0.79
VTA1-201ENST00000367621 GRID2IPA4D2P6 1211 aa10.09□□□□□ -0.79
VTA1-201ENST00000367621 O00370 1275 aa10.09□□□□□ -0.79
VTA1-201ENST00000367621 CYB561D2O14569 222 aa10.09□□□□□ -0.79
VTA1-201ENST00000367621 GABRDO14764 452 aa10.09□□□□□ -0.79
VTA1-201ENST00000367621 BUB1O43683 1085 aa10.09□□□□□ -0.79
VTA1-201ENST00000367621 CLSTN1O94985 981 aa10.09□□□□□ -0.79
VTA1-201ENST00000367621 TIMP1P01033 207 aa10.09□□□□□ -0.79
VTA1-201ENST00000367621 ITGB1P05556 798 aa10.09□□□□□ -0.79
VTA1-201ENST00000367621 PFKMP08237 780 aa10.09□□□□□ -0.79
VTA1-201ENST00000367621 VDRP11473 427 aa10.09□□□□□ -0.79
VTA1-201ENST00000367621 WARSP23381 471 aaKnown RBP10.09□□□□□ -0.79
VTA1-201ENST00000367621 RFC2P35250 354 aa10.09□□□□□ -0.79
VTA1-201ENST00000367621 CNGA2Q16280 664 aa10.09□□□□□ -0.79
VTA1-201ENST00000367621 TIGD5Q53EQ6 642 aa10.09□□□□□ -0.79
VTA1-201ENST00000367621 KIAA0319Q5VV43 1072 aa10.09□□□□□ -0.79
VTA1-201ENST00000367621 NAA35Q5VZE5 725 aa10.09□□□□□ -0.79
VTA1-201ENST00000367621 WSCD1Q658N2 575 aa10.09□□□□□ -0.79
VTA1-201ENST00000367621 GLB1LQ6UWU2 654 aa10.09□□□□□ -0.79
VTA1-201ENST00000367621 TRIM72Q6ZMU5 477 aa10.09□□□□□ -0.79
VTA1-201ENST00000367621 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.09□□□□□ -0.79
VTA1-201ENST00000367621 MON1BQ7L1V2 547 aa10.09□□□□□ -0.79
VTA1-201ENST00000367621 DPH6Q7L8W6 267 aa10.09□□□□□ -0.79
VTA1-201ENST00000367621 DEFB128Q7Z7B8 93 aa10.09□□□□□ -0.79
VTA1-201ENST00000367621 UNC93AQ86WB7 457 aa10.09□□□□□ -0.79
VTA1-201ENST00000367621 PHF13Q86YI8 300 aaPredicted RBP10.09□□□□□ -0.79
VTA1-201ENST00000367621 PASD1Q8IV76 773 aa10.09□□□□□ -0.79
VTA1-201ENST00000367621 COLGALT2Q8IYK4 626 aa10.09□□□□□ -0.79
VTA1-201ENST00000367621 MCOLN2Q8IZK6 566 aa10.09□□□□□ -0.79
VTA1-201ENST00000367621 CRYBG2Q8N1P7 616 aa10.09□□□□□ -0.79
VTA1-201ENST00000367621 TTC39CQ8N584 583 aa10.09□□□□□ -0.79
VTA1-201ENST00000367621 LRRC57Q8N9N7 239 aa10.09□□□□□ -0.79
VTA1-201ENST00000367621 CPA5Q8WXQ8 436 aa10.09□□□□□ -0.79
VTA1-201ENST00000367621 SECISBP2LQ93073 1101 aaKnown RBP10.09□□□□□ -0.79
VTA1-201ENST00000367621 SENP8Q96LD8 212 aa10.09□□□□□ -0.79
VTA1-201ENST00000367621 NT5C1AQ9BXI3 368 aa10.09□□□□□ -0.79
VTA1-201ENST00000367621 LHX5Q9H2C1 402 aa10.09□□□□□ -0.79
VTA1-201ENST00000367621 DPEP3Q9H4B8 488 aa10.09□□□□□ -0.79
VTA1-201ENST00000367621 LUC7LQ9NQ29 371 aaKnown RBP10.09□□□□□ -0.79
VTA1-201ENST00000367621 TOR4AQ9NXH8 423 aa10.09□□□□□ -0.79
VTA1-201ENST00000367621 PUF60Q9UHX1 559 aaKnown RBP10.09□□□□□ -0.79
VTA1-201ENST00000367621 CYTH4Q9UIA0 394 aa10.09□□□□□ -0.79
VTA1-201ENST00000367621 PCDHGC5Q9Y5F6 944 aa10.09□□□□□ -0.79
VTA1-201ENST00000367621 RALGAPA2Q2PPJ7 1873 aa10.08□□□□□ -0.8
VTA1-201ENST00000367621 TCRBV5S1A1TA0A578 114 aa10.08□□□□□ -0.8
VTA1-201ENST00000367621 M0QZQ0 153 aa10.08□□□□□ -0.8
VTA1-201ENST00000367621 MTA2O94776 668 aa10.08□□□□□ -0.8
VTA1-201ENST00000367621 MICAL2O94851 1124 aa10.08□□□□□ -0.8
VTA1-201ENST00000367621 LSM8O95777 96 aaKnown RBP10.08□□□□□ -0.8
VTA1-201ENST00000367621 ABCB4P21439 1286 aa10.08□□□□□ -0.8
VTA1-201ENST00000367621 GNL1P36915 607 aaPredicted RBP10.08□□□□□ -0.8
VTA1-201ENST00000367621 GPC5P78333 572 aa10.08□□□□□ -0.8
VTA1-201ENST00000367621 AMPD2Q01433 879 aa10.08□□□□□ -0.8
VTA1-201ENST00000367621 ARHGAP17Q68EM7 881 aa10.08□□□□□ -0.8
VTA1-201ENST00000367621 LLGL2Q6P1M3 1020 aa10.08□□□□□ -0.8
VTA1-201ENST00000367621 CNKSR3Q6P9H4 555 aa10.08□□□□□ -0.8
VTA1-201ENST00000367621 DCLRE1AQ6PJP8 1040 aa10.08□□□□□ -0.8
VTA1-201ENST00000367621 LCLAT1Q6UWP7 414 aa10.08□□□□□ -0.8
VTA1-201ENST00000367621 SLFN11Q7Z7L1 901 aa10.08□□□□□ -0.8
VTA1-201ENST00000367621 ACOT1Q86TX2 421 aa10.08□□□□□ -0.8
VTA1-201ENST00000367621 TXLNBQ8N3L3 684 aa10.08□□□□□ -0.8
VTA1-201ENST00000367621 C12orf29Q8N999 325 aa10.08□□□□□ -0.8
VTA1-201ENST00000367621 APPL2Q8NEU8 664 aa10.08□□□□□ -0.8
VTA1-201ENST00000367621 TPCN2Q8NHX9 752 aa10.08□□□□□ -0.8
VTA1-201ENST00000367621 KIF18AQ8NI77 898 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms