RNA–Protein interactions for RNA: ENST00000357783.6

PHTF1-201, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 1 (best) BASIC

Gene PHTF1, Length 2,747 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-201ENST00000357783 BCO2Q9BYV7 579 aa16.71■□□□□ 0.27
PHTF1-201ENST00000357783 SYNCQ9H7C4 482 aa16.71■□□□□ 0.27
PHTF1-201ENST00000357783 MED7O43513 233 aa16.7■□□□□ 0.26
PHTF1-201ENST00000357783 ITGBL1O95965 494 aaPredicted RBP16.7■□□□□ 0.26
PHTF1-201ENST00000357783 POLR2BP30876 1174 aaKnown RBP16.7■□□□□ 0.26
PHTF1-201ENST00000357783 CDKN2BP42772 138 aa16.7■□□□□ 0.26
PHTF1-201ENST00000357783 ARSEP51690 589 aa16.7■□□□□ 0.26
PHTF1-201ENST00000357783 CYP4F22Q6NT55 531 aa16.7■□□□□ 0.26
PHTF1-201ENST00000357783 YTHDF3Q7Z739 585 aaKnown RBP16.7■□□□□ 0.26
PHTF1-201ENST00000357783 NIPA2Q8N8Q9 360 aa16.7■□□□□ 0.26
PHTF1-201ENST00000357783 CPXM1Q96SM3 734 aa16.7■□□□□ 0.26
PHTF1-201ENST00000357783 DDX56Q9NY93 547 aaKnown RBP16.7■□□□□ 0.26
PHTF1-201ENST00000357783 COPS2P61201 443 aa16.7■□□□□ 0.26
PHTF1-201ENST00000357783 DYNLT1P63172 113 aa16.7■□□□□ 0.26
PHTF1-201ENST00000357783 GPS1Q13098 491 aa16.7■□□□□ 0.26
PHTF1-201ENST00000357783 CNGA2Q16280 664 aa16.7■□□□□ 0.26
PHTF1-201ENST00000357783 ALLCQ8N6M5 410 aa16.7■□□□□ 0.26
PHTF1-201ENST00000357783 EMC1Q8N766 993 aa16.7■□□□□ 0.26
PHTF1-201ENST00000357783 RBM15Q96T37 977 aaKnown RBP eCLIP16.7■□□□□ 0.26
PHTF1-201ENST00000357783 PDZD7Q9H5P4 517 aa16.7■□□□□ 0.26
PHTF1-201ENST00000357783 PLCB3Q01970 1234 aa16.69■□□□□ 0.26
PHTF1-201ENST00000357783 LRRC14Q15048 493 aa16.69■□□□□ 0.26
PHTF1-201ENST00000357783 AMHR2Q16671 573 aa16.69■□□□□ 0.26
PHTF1-201ENST00000357783 KCNT1Q5JUK3 1230 aa16.69■□□□□ 0.26
PHTF1-201ENST00000357783 ZNF484Q5JVG2 852 aa16.69■□□□□ 0.26
PHTF1-201ENST00000357783 DPH6Q7L8W6 267 aa16.69■□□□□ 0.26
PHTF1-201ENST00000357783 ARMC9Q7Z3E5 817 aa16.69■□□□□ 0.26
PHTF1-201ENST00000357783 ZCCHC9Q8N567 271 aaKnown RBP16.69■□□□□ 0.26
PHTF1-201ENST00000357783 SLC4A11Q8NBS3 891 aa16.69■□□□□ 0.26
PHTF1-201ENST00000357783 ELOVL4Q9GZR5 314 aa16.69■□□□□ 0.26
PHTF1-201ENST00000357783 LHX5Q9H2C1 402 aa16.69■□□□□ 0.26
PHTF1-201ENST00000357783 METTL5Q9NRN9 209 aaKnown RBP16.69■□□□□ 0.26
PHTF1-201ENST00000357783 TBK1Q9UHD2 729 aa16.69■□□□□ 0.26
PHTF1-201ENST00000357783 CAPN7Q9Y6W3 813 aa16.69■□□□□ 0.26
PHTF1-201ENST00000357783 PLXNA1Q9UIW2 1896 aa16.69■□□□□ 0.26
PHTF1-201ENST00000357783 SIGLEC16A6NMB1 481 aa16.69■□□□□ 0.26
PHTF1-201ENST00000357783 CPP00450 1065 aa16.69■□□□□ 0.26
PHTF1-201ENST00000357783 ERBB2P04626 1255 aa16.69■□□□□ 0.26
PHTF1-201ENST00000357783 VCPP55072 806 aaKnown RBP16.69■□□□□ 0.26
PHTF1-201ENST00000357783 C9orf131Q5VYM1 1079 aa16.69■□□□□ 0.26
PHTF1-201ENST00000357783 LRRC34Q8IZ02 419 aa16.69■□□□□ 0.26
PHTF1-201ENST00000357783 AFG1LQ8WV93 481 aa16.69■□□□□ 0.26
PHTF1-201ENST00000357783 TMEM121Q9BTD3 319 aa16.69■□□□□ 0.26
PHTF1-201ENST00000357783 NFKBIZQ9BYH8 718 aa16.69■□□□□ 0.26
PHTF1-201ENST00000357783 SAYSD1Q9NPB0 183 aa16.69■□□□□ 0.26
PHTF1-201ENST00000357783 SAE1Q9UBE0 346 aaPredicted RBP16.69■□□□□ 0.26
PHTF1-201ENST00000357783 ZSWIM8A7E2V4 1837 aa16.69■□□□□ 0.26
PHTF1-201ENST00000357783 PCNTO95613 3336 aa16.69■□□□□ 0.26
PHTF1-201ENST00000357783 DNALI1O14645 258 aaPredicted RBP16.69■□□□□ 0.26
PHTF1-201ENST00000357783 LRCH4O75427 683 aa16.69■□□□□ 0.26
PHTF1-201ENST00000357783 MCF2P10911 925 aa16.69■□□□□ 0.26
PHTF1-201ENST00000357783 CETPP11597 493 aa16.69■□□□□ 0.26
PHTF1-201ENST00000357783 IL1R2P27930 398 aa16.69■□□□□ 0.26
PHTF1-201ENST00000357783 MAGEA4P43358 317 aa16.69■□□□□ 0.26
PHTF1-201ENST00000357783 PTPN11Q06124 597 aaPredicted RBP16.69■□□□□ 0.26
PHTF1-201ENST00000357783 LAMC2Q13753 1193 aa16.69■□□□□ 0.26
PHTF1-201ENST00000357783 HP1BP3Q5SSJ5 553 aaPredicted RBP16.69■□□□□ 0.26
PHTF1-201ENST00000357783 DRICH1Q6PGQ1 229 aaPredicted RBP16.69■□□□□ 0.26
PHTF1-201ENST00000357783 CCDC121Q6ZUS5 278 aa16.69■□□□□ 0.26
PHTF1-201ENST00000357783 ARFGAP1Q8N6T3 406 aa16.69■□□□□ 0.26
PHTF1-201ENST00000357783 TMEM120BA0PK00 339 aa16.68■□□□□ 0.26
PHTF1-201ENST00000357783 SGK1O00141 431 aa16.68■□□□□ 0.26
PHTF1-201ENST00000357783 IFNB1P01574 187 aa16.68■□□□□ 0.26
PHTF1-201ENST00000357783 VIMP08670 466 aaKnown RBP16.68■□□□□ 0.26
PHTF1-201ENST00000357783 ARF4P18085 180 aaPredicted RBP16.68■□□□□ 0.26
PHTF1-201ENST00000357783 ATP5DP30049 168 aa16.68■□□□□ 0.26
PHTF1-201ENST00000357783 PTPN7P35236 360 aa16.68■□□□□ 0.26
PHTF1-201ENST00000357783 SLC25A11Q02978 314 aaKnown RBP16.68■□□□□ 0.26
PHTF1-201ENST00000357783 TAPT1Q6NXT6 567 aa16.68■□□□□ 0.26
PHTF1-201ENST00000357783 XYLT1Q86Y38 959 aa16.68■□□□□ 0.26
PHTF1-201ENST00000357783 KIAA0319LQ8IZA0 1049 aa16.68■□□□□ 0.26
PHTF1-201ENST00000357783 CYP4X1Q8N118 509 aa16.68■□□□□ 0.26
PHTF1-201ENST00000357783 CCHCR1Q8TD31 782 aa16.68■□□□□ 0.26
PHTF1-201ENST00000357783 KAT2BQ92831 832 aa16.68■□□□□ 0.26
PHTF1-201ENST00000357783 MLXIPLQ9NP71 852 aa16.68■□□□□ 0.26
PHTF1-201ENST00000357783 KCNK9Q9NPC2 374 aa16.68■□□□□ 0.26
PHTF1-201ENST00000357783 C3orf70A6NLC5 250 aaPredicted RBP16.68■□□□□ 0.26
PHTF1-201ENST00000357783 M0QYV0 167 aa16.68■□□□□ 0.26
PHTF1-201ENST00000357783 CILPO75339 1184 aa16.68■□□□□ 0.26
PHTF1-201ENST00000357783 MICAL2O94851 1124 aa16.68■□□□□ 0.26
PHTF1-201ENST00000357783 TNFAIP2Q03169 654 aa16.68■□□□□ 0.26
PHTF1-201ENST00000357783 SNAPC2Q13487 334 aa16.68■□□□□ 0.26
PHTF1-201ENST00000357783 OASLQ15646 514 aaKnown RBP16.68■□□□□ 0.26
PHTF1-201ENST00000357783 FAM187BQ17R55 369 aa16.68■□□□□ 0.26
PHTF1-201ENST00000357783 SLC10A6Q3KNW5 377 aa16.68■□□□□ 0.26
PHTF1-201ENST00000357783 TAX1BP1Q86VP1 789 aa16.68■□□□□ 0.26
PHTF1-201ENST00000357783 ANKRD42Q8N9B4 389 aa16.68■□□□□ 0.26
PHTF1-201ENST00000357783 SHCBP1Q8NEM2 672 aa16.68■□□□□ 0.26
PHTF1-201ENST00000357783 CXorf38Q8TB03 319 aa16.68■□□□□ 0.26
PHTF1-201ENST00000357783 DYDC1Q8WWB3 177 aa16.68■□□□□ 0.26
PHTF1-201ENST00000357783 C10orf88Q9H8K7 445 aa16.68■□□□□ 0.26
PHTF1-201ENST00000357783 GH1P01241 217 aa16.67■□□□□ 0.26
PHTF1-201ENST00000357783 PECAM1P16284 738 aaPredicted RBP16.67■□□□□ 0.26
PHTF1-201ENST00000357783 ADORA2AP29274 412 aa16.67■□□□□ 0.26
PHTF1-201ENST00000357783 ADCYAP1R1P41586 468 aa16.67■□□□□ 0.26
PHTF1-201ENST00000357783 VSTM1Q6UX27 236 aa16.67■□□□□ 0.26
PHTF1-201ENST00000357783 POLNQ7Z5Q5 900 aa16.67■□□□□ 0.26
PHTF1-201ENST00000357783 NLRP7Q8WX94 980 aa16.67■□□□□ 0.26
PHTF1-201ENST00000357783 TMEM176AQ96HP8 235 aa16.67■□□□□ 0.26
PHTF1-201ENST00000357783 HPDLQ96IR7 371 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms