RNA–Protein interactions for RNA: ENST00000360688.3

GDPD3-201, Transcript of glycerophosphodiester phosphodiesterase domain containing 3, humanhuman

TSL 1 (best)

Gene GDPD3, Length 1,306 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD3-201ENST00000360688 NT5DC4Q86YG4 428 aa16.21■□□□□ 0.19
GDPD3-201ENST00000360688 MAB21L3Q8N8X9 362 aa16.21■□□□□ 0.19
GDPD3-201ENST00000360688 USP13Q92995 863 aaPredicted RBP16.21■□□□□ 0.19
GDPD3-201ENST00000360688 HVCN1Q96D96 273 aa16.21■□□□□ 0.19
GDPD3-201ENST00000360688 CHFRQ96EP1 664 aa16.21■□□□□ 0.19
GDPD3-201ENST00000360688 EPSTI1Q96J88 318 aa16.21■□□□□ 0.19
GDPD3-201ENST00000360688 STRA6Q9BX79 667 aa16.21■□□□□ 0.19
GDPD3-201ENST00000360688 ANAPC1Q9H1A4 1944 aa16.21■□□□□ 0.19
GDPD3-201ENST00000360688 OTOL1A6NHN0 477 aaPredicted RBP16.2■□□□□ 0.18
GDPD3-201ENST00000360688 GPR15P49685 360 aa16.2■□□□□ 0.18
GDPD3-201ENST00000360688 WNT7BP56706 349 aa16.2■□□□□ 0.18
GDPD3-201ENST00000360688 KCNA1Q09470 495 aa16.2■□□□□ 0.18
GDPD3-201ENST00000360688 POSTNQ15063 836 aa16.2■□□□□ 0.18
GDPD3-201ENST00000360688 TMEM196Q5HYL7 178 aa16.2■□□□□ 0.18
GDPD3-201ENST00000360688 TXNDC8Q6A555 127 aa16.2■□□□□ 0.18
GDPD3-201ENST00000360688 TRIM68Q6AZZ1 485 aa16.2■□□□□ 0.18
GDPD3-201ENST00000360688 FSTL4Q6MZW2 842 aa16.2■□□□□ 0.18
GDPD3-201ENST00000360688 STKLD1Q8NE28 680 aa16.2■□□□□ 0.18
GDPD3-201ENST00000360688 RIN3Q8TB24 985 aa16.2■□□□□ 0.18
GDPD3-201ENST00000360688 ZNF560Q96MR9 790 aa16.2■□□□□ 0.18
GDPD3-201ENST00000360688 EBF3Q9H4W6 596 aa16.2■□□□□ 0.18
GDPD3-201ENST00000360688 TDP1Q9NUW8 608 aa16.2■□□□□ 0.18
GDPD3-201ENST00000360688 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.2■□□□□ 0.18
GDPD3-201ENST00000360688 MYO16Q9Y6X6 1858 aa16.2■□□□□ 0.18
GDPD3-201ENST00000360688 TRDMT1O14717 391 aaKnown RBP16.19■□□□□ 0.18
GDPD3-201ENST00000360688 FOXD2O60548 495 aaPredicted RBP16.19■□□□□ 0.18
GDPD3-201ENST00000360688 PRPF40AO75400 957 aaKnown RBP16.19■□□□□ 0.18
GDPD3-201ENST00000360688 CSH1P0DML2 217 aa16.19■□□□□ 0.18
GDPD3-201ENST00000360688 CSH2P0DML3 217 aa16.19■□□□□ 0.18
GDPD3-201ENST00000360688 DDX6P26196 483 aaKnown RBP eCLIP16.19■□□□□ 0.18
GDPD3-201ENST00000360688 PNPLA4P41247 253 aa16.19■□□□□ 0.18
GDPD3-201ENST00000360688 PXNP49023 591 aaPredicted RBP16.19■□□□□ 0.18
GDPD3-201ENST00000360688 TSPY1Q01534 308 aa16.19■□□□□ 0.18
GDPD3-201ENST00000360688 BFSP1Q12934 665 aa16.19■□□□□ 0.18
GDPD3-201ENST00000360688 NFE2Q16621 373 aaPredicted RBP16.19■□□□□ 0.18
GDPD3-201ENST00000360688 PPM1JQ5JR12 505 aa16.19■□□□□ 0.18
GDPD3-201ENST00000360688 SDHAF4Q5VUM1 108 aa16.19■□□□□ 0.18
GDPD3-201ENST00000360688 PDCL2Q8N4E4 241 aa16.19■□□□□ 0.18
GDPD3-201ENST00000360688 ZSWIM2Q8NEG5 633 aa16.19■□□□□ 0.18
GDPD3-201ENST00000360688 FAM213AQ9BRX8 229 aa16.19■□□□□ 0.18
GDPD3-201ENST00000360688 PI4K2AQ9BTU6 479 aa16.19■□□□□ 0.18
GDPD3-201ENST00000360688 MRPL44Q9H9J2 332 aaKnown RBP16.19■□□□□ 0.18
GDPD3-201ENST00000360688 KIF9Q9HAQ2 790 aa16.19■□□□□ 0.18
GDPD3-201ENST00000360688 SEL1LQ9UBV2 794 aa16.19■□□□□ 0.18
GDPD3-201ENST00000360688 STK17AQ9UEE5 414 aa16.19■□□□□ 0.18
GDPD3-201ENST00000360688 MAGED2Q9UNF1 606 aaPredicted RBP16.19■□□□□ 0.18
GDPD3-201ENST00000360688 CCDC163A0A0D9SF12 145 aa16.19■□□□□ 0.18
GDPD3-201ENST00000360688 MYMKA6NI61 221 aa16.19■□□□□ 0.18
GDPD3-201ENST00000360688 SOBPA7XYQ1 873 aa16.19■□□□□ 0.18
GDPD3-201ENST00000360688 ITGB3P05106 788 aa16.19■□□□□ 0.18
GDPD3-201ENST00000360688 ARSAP15289 507 aa16.19■□□□□ 0.18
GDPD3-201ENST00000360688 POLR2BP30876 1174 aaKnown RBP16.19■□□□□ 0.18
GDPD3-201ENST00000360688 TFAMQ00059 246 aaKnown RBP16.19■□□□□ 0.18
GDPD3-201ENST00000360688 GRSF1Q12849 480 aaKnown RBP eCLIP16.19■□□□□ 0.18
GDPD3-201ENST00000360688 L1TD1Q5T7N2 865 aaKnown RBP16.19■□□□□ 0.18
GDPD3-201ENST00000360688 SCARA3Q6AZY7 606 aa16.19■□□□□ 0.18
GDPD3-201ENST00000360688 MON1AQ86VX9 555 aa16.19■□□□□ 0.18
GDPD3-201ENST00000360688 BRSK2Q8IWQ3 736 aa16.19■□□□□ 0.18
GDPD3-201ENST00000360688 C1orf127Q8N9H9 656 aa16.19■□□□□ 0.18
GDPD3-201ENST00000360688 LEO1Q8WVC0 666 aaPredicted RBP16.19■□□□□ 0.18
GDPD3-201ENST00000360688 GAB3Q8WWW8 586 aa16.19■□□□□ 0.18
GDPD3-201ENST00000360688 MRPS31Q92665 395 aaKnown RBP16.19■□□□□ 0.18
GDPD3-201ENST00000360688 DNAJC19Q96DA6 116 aa16.19■□□□□ 0.18
GDPD3-201ENST00000360688 SAAL1Q96ER3 474 aa16.19■□□□□ 0.18
GDPD3-201ENST00000360688 ACBD6Q9BR61 282 aa16.19■□□□□ 0.18
GDPD3-201ENST00000360688 TBC1D7Q9P0N9 293 aa16.19■□□□□ 0.18
GDPD3-201ENST00000360688 L1RE1Q9UN81 338 aa16.19■□□□□ 0.18
GDPD3-201ENST00000360688 AGAP1Q9UPQ3 857 aa16.19■□□□□ 0.18
GDPD3-201ENST00000360688 KIAA1549LQ6ZVL6 1849 aa16.18■□□□□ 0.18
GDPD3-201ENST00000360688 AXIN1O15169 862 aa16.18■□□□□ 0.18
GDPD3-201ENST00000360688 ATG13O75143 517 aa16.18■□□□□ 0.18
GDPD3-201ENST00000360688 TADA3O75528 432 aa16.18■□□□□ 0.18
GDPD3-201ENST00000360688 EGFP01133 1207 aa16.18■□□□□ 0.18
GDPD3-201ENST00000360688 ACAT1P24752 427 aaKnown RBP16.18■□□□□ 0.18
GDPD3-201ENST00000360688 CYP2F1P24903 491 aa16.18■□□□□ 0.18
GDPD3-201ENST00000360688 ZNF268Q14587 947 aaPredicted RBP16.18■□□□□ 0.18
GDPD3-201ENST00000360688 DDR2Q16832 855 aa16.18■□□□□ 0.18
GDPD3-201ENST00000360688 CXorf38Q8TB03 319 aa16.18■□□□□ 0.18
GDPD3-201ENST00000360688 ACCSQ96QU6 501 aa16.18■□□□□ 0.18
GDPD3-201ENST00000360688 PKMYT1Q99640 499 aa16.18■□□□□ 0.18
GDPD3-201ENST00000360688 ARRDC1-AS1Q9H2J1 176 aa16.18■□□□□ 0.18
GDPD3-201ENST00000360688 FBRSL1Q9HCM7 1045 aaKnown RBP16.18■□□□□ 0.18
GDPD3-201ENST00000360688 ABCB6Q9NP58 842 aa16.18■□□□□ 0.18
GDPD3-201ENST00000360688 DDX43Q9NXZ2 648 aaKnown RBP16.18■□□□□ 0.18
GDPD3-201ENST00000360688 CCDC39Q9UFE4 941 aa16.18■□□□□ 0.18
GDPD3-201ENST00000360688 EXOC7Q9UPT5 735 aa16.18■□□□□ 0.18
GDPD3-201ENST00000360688 CLIC4Q9Y696 253 aa16.18■□□□□ 0.18
GDPD3-201ENST00000360688 HELZP42694 1942 aaKnown RBP16.17■□□□□ 0.18
GDPD3-201ENST00000360688 TULP1O00294 542 aaPredicted RBP16.17■□□□□ 0.18
GDPD3-201ENST00000360688 HUS1O60921 280 aa16.17■□□□□ 0.18
GDPD3-201ENST00000360688 RNF40O75150 1001 aa16.17■□□□□ 0.18
GDPD3-201ENST00000360688 RPP40O75818 363 aaKnown RBP16.17■□□□□ 0.18
GDPD3-201ENST00000360688 KRT37O76014 449 aa16.17■□□□□ 0.18
GDPD3-201ENST00000360688 NOL4O94818 638 aa16.17■□□□□ 0.18
GDPD3-201ENST00000360688 GAP43P17677 238 aa16.17■□□□□ 0.18
GDPD3-201ENST00000360688 GARTP22102 1010 aa16.17■□□□□ 0.18
GDPD3-201ENST00000360688 RAP1GAPP47736 663 aa16.17■□□□□ 0.18
GDPD3-201ENST00000360688 GALK1P51570 392 aa16.17■□□□□ 0.18
GDPD3-201ENST00000360688 CASP5P51878 434 aa16.17■□□□□ 0.18
GDPD3-201ENST00000360688 RPL10AP62906 217 aaKnown RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms