RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 SP9P0CG40 484 aa14.68□□□□□ -0.06
TNFRSF1A-202ENST00000366159 GDI1P31150 447 aa14.68□□□□□ -0.06
TNFRSF1A-202ENST00000366159 MAGEA9P43362 315 aa14.68□□□□□ -0.06
TNFRSF1A-202ENST00000366159 AFMP43652 599 aa14.68□□□□□ -0.06
TNFRSF1A-202ENST00000366159 LHX1P48742 406 aa14.68□□□□□ -0.06
TNFRSF1A-202ENST00000366159 CYP24A1Q07973 514 aa14.68□□□□□ -0.06
TNFRSF1A-202ENST00000366159 BFSP1Q12934 665 aa14.68□□□□□ -0.06
TNFRSF1A-202ENST00000366159 UBXN2BQ14CS0 331 aa14.68□□□□□ -0.06
TNFRSF1A-202ENST00000366159 PSMD6Q15008 389 aa14.68□□□□□ -0.06
TNFRSF1A-202ENST00000366159 NFE2Q16621 373 aaPredicted RBP14.68□□□□□ -0.06
TNFRSF1A-202ENST00000366159 INTS6LQ5JSJ4 861 aaKnown RBP14.68□□□□□ -0.06
TNFRSF1A-202ENST00000366159 FAM171BQ6P995 826 aa14.68□□□□□ -0.06
TNFRSF1A-202ENST00000366159 TRAPPC11Q7Z392 1133 aa14.68□□□□□ -0.06
TNFRSF1A-202ENST00000366159 NELFCDQ8IXH7 590 aa14.68□□□□□ -0.06
TNFRSF1A-202ENST00000366159 XXYLT1Q8NBI6 393 aa14.68□□□□□ -0.06
TNFRSF1A-202ENST00000366159 ZNF516Q92618 1163 aa14.68□□□□□ -0.06
TNFRSF1A-202ENST00000366159 PAGE5Q96GU1 130 aa14.68□□□□□ -0.06
TNFRSF1A-202ENST00000366159 CHAMP1Q96JM3 812 aa14.68□□□□□ -0.06
TNFRSF1A-202ENST00000366159 TASP1Q9H6P5 420 aa14.68□□□□□ -0.06
TNFRSF1A-202ENST00000366159 ABCB6Q9NP58 842 aa14.68□□□□□ -0.06
TNFRSF1A-202ENST00000366159 OBP2AQ9NY56 170 aa14.68□□□□□ -0.06
TNFRSF1A-202ENST00000366159 ABI2Q9NYB9 513 aaPredicted RBP14.68□□□□□ -0.06
TNFRSF1A-202ENST00000366159 CGNQ9P2M7 1197 aaKnown RBP14.68□□□□□ -0.06
TNFRSF1A-202ENST00000366159 GTF3C4Q9UKN8 822 aa14.68□□□□□ -0.06
TNFRSF1A-202ENST00000366159 CHADO15335 359 aa14.67□□□□□ -0.06
TNFRSF1A-202ENST00000366159 HCRTO43612 131 aa14.67□□□□□ -0.06
TNFRSF1A-202ENST00000366159 TNNC2P02585 160 aa14.67□□□□□ -0.06
TNFRSF1A-202ENST00000366159 ACAT1P24752 427 aaKnown RBP14.67□□□□□ -0.06
TNFRSF1A-202ENST00000366159 CDC25CP30307 473 aa14.67□□□□□ -0.06
TNFRSF1A-202ENST00000366159 MYL7Q01449 175 aa14.67□□□□□ -0.06
TNFRSF1A-202ENST00000366159 TSPY1Q01534 308 aa14.67□□□□□ -0.06
TNFRSF1A-202ENST00000366159 STK4Q13043 487 aa14.67□□□□□ -0.06
TNFRSF1A-202ENST00000366159 VEPH1Q14D04 833 aa14.67□□□□□ -0.06
TNFRSF1A-202ENST00000366159 KNOP1Q1ED39 458 aaKnown RBP14.67□□□□□ -0.06
TNFRSF1A-202ENST00000366159 CFAP221Q4G0U5 840 aa14.67□□□□□ -0.06
TNFRSF1A-202ENST00000366159 GPR158Q5T848 1215 aa14.67□□□□□ -0.06
TNFRSF1A-202ENST00000366159 ADGRF2Q8IZF7 708 aa14.67□□□□□ -0.06
TNFRSF1A-202ENST00000366159 RDH13Q8NBN7 331 aa14.67□□□□□ -0.06
TNFRSF1A-202ENST00000366159 GIPC2Q8TF65 315 aa14.67□□□□□ -0.06
TNFRSF1A-202ENST00000366159 NOC3LQ8WTT2 800 aaKnown RBP14.67□□□□□ -0.06
TNFRSF1A-202ENST00000366159 HPDLQ96IR7 371 aa14.67□□□□□ -0.06
TNFRSF1A-202ENST00000366159 CGRRF1Q99675 332 aa14.67□□□□□ -0.06
TNFRSF1A-202ENST00000366159 PI4K2AQ9BTU6 479 aa14.67□□□□□ -0.06
TNFRSF1A-202ENST00000366159 SLC46A2Q9BY10 475 aa14.67□□□□□ -0.06
TNFRSF1A-202ENST00000366159 BCO2Q9BYV7 579 aa14.67□□□□□ -0.06
TNFRSF1A-202ENST00000366159 SLITRK6Q9H5Y7 841 aa14.67□□□□□ -0.06
TNFRSF1A-202ENST00000366159 RIF1Q5UIP0 2472 aaKnown RBP14.67□□□□□ -0.06
TNFRSF1A-202ENST00000366159 KIF26AQ9ULI4 1882 aaPredicted RBP14.67□□□□□ -0.06
TNFRSF1A-202ENST00000366159 F5P12259 2224 aa14.67□□□□□ -0.06
TNFRSF1A-202ENST00000366159 A0A1B0GVL5 298 aa14.66□□□□□ -0.06
TNFRSF1A-202ENST00000366159 MYBPHLA2RUH7 354 aa14.66□□□□□ -0.06
TNFRSF1A-202ENST00000366159 SOBPA7XYQ1 873 aa14.66□□□□□ -0.06
TNFRSF1A-202ENST00000366159 MAN2B1O00754 1011 aa14.66□□□□□ -0.06
TNFRSF1A-202ENST00000366159 ZNF263O14978 683 aa14.66□□□□□ -0.06
TNFRSF1A-202ENST00000366159 PRAMEF12O95522 483 aa14.66□□□□□ -0.06
TNFRSF1A-202ENST00000366159 PFKFB1P16118 471 aa14.66□□□□□ -0.06
TNFRSF1A-202ENST00000366159 CYP2F1P24903 491 aa14.66□□□□□ -0.06
TNFRSF1A-202ENST00000366159 LMO2P25791 158 aa14.66□□□□□ -0.06
TNFRSF1A-202ENST00000366159 GPR15P49685 360 aa14.66□□□□□ -0.06
TNFRSF1A-202ENST00000366159 NLRP12P59046 1061 aa14.66□□□□□ -0.06
TNFRSF1A-202ENST00000366159 CLDN10P78369 228 aa14.66□□□□□ -0.06
TNFRSF1A-202ENST00000366159 CYP4F8P98187 520 aa14.66□□□□□ -0.06
TNFRSF1A-202ENST00000366159 MYO1EQ12965 1108 aa14.66□□□□□ -0.06
TNFRSF1A-202ENST00000366159 CCDC142Q17RM4 750 aa14.66□□□□□ -0.06
TNFRSF1A-202ENST00000366159 ZNF528Q3MIS6 628 aa14.66□□□□□ -0.06
TNFRSF1A-202ENST00000366159 MAMSTRQ6ZN01 415 aa14.66□□□□□ -0.06
TNFRSF1A-202ENST00000366159 CEP57L1Q8IYX8 460 aa14.66□□□□□ -0.06
TNFRSF1A-202ENST00000366159 KIAA0895Q8NCT3 520 aa14.66□□□□□ -0.06
TNFRSF1A-202ENST00000366159 PLEKHO2Q8TD55 490 aa14.66□□□□□ -0.06
TNFRSF1A-202ENST00000366159 NELL1Q92832 810 aa14.66□□□□□ -0.06
TNFRSF1A-202ENST00000366159 NKD2Q969F2 451 aaPredicted RBP14.66□□□□□ -0.06
TNFRSF1A-202ENST00000366159 FUBP3Q96I24 572 aaKnown RBP eCLIP14.66□□□□□ -0.06
TNFRSF1A-202ENST00000366159 MYRFLQ96LU7 910 aa14.66□□□□□ -0.06
TNFRSF1A-202ENST00000366159 SEMA4AQ9H3S1 761 aa14.66□□□□□ -0.06
TNFRSF1A-202ENST00000366159 DMAC2Q9NW81 257 aa14.66□□□□□ -0.06
TNFRSF1A-202ENST00000366159 FBXO4Q9UKT5 387 aa14.66□□□□□ -0.06
TNFRSF1A-202ENST00000366159 MRPS17Q9Y2R5 130 aaKnown RBP14.66□□□□□ -0.06
TNFRSF1A-202ENST00000366159 NME7Q9Y5B8 376 aa14.66□□□□□ -0.06
TNFRSF1A-202ENST00000366159 PIAS3Q9Y6X2 628 aa14.66□□□□□ -0.06
TNFRSF1A-202ENST00000366159 OBSL1O75147 1896 aa14.66□□□□□ -0.06
TNFRSF1A-202ENST00000366159 NCAM2O15394 837 aa14.66□□□□□ -0.06
TNFRSF1A-202ENST00000366159 PRPF40AO75400 957 aaKnown RBP14.66□□□□□ -0.06
TNFRSF1A-202ENST00000366159 NOL4O94818 638 aa14.66□□□□□ -0.06
TNFRSF1A-202ENST00000366159 STAU1O95793 577 aaKnown RBP14.66□□□□□ -0.06
TNFRSF1A-202ENST00000366159 FAM163BP0C2L3 166 aa14.66□□□□□ -0.06
TNFRSF1A-202ENST00000366159 CSH1P0DML2 217 aa14.66□□□□□ -0.06
TNFRSF1A-202ENST00000366159 CSH2P0DML3 217 aa14.66□□□□□ -0.06
TNFRSF1A-202ENST00000366159 WARSP23381 471 aaKnown RBP14.66□□□□□ -0.06
TNFRSF1A-202ENST00000366159 PCSK1P29120 753 aa14.66□□□□□ -0.06
TNFRSF1A-202ENST00000366159 PSMD2Q13200 908 aa14.66□□□□□ -0.06
TNFRSF1A-202ENST00000366159 DDR2Q16832 855 aa14.66□□□□□ -0.06
TNFRSF1A-202ENST00000366159 KMT5BQ4FZB7 885 aa14.66□□□□□ -0.06
TNFRSF1A-202ENST00000366159 ARHGAP15Q53QZ3 475 aa14.66□□□□□ -0.06
TNFRSF1A-202ENST00000366159 HS2ST1Q7LGA3 356 aa14.66□□□□□ -0.06
TNFRSF1A-202ENST00000366159 GPIHBP1Q8IV16 184 aa14.66□□□□□ -0.06
TNFRSF1A-202ENST00000366159 SLC9A9Q8IVB4 645 aa14.66□□□□□ -0.06
TNFRSF1A-202ENST00000366159 FAM200AQ8TCP9 573 aa14.66□□□□□ -0.06
TNFRSF1A-202ENST00000366159 TRMT2BQ96GJ1 504 aaKnown RBP14.66□□□□□ -0.06
TNFRSF1A-202ENST00000366159 KCTD10Q9H3F6 313 aa14.66□□□□□ -0.06
TNFRSF1A-202ENST00000366159 CRTAC1Q9NQ79 661 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms