RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 CCDC33Q8N5R6 958 aa11.14□□□□□ -0.63
SMC3-201ENST00000361804 TFAP2BQ92481 460 aa11.14□□□□□ -0.63
SMC3-201ENST00000361804 ZNF75CPQ92670 426 aaPredicted RBP11.14□□□□□ -0.63
SMC3-201ENST00000361804 FGD4Q96M96 766 aa11.14□□□□□ -0.63
SMC3-201ENST00000361804 RPAP3Q9H6T3 665 aaPredicted RBP11.14□□□□□ -0.63
SMC3-201ENST00000361804 CTDP1Q9Y5B0 961 aaPredicted RBP11.14□□□□□ -0.63
SMC3-201ENST00000361804 SPARCL1Q14515 664 aa11.14□□□□□ -0.63
SMC3-201ENST00000361804 CRYMQ14894 314 aa11.14□□□□□ -0.63
SMC3-201ENST00000361804 BBS9Q3SYG4 887 aa11.14□□□□□ -0.63
SMC3-201ENST00000361804 PLEKHA7Q6IQ23 1121 aa11.14□□□□□ -0.63
SMC3-201ENST00000361804 DSTYKQ6XUX3 929 aa11.14□□□□□ -0.63
SMC3-201ENST00000361804 ALLCQ8N6M5 410 aa11.14□□□□□ -0.63
SMC3-201ENST00000361804 EXD1Q8NHP7 514 aa11.14□□□□□ -0.63
SMC3-201ENST00000361804 JOSD2Q8TAC2 188 aa11.14□□□□□ -0.63
SMC3-201ENST00000361804 TCP10LQ8TDR4 215 aa11.14□□□□□ -0.63
SMC3-201ENST00000361804 VTI1AQ96AJ9 217 aa11.14□□□□□ -0.63
SMC3-201ENST00000361804 NUDCD1Q96RS6 583 aa11.14□□□□□ -0.63
SMC3-201ENST00000361804 IWS1Q96ST2 819 aa11.14□□□□□ -0.63
SMC3-201ENST00000361804 MTMR12Q9C0I1 747 aa11.14□□□□□ -0.63
SMC3-201ENST00000361804 YIPF3Q9GZM5 350 aa11.14□□□□□ -0.63
SMC3-201ENST00000361804 CYP26B1Q9NR63 512 aa11.14□□□□□ -0.63
SMC3-201ENST00000361804 RNF146Q9NTX7 359 aa11.14□□□□□ -0.63
SMC3-201ENST00000361804 EME2A4GXA9 379 aaPredicted RBP11.14□□□□□ -0.63
SMC3-201ENST00000361804 CFAP69A5D8W1 941 aa11.14□□□□□ -0.63
SMC3-201ENST00000361804 PMM2O15305 246 aa11.14□□□□□ -0.63
SMC3-201ENST00000361804 PSTPIP1O43586 416 aa11.14□□□□□ -0.63
SMC3-201ENST00000361804 TCEA3O75764 348 aa11.14□□□□□ -0.63
SMC3-201ENST00000361804 CTCFP49711 727 aaPredicted RBP11.14□□□□□ -0.63
SMC3-201ENST00000361804 SETDB1Q15047 1291 aa11.14□□□□□ -0.63
SMC3-201ENST00000361804 RNASEH2BQ5TBB1 312 aaKnown RBP11.14□□□□□ -0.63
SMC3-201ENST00000361804 DPH6Q7L8W6 267 aa11.14□□□□□ -0.63
SMC3-201ENST00000361804 NLRP9Q7RTR0 991 aa11.14□□□□□ -0.63
SMC3-201ENST00000361804 GBP7Q8N8V2 638 aaPredicted RBP11.14□□□□□ -0.63
SMC3-201ENST00000361804 CFAP57Q96MR6 1250 aa11.14□□□□□ -0.63
SMC3-201ENST00000361804 SENP7Q9BQF6 1050 aa11.14□□□□□ -0.63
SMC3-201ENST00000361804 TRIM6Q9C030 488 aaPredicted RBP11.14□□□□□ -0.63
SMC3-201ENST00000361804 GINM1Q9NU53 330 aa11.14□□□□□ -0.63
SMC3-201ENST00000361804 ARMCX1Q9P291 453 aa11.14□□□□□ -0.63
SMC3-201ENST00000361804 HACL1Q9UJ83 578 aa11.14□□□□□ -0.63
SMC3-201ENST00000361804 CHMP2BQ9UQN3 213 aa11.14□□□□□ -0.63
SMC3-201ENST00000361804 XIRP2A4UGR9 3374 aa11.13□□□□□ -0.63
SMC3-201ENST00000361804 VWA5AO00534 786 aa11.13□□□□□ -0.63
SMC3-201ENST00000361804 TMEM63AO94886 807 aa11.13□□□□□ -0.63
SMC3-201ENST00000361804 MYL6P60660 151 aa11.13□□□□□ -0.63
SMC3-201ENST00000361804 TRAF1Q13077 416 aa11.13□□□□□ -0.63
SMC3-201ENST00000361804 NPNTQ6UXI9 565 aa11.13□□□□□ -0.63
SMC3-201ENST00000361804 CCDC125Q86Z20 511 aa11.13□□□□□ -0.63
SMC3-201ENST00000361804 WDTC1Q8N5D0 677 aa11.13□□□□□ -0.63
SMC3-201ENST00000361804 ACTL9Q8TC94 416 aa11.13□□□□□ -0.63
SMC3-201ENST00000361804 DTX3LQ8TDB6 740 aa11.13□□□□□ -0.63
SMC3-201ENST00000361804 MSTO1Q9BUK6 570 aa11.13□□□□□ -0.63
SMC3-201ENST00000361804 EXTL3O43909 919 aa11.13□□□□□ -0.63
SMC3-201ENST00000361804 TYROBPO43914 113 aa11.13□□□□□ -0.63
SMC3-201ENST00000361804 KCNA2P16389 499 aa11.13□□□□□ -0.63
SMC3-201ENST00000361804 OTUD4Q01804 1114 aaKnown RBP11.13□□□□□ -0.63
SMC3-201ENST00000361804 TMEM132BQ14DG7 1078 aa11.13□□□□□ -0.63
SMC3-201ENST00000361804 EAPPQ56P03 285 aaPredicted RBP11.13□□□□□ -0.63
SMC3-201ENST00000361804 C3orf62Q6ZUJ4 267 aa11.13□□□□□ -0.63
SMC3-201ENST00000361804 UNC45BQ8IWX7 931 aa11.13□□□□□ -0.63
SMC3-201ENST00000361804 SAMD3Q8N6K7 520 aa11.13□□□□□ -0.63
SMC3-201ENST00000361804 ARFGAP1Q8N6T3 406 aa11.13□□□□□ -0.63
SMC3-201ENST00000361804 ARL8BQ9NVJ2 186 aa11.13□□□□□ -0.63
SMC3-201ENST00000361804 TRIP11Q15643 1979 aa11.13□□□□□ -0.63
SMC3-201ENST00000361804 TMEM191CA6NGB0 347 aa11.13□□□□□ -0.63
SMC3-201ENST00000361804 GJB1P08034 283 aa11.13□□□□□ -0.63
SMC3-201ENST00000361804 ASNSP08243 561 aa11.13□□□□□ -0.63
SMC3-201ENST00000361804 TMEM191BP0C7N4 346 aa11.13□□□□□ -0.63
SMC3-201ENST00000361804 RFC1P35251 1148 aaPredicted RBP11.13□□□□□ -0.63
SMC3-201ENST00000361804 ACTR2P61160 394 aa11.13□□□□□ -0.63
SMC3-201ENST00000361804 CAV1Q03135 178 aa11.13□□□□□ -0.63
SMC3-201ENST00000361804 NCOA4Q13772 614 aa11.13□□□□□ -0.63
SMC3-201ENST00000361804 PDK4Q16654 411 aa11.13□□□□□ -0.63
SMC3-201ENST00000361804 KHDC1Q4VXA5 237 aaKnown RBP11.13□□□□□ -0.63
SMC3-201ENST00000361804 SH3PXD2AQ5TCZ1 1133 aa11.13□□□□□ -0.63
SMC3-201ENST00000361804 FAXCQ5TGI0 409 aa11.13□□□□□ -0.63
SMC3-201ENST00000361804 GPAT2Q6NUI2 795 aa11.13□□□□□ -0.63
SMC3-201ENST00000361804 SYDE1Q6ZW31 735 aaPredicted RBP11.13□□□□□ -0.63
SMC3-201ENST00000361804 APBB1IPQ7Z5R6 666 aaPredicted RBP11.13□□□□□ -0.63
SMC3-201ENST00000361804 FBXO36Q8NEA4 188 aa11.13□□□□□ -0.63
SMC3-201ENST00000361804 CNKSR2Q8WXI2 1034 aa11.13□□□□□ -0.63
SMC3-201ENST00000361804 VPS33BQ9H267 617 aa11.13□□□□□ -0.63
SMC3-201ENST00000361804 ANKEF1Q9NU02 776 aa11.13□□□□□ -0.63
SMC3-201ENST00000361804 ARHGAP28Q9P2N2 729 aa11.13□□□□□ -0.63
SMC3-201ENST00000361804 USH1CQ9Y6N9 552 aa11.13□□□□□ -0.63
SMC3-201ENST00000361804 hCG_1818297A0A087WSY0 165 aa11.12□□□□□ -0.63
SMC3-201ENST00000361804 MAN1A1P33908 653 aa11.12□□□□□ -0.63
SMC3-201ENST00000361804 JAK3P52333 1124 aa11.12□□□□□ -0.63
SMC3-201ENST00000361804 KRT76Q01546 638 aa11.12□□□□□ -0.63
SMC3-201ENST00000361804 NR1H3Q13133 447 aa11.12□□□□□ -0.63
SMC3-201ENST00000361804 EMC2Q15006 297 aa11.12□□□□□ -0.63
SMC3-201ENST00000361804 FAM71DQ8N9W8 422 aa11.12□□□□□ -0.63
SMC3-201ENST00000361804 SHKBP1Q8TBC3 707 aa11.12□□□□□ -0.63
SMC3-201ENST00000361804 PAFAH2Q99487 392 aa11.12□□□□□ -0.63
SMC3-201ENST00000361804 MECRQ9BV79 373 aa11.12□□□□□ -0.63
SMC3-201ENST00000361804 CYTH4Q9UIA0 394 aa11.12□□□□□ -0.63
SMC3-201ENST00000361804 RABGEF1Q9UJ41 708 aa11.12□□□□□ -0.63
SMC3-201ENST00000361804 ZFP69BQ9UJL9 534 aa11.12□□□□□ -0.63
SMC3-201ENST00000361804 STARD13Q9Y3M8 1113 aa11.12□□□□□ -0.63
SMC3-201ENST00000361804 E5RJQ4 531 aa11.12□□□□□ -0.63
SMC3-201ENST00000361804 CST8O60676 142 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms