RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 ZNF669Q96BR6 464 aaPredicted RBP19.12■□□□□ 0.65
SHANK1-202ENST00000359082 SGSM3Q96HU1 749 aa19.12■□□□□ 0.65
SHANK1-202ENST00000359082 BBS2Q9BXC9 721 aa19.12■□□□□ 0.65
SHANK1-202ENST00000359082 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.12■□□□□ 0.65
SHANK1-202ENST00000359082 IQGAP3Q86VI3 1631 aa19.12■□□□□ 0.65
SHANK1-202ENST00000359082 ZNF157P51786 506 aaPredicted RBP19.12■□□□□ 0.65
SHANK1-202ENST00000359082 CCZ1BP86790 482 aa19.12■□□□□ 0.65
SHANK1-202ENST00000359082 CCZ1P86791 482 aaPredicted RBP19.12■□□□□ 0.65
SHANK1-202ENST00000359082 TKFCQ3LXA3 575 aa19.12■□□□□ 0.65
SHANK1-202ENST00000359082 AASDHQ4L235 1098 aaPredicted RBP19.12■□□□□ 0.65
SHANK1-202ENST00000359082 PPIL6Q8IXY8 311 aa19.12■□□□□ 0.65
SHANK1-202ENST00000359082 SATB2Q9UPW6 733 aa19.12■□□□□ 0.65
SHANK1-202ENST00000359082 RHOBTB3O94955 611 aa19.12■□□□□ 0.65
SHANK1-202ENST00000359082 NDUFB10O96000 172 aa19.12■□□□□ 0.65
SHANK1-202ENST00000359082 CHI3L1P36222 383 aaPredicted RBP19.12■□□□□ 0.65
SHANK1-202ENST00000359082 GEMIN4P57678 1058 aaKnown RBP19.12■□□□□ 0.65
SHANK1-202ENST00000359082 P3H2Q8IVL5 708 aa19.12■□□□□ 0.65
SHANK1-202ENST00000359082 TBC1D16Q8TBP0 767 aa19.12■□□□□ 0.65
SHANK1-202ENST00000359082 JADE3Q92613 823 aa19.12■□□□□ 0.65
SHANK1-202ENST00000359082 PRR23AA6NEV1 266 aa19.12■□□□□ 0.65
SHANK1-202ENST00000359082 GYS1P13807 737 aa19.12■□□□□ 0.65
SHANK1-202ENST00000359082 NR1I3Q14994 352 aa19.12■□□□□ 0.65
SHANK1-202ENST00000359082 CCDC33Q8N5R6 958 aa19.12■□□□□ 0.65
SHANK1-202ENST00000359082 ZIM3Q96PE6 472 aa19.12■□□□□ 0.65
SHANK1-202ENST00000359082 CNOT7Q9UIV1 285 aaKnown RBP19.12■□□□□ 0.65
SHANK1-202ENST00000359082 EVPLLA8MZ36 301 aa19.12■□□□□ 0.65
SHANK1-202ENST00000359082 PTGER2P43116 358 aa19.12■□□□□ 0.65
SHANK1-202ENST00000359082 KCNJ1P48048 391 aa19.12■□□□□ 0.65
SHANK1-202ENST00000359082 NUDT2P50583 147 aa19.12■□□□□ 0.65
SHANK1-202ENST00000359082 FXR1P51114 621 aaKnown RBP eCLIP19.12■□□□□ 0.65
SHANK1-202ENST00000359082 KLC1Q07866 573 aa19.12■□□□□ 0.65
SHANK1-202ENST00000359082 ORC1Q13415 861 aa19.12■□□□□ 0.65
SHANK1-202ENST00000359082 NFIXQ14938 502 aa19.12■□□□□ 0.65
SHANK1-202ENST00000359082 PRAMEF18Q5VWM3 479 aa19.12■□□□□ 0.65
SHANK1-202ENST00000359082 ARHGAP17Q68EM7 881 aa19.12■□□□□ 0.65
SHANK1-202ENST00000359082 KCTD17Q8N5Z5 321 aa19.12■□□□□ 0.65
SHANK1-202ENST00000359082 DNAJC9Q8WXX5 260 aa19.12■□□□□ 0.65
SHANK1-202ENST00000359082 NSL1Q96IY1 281 aa19.12■□□□□ 0.65
SHANK1-202ENST00000359082 CCSER1Q9C0I3 900 aa19.12■□□□□ 0.65
SHANK1-202ENST00000359082 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.12■□□□□ 0.65
SHANK1-202ENST00000359082 AXIN2Q9Y2T1 843 aa19.12■□□□□ 0.65
SHANK1-202ENST00000359082 ARHGEF40Q8TER5 1519 aa19.12■□□□□ 0.65
SHANK1-202ENST00000359082 CENPCQ03188 943 aa19.11■□□□□ 0.65
SHANK1-202ENST00000359082 TRIM48Q8IWZ4 208 aa19.11■□□□□ 0.65
SHANK1-202ENST00000359082 TEX13BQ9BXU2 312 aa19.11■□□□□ 0.65
SHANK1-202ENST00000359082 A0A0G2JLW4 131 aa19.11■□□□□ 0.65
SHANK1-202ENST00000359082 VWA5AO00534 786 aa19.11■□□□□ 0.65
SHANK1-202ENST00000359082 ITGB3P05106 788 aa19.11■□□□□ 0.65
SHANK1-202ENST00000359082 IRX1P78414 480 aaPredicted RBP19.11■□□□□ 0.65
SHANK1-202ENST00000359082 GALNTL6Q49A17 601 aa19.11■□□□□ 0.65
SHANK1-202ENST00000359082 WLSQ5T9L3 541 aa19.11■□□□□ 0.65
SHANK1-202ENST00000359082 FEZF2Q8TBJ5 459 aa19.11■□□□□ 0.65
SHANK1-202ENST00000359082 ECSITQ9BQ95 431 aa19.11■□□□□ 0.65
SHANK1-202ENST00000359082 RNF112Q9ULX5 631 aa19.11■□□□□ 0.65
SHANK1-202ENST00000359082 A2ML1A8K2U0 1454 aa19.11■□□□□ 0.65
SHANK1-202ENST00000359082 USP1O94782 785 aa19.11■□□□□ 0.65
SHANK1-202ENST00000359082 EN1Q05925 392 aaPredicted RBP19.11■□□□□ 0.65
SHANK1-202ENST00000359082 CDC16Q13042 620 aa19.11■□□□□ 0.65
SHANK1-202ENST00000359082 SNAPC2Q13487 334 aa19.11■□□□□ 0.65
SHANK1-202ENST00000359082 OTOAQ7RTW8 1153 aa19.11■□□□□ 0.65
SHANK1-202ENST00000359082 ABI2Q9NYB9 513 aaPredicted RBP19.11■□□□□ 0.65
SHANK1-202ENST00000359082 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.11■□□□□ 0.65
SHANK1-202ENST00000359082 H0YC42 278 aa19.11■□□□□ 0.65
SHANK1-202ENST00000359082 NFIBO00712 420 aa19.11■□□□□ 0.65
SHANK1-202ENST00000359082 PBLDP30039 288 aaPredicted RBP19.11■□□□□ 0.65
SHANK1-202ENST00000359082 MLH1P40692 756 aa19.11■□□□□ 0.65
SHANK1-202ENST00000359082 EXOSC10Q01780 885 aaKnown RBP19.11■□□□□ 0.65
SHANK1-202ENST00000359082 FAXCQ5TGI0 409 aa19.11■□□□□ 0.65
SHANK1-202ENST00000359082 TDRD10Q5VZ19 366 aaKnown RBP19.11■□□□□ 0.65
SHANK1-202ENST00000359082 RBBP8Q99708 897 aa19.11■□□□□ 0.65
SHANK1-202ENST00000359082 IGF2BP3O00425 579 aaKnown RBP eCLIP19.11■□□□□ 0.65
SHANK1-202ENST00000359082 KCNQ2O43526 872 aa19.11■□□□□ 0.65
SHANK1-202ENST00000359082 SERPINB5P36952 375 aa19.11■□□□□ 0.65
SHANK1-202ENST00000359082 NME5P56597 212 aa19.11■□□□□ 0.65
SHANK1-202ENST00000359082 OLFML3Q9NRN5 406 aa19.11■□□□□ 0.65
SHANK1-202ENST00000359082 CDY2AQ9Y6F7 541 aa19.11■□□□□ 0.65
SHANK1-202ENST00000359082 CDY1Q9Y6F8 540 aa19.11■□□□□ 0.65
SHANK1-202ENST00000359082 ENO4A6NNW6 628 aa19.1■□□□□ 0.65
SHANK1-202ENST00000359082 H2AFYO75367 372 aaKnown RBP19.1■□□□□ 0.65
SHANK1-202ENST00000359082 ALOX15P16050 662 aaPredicted RBP19.1■□□□□ 0.65
SHANK1-202ENST00000359082 TARSP26639 723 aaKnown RBP19.1■□□□□ 0.65
SHANK1-202ENST00000359082 DEFA1P59665 94 aa19.1■□□□□ 0.65
SHANK1-202ENST00000359082 DEFA3P59666 94 aa19.1■□□□□ 0.65
SHANK1-202ENST00000359082 EFHC1Q5JVL4 640 aa19.1■□□□□ 0.65
SHANK1-202ENST00000359082 BARGINQ6ZT62 677 aa19.1■□□□□ 0.65
SHANK1-202ENST00000359082 PPP2R3CQ969Q6 453 aa19.1■□□□□ 0.65
SHANK1-202ENST00000359082 HPDLQ96IR7 371 aa19.1■□□□□ 0.65
SHANK1-202ENST00000359082 PRR12Q9ULL5 1215 aa19.1■□□□□ 0.65
SHANK1-202ENST00000359082 ZDHHC9Q9Y397 364 aa19.1■□□□□ 0.65
SHANK1-202ENST00000359082 STK4Q13043 487 aa19.1■□□□□ 0.65
SHANK1-202ENST00000359082 MTFR1Q15390 333 aa19.1■□□□□ 0.65
SHANK1-202ENST00000359082 E4F1Q66K89 784 aaPredicted RBP19.1■□□□□ 0.65
SHANK1-202ENST00000359082 KCTD10Q9H3F6 313 aa19.1■□□□□ 0.65
SHANK1-202ENST00000359082 KLK14Q9P0G3 267 aa19.1■□□□□ 0.65
SHANK1-202ENST00000359082 SSU72P8A0A1W2PR75 194 aa19.1■□□□□ 0.65
SHANK1-202ENST00000359082 CFAP99D6REC4 459 aa19.1■□□□□ 0.65
SHANK1-202ENST00000359082 F8W810 466 aa19.1■□□□□ 0.65
SHANK1-202ENST00000359082 COILP38432 576 aaPredicted RBP19.1■□□□□ 0.65
SHANK1-202ENST00000359082 CDC42EP5Q6NZY7 148 aa19.1■□□□□ 0.65
SHANK1-202ENST00000359082 MPP6Q9NZW5 540 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms