RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 RPP40O75818 363 aaKnown RBP22.76■■□□□ 1.23
CD47-202ENST00000361309 GPR15P49685 360 aa22.76■■□□□ 1.23
CD47-202ENST00000361309 RABEP1Q15276 862 aa22.76■■□□□ 1.23
CD47-202ENST00000361309 SV2CQ496J9 727 aa22.76■■□□□ 1.23
CD47-202ENST00000361309 TXNDC8Q6A555 127 aa22.76■■□□□ 1.23
CD47-202ENST00000361309 IL31Q6EBC2 164 aa22.76■■□□□ 1.23
CD47-202ENST00000361309 CRELD2Q6UXH1 353 aaPredicted RBP22.76■■□□□ 1.23
CD47-202ENST00000361309 CACNA2D4Q7Z3S7 1137 aa22.76■■□□□ 1.23
CD47-202ENST00000361309 KBTBD6Q86V97 674 aa22.76■■□□□ 1.23
CD47-202ENST00000361309 LARP4BQ92615 738 aaKnown RBP22.76■■□□□ 1.23
CD47-202ENST00000361309 LOXL4Q96JB6 756 aa22.76■■□□□ 1.23
CD47-202ENST00000361309 ST6GALNAC4Q9H4F1 302 aa22.76■■□□□ 1.23
CD47-202ENST00000361309 TDP1Q9NUW8 608 aa22.76■■□□□ 1.23
CD47-202ENST00000361309 SLC8A2Q9UPR5 921 aa22.76■■□□□ 1.23
CD47-202ENST00000361309 CCDC163A0A0D9SF12 145 aa22.75■■□□□ 1.23
CD47-202ENST00000361309 ATG13O75143 517 aa22.75■■□□□ 1.23
CD47-202ENST00000361309 EGFP01133 1207 aa22.75■■□□□ 1.23
CD47-202ENST00000361309 CCDC192P0DO97 292 aa22.75■■□□□ 1.23
CD47-202ENST00000361309 ARSAP15289 507 aa22.75■■□□□ 1.23
CD47-202ENST00000361309 DDX6P26196 483 aaKnown RBP eCLIP22.75■■□□□ 1.23
CD47-202ENST00000361309 LONP1P36776 959 aaKnown RBP22.75■■□□□ 1.23
CD47-202ENST00000361309 RAP1GAPP47736 663 aa22.75■■□□□ 1.23
CD47-202ENST00000361309 ST3GAL2Q16842 350 aa22.75■■□□□ 1.23
CD47-202ENST00000361309 SDHAF4Q5VUM1 108 aa22.75■■□□□ 1.23
CD47-202ENST00000361309 C12orf50Q8NA57 414 aaPredicted RBP22.75■■□□□ 1.23
CD47-202ENST00000361309 RIN3Q8TB24 985 aa22.75■■□□□ 1.23
CD47-202ENST00000361309 POMGNT1Q8WZA1 660 aa22.75■■□□□ 1.23
CD47-202ENST00000361309 DDX1Q92499 740 aaKnown RBP22.75■■□□□ 1.23
CD47-202ENST00000361309 PI4K2AQ9BTU6 479 aa22.75■■□□□ 1.23
CD47-202ENST00000361309 KIF9Q9HAQ2 790 aa22.75■■□□□ 1.23
CD47-202ENST00000361309 POLR3BQ9NW08 1133 aaPredicted RBP22.75■■□□□ 1.23
CD47-202ENST00000361309 MAGED2Q9UNF1 606 aaPredicted RBP22.75■■□□□ 1.23
CD47-202ENST00000361309 HELZP42694 1942 aaKnown RBP22.74■■□□□ 1.23
CD47-202ENST00000361309 NUP205Q92621 2012 aa22.74■■□□□ 1.23
CD47-202ENST00000361309 TULP1O00294 542 aaPredicted RBP22.74■■□□□ 1.23
CD47-202ENST00000361309 RNF40O75150 1001 aa22.74■■□□□ 1.23
CD47-202ENST00000361309 PRPF40AO75400 957 aaKnown RBP22.74■■□□□ 1.23
CD47-202ENST00000361309 EPN2O95208 641 aa22.74■■□□□ 1.23
CD47-202ENST00000361309 ZNF806P0C7X5 589 aa22.74■■□□□ 1.23
CD47-202ENST00000361309 ADSSP30520 456 aa22.74■■□□□ 1.23
CD47-202ENST00000361309 TSPY1Q01534 308 aa22.74■■□□□ 1.23
CD47-202ENST00000361309 POU5F1Q01860 360 aaKnown RBP22.74■■□□□ 1.23
CD47-202ENST00000361309 C8orf34Q49A92 452 aa22.74■■□□□ 1.23
CD47-202ENST00000361309 CC2D1AQ6P1N0 951 aaPredicted RBP22.74■■□□□ 1.23
CD47-202ENST00000361309 ZNF720Q7Z2F6 126 aa22.74■■□□□ 1.23
CD47-202ENST00000361309 KRI1Q8N9T8 703 aaKnown RBP22.74■■□□□ 1.23
CD47-202ENST00000361309 MRPS31Q92665 395 aaKnown RBP22.74■■□□□ 1.23
CD47-202ENST00000361309 CHAMP1Q96JM3 812 aa22.74■■□□□ 1.23
CD47-202ENST00000361309 ZNF560Q96MR9 790 aa22.74■■□□□ 1.23
CD47-202ENST00000361309 FBRSL1Q9HCM7 1045 aaKnown RBP22.74■■□□□ 1.23
CD47-202ENST00000361309 RXFP3Q9NSD7 469 aa22.74■■□□□ 1.23
CD47-202ENST00000361309 IL18RAPO95256 599 aa22.73■■□□□ 1.23
CD47-202ENST00000361309 CSH1P0DML2 217 aa22.73■■□□□ 1.23
CD47-202ENST00000361309 CSH2P0DML3 217 aa22.73■■□□□ 1.23
CD47-202ENST00000361309 DDIT3P35638 169 aa22.73■■□□□ 1.23
CD47-202ENST00000361309 GALK1P51570 392 aa22.73■■□□□ 1.23
CD47-202ENST00000361309 LIMK1P53667 647 aa22.73■■□□□ 1.23
CD47-202ENST00000361309 MON1AQ86VX9 555 aa22.73■■□□□ 1.23
CD47-202ENST00000361309 SFR1Q86XK3 245 aa22.73■■□□□ 1.23
CD47-202ENST00000361309 SOBPA7XYQ1 873 aa22.72■■□□□ 1.23
CD47-202ENST00000361309 CD2BP2O95400 341 aaKnown RBP22.72■■□□□ 1.23
CD47-202ENST00000361309 BMP15O95972 392 aa22.72■■□□□ 1.23
CD47-202ENST00000361309 WNT7BP56706 349 aa22.72■■□□□ 1.23
CD47-202ENST00000361309 AMPD2Q01433 879 aa22.72■■□□□ 1.23
CD47-202ENST00000361309 POSTNQ15063 836 aa22.72■■□□□ 1.23
CD47-202ENST00000361309 NFE2Q16621 373 aaPredicted RBP22.72■■□□□ 1.23
CD47-202ENST00000361309 NAIF1Q69YI7 327 aaPredicted RBP22.72■■□□□ 1.23
CD47-202ENST00000361309 DYMQ7RTS9 669 aa22.72■■□□□ 1.23
CD47-202ENST00000361309 NT5DC4Q86YG4 428 aa22.72■■□□□ 1.23
CD47-202ENST00000361309 PDCL2Q8N4E4 241 aa22.72■■□□□ 1.23
CD47-202ENST00000361309 ABCA7Q8IZY2 2146 aa22.72■■□□□ 1.23
CD47-202ENST00000361309 TADA3O75528 432 aa22.71■■□□□ 1.23
CD47-202ENST00000361309 PPP1R37O75864 691 aa22.71■■□□□ 1.23
CD47-202ENST00000361309 DRD1P21728 446 aa22.71■■□□□ 1.23
CD47-202ENST00000361309 CYP2F1P24903 491 aa22.71■■□□□ 1.23
CD47-202ENST00000361309 POLR2BP30876 1174 aaKnown RBP22.71■■□□□ 1.23
CD47-202ENST00000361309 PNPLA4P41247 253 aa22.71■■□□□ 1.23
CD47-202ENST00000361309 TFAMQ00059 246 aaKnown RBP22.71■■□□□ 1.23
CD47-202ENST00000361309 ZNF268Q14587 947 aaPredicted RBP22.71■■□□□ 1.23
CD47-202ENST00000361309 PDGFRLQ15198 375 aa22.71■■□□□ 1.23
CD47-202ENST00000361309 SF3A1Q15459 793 aaKnown RBP22.71■■□□□ 1.23
CD47-202ENST00000361309 DDR2Q16832 855 aa22.71■■□□□ 1.23
CD47-202ENST00000361309 LARP1BQ659C4 914 aaKnown RBP22.71■■□□□ 1.23
CD47-202ENST00000361309 CAMKK1Q8N5S9 505 aa22.71■■□□□ 1.23
CD47-202ENST00000361309 ZSWIM2Q8NEG5 633 aa22.71■■□□□ 1.23
CD47-202ENST00000361309 LEO1Q8WVC0 666 aaPredicted RBP22.71■■□□□ 1.23
CD47-202ENST00000361309 HVCN1Q96D96 273 aa22.71■■□□□ 1.23
CD47-202ENST00000361309 HHIPQ96QV1 700 aa22.71■■□□□ 1.23
CD47-202ENST00000361309 P2RY13Q9BPV8 354 aa22.71■■□□□ 1.23
CD47-202ENST00000361309 FAM213AQ9BRX8 229 aa22.71■■□□□ 1.23
CD47-202ENST00000361309 SMOC1Q9H4F8 434 aa22.71■■□□□ 1.23
CD47-202ENST00000361309 DDX43Q9NXZ2 648 aaKnown RBP22.71■■□□□ 1.23
CD47-202ENST00000361309 L1RE1Q9UN81 338 aa22.71■■□□□ 1.23
CD47-202ENST00000361309 AGAP1Q9UPQ3 857 aa22.71■■□□□ 1.23
CD47-202ENST00000361309 SMC3Q9UQE7 1217 aa22.71■■□□□ 1.23
CD47-202ENST00000361309 CFAP47Q6ZTR5 3102 aa22.71■■□□□ 1.23
CD47-202ENST00000361309 THADAQ6YHU6 1953 aa22.7■■□□□ 1.23
CD47-202ENST00000361309 TM4SF5O14894 197 aa22.7■■□□□ 1.22
CD47-202ENST00000361309 AKAP3O75969 853 aa22.7■■□□□ 1.22
CD47-202ENST00000361309 ITGB3P05106 788 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms