RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 KCNK13Q9HB14 408 aa10.65□□□□□ -0.7
PTPRA-203ENST00000356147 AVENQ9NQS1 362 aaPredicted RBP10.65□□□□□ -0.7
PTPRA-203ENST00000356147 KRT82Q9NSB4 513 aa10.65□□□□□ -0.7
PTPRA-203ENST00000356147 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.65□□□□□ -0.74e-6■■■■□ 23.7
PTPRA-203ENST00000356147 TJP2Q9UDY2 1190 aa10.65□□□□□ -0.7
PTPRA-203ENST00000356147 SCOCQ9UIL1 159 aa10.65□□□□□ -0.7
PTPRA-203ENST00000356147 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.65□□□□□ -0.7
PTPRA-203ENST00000356147 MEI4A8MW99 385 aa10.65□□□□□ -0.7
PTPRA-203ENST00000356147 B2RBV5 119 aa10.65□□□□□ -0.7
PTPRA-203ENST00000356147 POLRMTO00411 1230 aaKnown RBP10.65□□□□□ -0.7
PTPRA-203ENST00000356147 FCHO1O14526 889 aa10.65□□□□□ -0.7
PTPRA-203ENST00000356147 PSTPIP1O43586 416 aa10.65□□□□□ -0.7
PTPRA-203ENST00000356147 TMEM63AO94886 807 aa10.65□□□□□ -0.7
PTPRA-203ENST00000356147 CD48P09326 243 aa10.65□□□□□ -0.7
PTPRA-203ENST00000356147 PYGBP11216 843 aa10.65□□□□□ -0.7
PTPRA-203ENST00000356147 CDHR3Q6ZTQ4 885 aa10.65□□□□□ -0.7
PTPRA-203ENST00000356147 EGFL6Q8IUX8 553 aa10.65□□□□□ -0.7
PTPRA-203ENST00000356147 ACTL9Q8TC94 416 aa10.65□□□□□ -0.7
PTPRA-203ENST00000356147 PTCD3Q96EY7 689 aaKnown RBP10.65□□□□□ -0.7
PTPRA-203ENST00000356147 TAAR1Q96RJ0 339 aa10.65□□□□□ -0.7
PTPRA-203ENST00000356147 RIT2Q99578 217 aa10.65□□□□□ -0.7
PTPRA-203ENST00000356147 TRIM56Q9BRZ2 755 aaKnown RBP10.65□□□□□ -0.7
PTPRA-203ENST00000356147 SHCBP1LQ9BZQ2 653 aa10.65□□□□□ -0.7
PTPRA-203ENST00000356147 TRIM4Q9C037 500 aa10.65□□□□□ -0.7
PTPRA-203ENST00000356147 AGO4Q9HCK5 861 aaKnown RBP10.65□□□□□ -0.7
PTPRA-203ENST00000356147 AGTPBP1Q9UPW5 1226 aa10.65□□□□□ -0.7
PTPRA-203ENST00000356147 STRCQ7RTU9 1775 aa10.65□□□□□ -0.7
PTPRA-203ENST00000356147 CYB561D2O14569 222 aa10.64□□□□□ -0.71
PTPRA-203ENST00000356147 ATP2A1O14983 1001 aa10.64□□□□□ -0.71
PTPRA-203ENST00000356147 RGL2O15211 777 aa10.64□□□□□ -0.71
PTPRA-203ENST00000356147 TJP3O95049 919 aa10.64□□□□□ -0.71
PTPRA-203ENST00000356147 TOP3BO95985 862 aaKnown RBP10.64□□□□□ -0.71
PTPRA-203ENST00000356147 CYP1A1P04798 512 aaPredicted RBP10.64□□□□□ -0.71
PTPRA-203ENST00000356147 SKIP12755 728 aa10.64□□□□□ -0.71
PTPRA-203ENST00000356147 NCKAP1LP55160 1127 aa10.64□□□□□ -0.71
PTPRA-203ENST00000356147 OTUD4Q01804 1114 aaKnown RBP10.64□□□□□ -0.71
PTPRA-203ENST00000356147 SLC34A1Q06495 639 aa10.64□□□□□ -0.71
PTPRA-203ENST00000356147 FAAP100Q0VG06 881 aa10.64□□□□□ -0.71
PTPRA-203ENST00000356147 TREML1Q86YW5 311 aa10.64□□□□□ -0.71
PTPRA-203ENST00000356147 MAP4K3Q8IVH8 894 aa10.64□□□□□ -0.71
PTPRA-203ENST00000356147 GPD1LQ8N335 351 aa10.64□□□□□ -0.71
PTPRA-203ENST00000356147 TMEM130Q8N3G9 435 aa10.64□□□□□ -0.71
PTPRA-203ENST00000356147 RAVER2Q9HCJ3 691 aaKnown RBP10.64□□□□□ -0.71
PTPRA-203ENST00000356147 PPARGC1AQ9UBK2 798 aaKnown RBP10.64□□□□□ -0.71
PTPRA-203ENST00000356147 PCSK1NQ9UHG2 260 aa10.64□□□□□ -0.71
PTPRA-203ENST00000356147 LRCH1Q9Y2L9 728 aa10.64□□□□□ -0.71
PTPRA-203ENST00000356147 MT-ND3P03897 115 aa10.64□□□□□ -0.71
PTPRA-203ENST00000356147 BRD2P25440 801 aaKnown RBP10.64□□□□□ -0.71
PTPRA-203ENST00000356147 ORC1Q13415 861 aa10.64□□□□□ -0.71
PTPRA-203ENST00000356147 FAXCQ5TGI0 409 aa10.64□□□□□ -0.71
PTPRA-203ENST00000356147 CCDC62Q6P9F0 684 aa10.64□□□□□ -0.71
PTPRA-203ENST00000356147 SCARA5Q6ZMJ2 495 aa10.64□□□□□ -0.71
PTPRA-203ENST00000356147 RGS9BPQ6ZS82 235 aa10.64□□□□□ -0.71
PTPRA-203ENST00000356147 CTAGE3PQ8IX95 158 aa10.64□□□□□ -0.71
PTPRA-203ENST00000356147 OGFOD1Q8N543 542 aa10.64□□□□□ -0.71
PTPRA-203ENST00000356147 FAM71DQ8N9W8 422 aa10.64□□□□□ -0.71
PTPRA-203ENST00000356147 HIPK4Q8NE63 616 aa10.64□□□□□ -0.71
PTPRA-203ENST00000356147 CFAP61Q8NHU2 1237 aa10.64□□□□□ -0.71
PTPRA-203ENST00000356147 CPT1BQ92523 772 aa10.64□□□□□ -0.71
PTPRA-203ENST00000356147 TTC25Q96NG3 672 aa10.64□□□□□ -0.71
PTPRA-203ENST00000356147 THTPAQ9BU02 230 aa10.64□□□□□ -0.71
PTPRA-203ENST00000356147 IDI2Q9BXS1 227 aa10.64□□□□□ -0.71
PTPRA-203ENST00000356147 SLC13A1Q9BZW2 595 aa10.64□□□□□ -0.71
PTPRA-203ENST00000356147 VCXQ9H320 206 aa10.64□□□□□ -0.71
PTPRA-203ENST00000356147 ETAA1Q9NY74 926 aa10.64□□□□□ -0.71
PTPRA-203ENST00000356147 NUB1Q9Y5A7 615 aa10.64□□□□□ -0.71
PTPRA-203ENST00000356147 ZNF541Q9H0D2 1346 aa10.64□□□□□ -0.71
PTPRA-203ENST00000356147 GREB1LQ9C091 1923 aaPredicted RBP10.64□□□□□ -0.71
PTPRA-203ENST00000356147 SIPA1L1O43166 1804 aa10.64□□□□□ -0.71
PTPRA-203ENST00000356147 TRAFD1O14545 582 aaPredicted RBP10.64□□□□□ -0.71
PTPRA-203ENST00000356147 VNN1O95497 513 aa10.64□□□□□ -0.71
PTPRA-203ENST00000356147 NPTXRO95502 500 aa10.64□□□□□ -0.71
PTPRA-203ENST00000356147 HIRAP54198 1017 aaPredicted RBP10.64□□□□□ -0.71
PTPRA-203ENST00000356147 VCPP55072 806 aaKnown RBP10.64□□□□□ -0.71
PTPRA-203ENST00000356147 RASA2Q15283 850 aa10.64□□□□□ -0.71
PTPRA-203ENST00000356147 TAF5Q15542 800 aa10.64□□□□□ -0.71
PTPRA-203ENST00000356147 SGSM1Q2NKQ1 1148 aa10.64□□□□□ -0.71
PTPRA-203ENST00000356147 EFHC2Q5JST6 749 aa10.64□□□□□ -0.71
PTPRA-203ENST00000356147 TDRPQ86YL5 185 aa10.64□□□□□ -0.71
PTPRA-203ENST00000356147 RELL1Q8IUW5 271 aa10.64□□□□□ -0.71
PTPRA-203ENST00000356147 UNC45BQ8IWX7 931 aa10.64□□□□□ -0.71
PTPRA-203ENST00000356147 ABRAQ8N0Z2 381 aa10.64□□□□□ -0.71
PTPRA-203ENST00000356147 EMC1Q8N766 993 aa10.64□□□□□ -0.71
PTPRA-203ENST00000356147 EFCAB3Q8N7B9 438 aa10.64□□□□□ -0.71
PTPRA-203ENST00000356147 OR5B17Q8NGF7 314 aa10.64□□□□□ -0.71
PTPRA-203ENST00000356147 SH3TC2Q8TF17 1288 aa10.64□□□□□ -0.71
PTPRA-203ENST00000356147 USP6NLQ92738 828 aa10.64□□□□□ -0.71
PTPRA-203ENST00000356147 FGD4Q96M96 766 aa10.64□□□□□ -0.71
PTPRA-203ENST00000356147 MFSD14AQ96MC6 490 aa10.64□□□□□ -0.71
PTPRA-203ENST00000356147 ACAP3Q96P50 834 aa10.64□□□□□ -0.71
PTPRA-203ENST00000356147 SENP7Q9BQF6 1050 aa10.64□□□□□ -0.71
PTPRA-203ENST00000356147 EHMT1Q9H9B1 1298 aa10.64□□□□□ -0.71
PTPRA-203ENST00000356147 EXOC7Q9UPT5 735 aa10.64□□□□□ -0.71
PTPRA-203ENST00000356147 ASB3Q9Y575 518 aa10.64□□□□□ -0.71
PTPRA-203ENST00000356147 E7ENQ6 273 aa10.63□□□□□ -0.71
PTPRA-203ENST00000356147 ECE2O60344 883 aa10.63□□□□□ -0.71
PTPRA-203ENST00000356147 CST8O60676 142 aa10.63□□□□□ -0.71
PTPRA-203ENST00000356147 SORBS2O94875 1100 aaKnown RBP10.63□□□□□ -0.71
PTPRA-203ENST00000356147 ZWINTO95229 277 aa10.63□□□□□ -0.71
PTPRA-203ENST00000356147 POTEJP0CG39 1038 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms