RNA–Protein interactions for RNA: ENST00000359238.6

SNX11-201, Transcript of sorting nexin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX11, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-201ENST00000359238 PHLDB2Q86SQ0 1253 aa19.67■□□□□ 0.74
SNX11-201ENST00000359238 PDZD7Q9H5P4 517 aa19.67■□□□□ 0.74
SNX11-201ENST00000359238 C6orf222P0C671 652 aaPredicted RBP19.67■□□□□ 0.74
SNX11-201ENST00000359238 LINGO3P0C6S8 592 aa19.67■□□□□ 0.74
SNX11-201ENST00000359238 TMEM253P0C7T8 217 aa19.67■□□□□ 0.74
SNX11-201ENST00000359238 ITGA4P13612 1032 aa19.67■□□□□ 0.74
SNX11-201ENST00000359238 ELNP15502 786 aa19.67■□□□□ 0.74
SNX11-201ENST00000359238 PHKA2P46019 1235 aa19.67■□□□□ 0.74
SNX11-201ENST00000359238 TFAMQ00059 246 aaKnown RBP19.67■□□□□ 0.74
SNX11-201ENST00000359238 MFSD14CQ5VZR4 134 aa19.67■□□□□ 0.74
SNX11-201ENST00000359238 GBP7Q8N8V2 638 aaPredicted RBP19.67■□□□□ 0.74
SNX11-201ENST00000359238 ZNF784Q8NCA9 323 aaPredicted RBP19.67■□□□□ 0.74
SNX11-201ENST00000359238 BTBD6Q96KE9 485 aa19.67■□□□□ 0.74
SNX11-201ENST00000359238 EPB41L4BQ9H329 900 aa19.67■□□□□ 0.74
SNX11-201ENST00000359238 RNF19AQ9NV58 838 aa19.67■□□□□ 0.74
SNX11-201ENST00000359238 RNF186Q9NXI6 227 aa19.67■□□□□ 0.74
SNX11-201ENST00000359238 NCANO14594 1321 aa19.66■□□□□ 0.74
SNX11-201ENST00000359238 OAS1P00973 400 aaKnown RBP19.66■□□□□ 0.74
SNX11-201ENST00000359238 NFICP08651 508 aa19.66■□□□□ 0.74
SNX11-201ENST00000359238 VIMP08670 466 aaKnown RBP19.66■□□□□ 0.74
SNX11-201ENST00000359238 POU5F1Q01860 360 aaKnown RBP19.66■□□□□ 0.74
SNX11-201ENST00000359238 TEX9Q8N6V9 391 aa19.66■□□□□ 0.74
SNX11-201ENST00000359238 RAB17Q9H0T7 212 aa19.66■□□□□ 0.74
SNX11-201ENST00000359238 DPH5Q9H2P9 285 aa19.66■□□□□ 0.74
SNX11-201ENST00000359238 TNFSF13BQ9Y275 285 aa19.66■□□□□ 0.74
SNX11-201ENST00000359238 SNX3O60493 162 aa19.65■□□□□ 0.74
SNX11-201ENST00000359238 PGK1P00558 417 aa19.65■□□□□ 0.74
SNX11-201ENST00000359238 CDC25CP30307 473 aa19.65■□□□□ 0.74
SNX11-201ENST00000359238 PSEN2P49810 448 aa19.65■□□□□ 0.74
SNX11-201ENST00000359238 ENPEPQ07075 957 aa19.65■□□□□ 0.74
SNX11-201ENST00000359238 CUL2Q13617 745 aa19.65■□□□□ 0.74
SNX11-201ENST00000359238 ANKRD20A2Q5SQ80 823 aa19.65■□□□□ 0.74
SNX11-201ENST00000359238 ANKRD20A1Q5TYW2 823 aa19.65■□□□□ 0.74
SNX11-201ENST00000359238 ANKRD20A3Q5VUR7 823 aa19.65■□□□□ 0.74
SNX11-201ENST00000359238 SLFN11Q7Z7L1 901 aa19.65■□□□□ 0.74
SNX11-201ENST00000359238 DAAM2Q86T65 1068 aa19.65■□□□□ 0.74
SNX11-201ENST00000359238 ERICH1Q86X53 443 aa19.65■□□□□ 0.74
SNX11-201ENST00000359238 PRMT1Q99873 361 aaKnown RBP19.65■□□□□ 0.74
SNX11-201ENST00000359238 ARHGEF3Q9NR81 526 aa19.65■□□□□ 0.74
SNX11-201ENST00000359238 ZFATQ9P243 1243 aa19.65■□□□□ 0.74
SNX11-201ENST00000359238 STXBP5LQ9Y2K9 1186 aa19.65■□□□□ 0.74
SNX11-201ENST00000359238 DAAM1Q9Y4D1 1078 aa19.65■□□□□ 0.74
SNX11-201ENST00000359238 ANKRD62A6NC57 917 aa19.65■□□□□ 0.74
SNX11-201ENST00000359238 AGTP01019 485 aa19.65■□□□□ 0.74
SNX11-201ENST00000359238 SHBGP04278 402 aa19.65■□□□□ 0.74
SNX11-201ENST00000359238 ATP2A2P16615 1042 aaKnown RBP19.65■□□□□ 0.74
SNX11-201ENST00000359238 PDE6CP51160 858 aa19.65■□□□□ 0.74
SNX11-201ENST00000359238 COPS2P61201 443 aa19.65■□□□□ 0.74
SNX11-201ENST00000359238 CDR2Q01850 454 aa19.65■□□□□ 0.74
SNX11-201ENST00000359238 BNIP1Q12981 228 aa19.65■□□□□ 0.74
SNX11-201ENST00000359238 TMEM270Q6UE05 265 aa19.65■□□□□ 0.74
SNX11-201ENST00000359238 CROCCP2Q86T23 111 aa19.65■□□□□ 0.74
SNX11-201ENST00000359238 NT5DC3Q86UY8 548 aa19.65■□□□□ 0.74
SNX11-201ENST00000359238 CTNNBL1Q8WYA6 563 aaPredicted RBP19.65■□□□□ 0.74
SNX11-201ENST00000359238 RFFLQ8WZ73 363 aa19.65■□□□□ 0.74
SNX11-201ENST00000359238 YIPF3Q9GZM5 350 aa19.65■□□□□ 0.74
SNX11-201ENST00000359238 PABPC3Q9H361 631 aaKnown RBP19.65■□□□□ 0.74
SNX11-201ENST00000359238 TSPAN1O60635 241 aa19.64■□□□□ 0.74
SNX11-201ENST00000359238 ABL2P42684 1182 aa19.64■□□□□ 0.74
SNX11-201ENST00000359238 WDR44Q5JSH3 913 aa19.64■□□□□ 0.74
SNX11-201ENST00000359238 WDR49Q8IV35 697 aa19.64■□□□□ 0.74
SNX11-201ENST00000359238 PRCCQ92733 491 aaPredicted RBP19.64■□□□□ 0.74
SNX11-201ENST00000359238 KLHL29Q96CT2 875 aa19.64■□□□□ 0.74
SNX11-201ENST00000359238 NFKBIZQ9BYH8 718 aa19.64■□□□□ 0.74
SNX11-201ENST00000359238 CELF4Q9BZC1 486 aaKnown RBP19.64■□□□□ 0.74
SNX11-201ENST00000359238 CPSF2Q9P2I0 782 aaKnown RBP19.64■□□□□ 0.74
SNX11-201ENST00000359238 INTUQ9ULD6 942 aa19.64■□□□□ 0.74
SNX11-201ENST00000359238 MKI67P46013 3256 aaKnown RBP19.64■□□□□ 0.73
SNX11-201ENST00000359238 NRCAMQ92823 1304 aa19.64■□□□□ 0.73
SNX11-201ENST00000359238 CITO14578 2027 aa19.64■□□□□ 0.73
SNX11-201ENST00000359238 LACTBL1A8MY62 500 aa19.64■□□□□ 0.73
SNX11-201ENST00000359238 RGS16O15492 202 aaPredicted RBP19.64■□□□□ 0.73
SNX11-201ENST00000359238 CACNB2Q08289 660 aaPredicted RBP19.64■□□□□ 0.73
SNX11-201ENST00000359238 ZNF394Q53GI3 561 aa19.64■□□□□ 0.73
SNX11-201ENST00000359238 SCARA5Q6ZMJ2 495 aa19.64■□□□□ 0.73
SNX11-201ENST00000359238 PASD1Q8IV76 773 aa19.64■□□□□ 0.73
SNX11-201ENST00000359238 CD99L2Q8TCZ2 262 aa19.64■□□□□ 0.73
SNX11-201ENST00000359238 CPA5Q8WXQ8 436 aa19.64■□□□□ 0.73
SNX11-201ENST00000359238 TRIM7Q9C029 511 aa19.64■□□□□ 0.73
SNX11-201ENST00000359238 Q9Y3F1 56 aa19.64■□□□□ 0.73
SNX11-201ENST00000359238 USP15Q9Y4E8 981 aaPredicted RBP19.64■□□□□ 0.73
SNX11-201ENST00000359238 A0A0A6YYK5 440 aaPredicted RBP19.63■□□□□ 0.73
SNX11-201ENST00000359238 RRN3P2A6NIE6 340 aa19.63■□□□□ 0.73
SNX11-201ENST00000359238 ZC3H11AO75152 810 aaKnown RBP eCLIP19.63■□□□□ 0.73
SNX11-201ENST00000359238 DUSP11O75319 330 aaKnown RBP19.63■□□□□ 0.73
SNX11-201ENST00000359238 WFS1O76024 890 aa19.63■□□□□ 0.73
SNX11-201ENST00000359238 ASS1P00966 412 aaKnown RBP19.63■□□□□ 0.73
SNX11-201ENST00000359238 KRT16P08779 473 aa19.63■□□□□ 0.73
SNX11-201ENST00000359238 STAG3L1P0CL83 205 aa19.63■□□□□ 0.73
SNX11-201ENST00000359238 CD58P19256 250 aa19.63■□□□□ 0.73
SNX11-201ENST00000359238 MSH2P43246 934 aa19.63■□□□□ 0.73
SNX11-201ENST00000359238 PMS2P54278 862 aa19.63■□□□□ 0.73
SNX11-201ENST00000359238 PURAQ00577 322 aaKnown RBP19.63■□□□□ 0.73
SNX11-201ENST00000359238 SF3A3Q12874 501 aaKnown RBP eCLIP19.63■□□□□ 0.73
SNX11-201ENST00000359238 C6orf118Q5T5N4 469 aa19.63■□□□□ 0.73
SNX11-201ENST00000359238 DCAF12L1Q5VU92 463 aa19.63■□□□□ 0.73
SNX11-201ENST00000359238 DENND2CQ68D51 928 aa19.63■□□□□ 0.73
SNX11-201ENST00000359238 TMEM40Q8WWA1 233 aa19.63■□□□□ 0.73
SNX11-201ENST00000359238 ZSWIM1Q9BR11 485 aa19.63■□□□□ 0.73
SNX11-201ENST00000359238 XYLT2Q9H1B5 865 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms