RNA–Protein interactions for RNA: ENST00000355633.5

HOXA1-202, Transcript of homeobox A1, humanhuman

TSL 1 (best) BASIC

Gene HOXA1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-202ENST00000355633 SLFN11Q7Z7L1 901 aa14.44□□□□□ -0.1
HOXA1-202ENST00000355633 HASPINQ8TF76 798 aa14.44□□□□□ -0.1
HOXA1-202ENST00000355633 GOLPH3Q9H4A6 298 aa14.44□□□□□ -0.1
HOXA1-202ENST00000355633 CDC23Q9UJX2 597 aa14.44□□□□□ -0.1
HOXA1-202ENST00000355633 NCK2O43639 380 aa14.44□□□□□ -0.1
HOXA1-202ENST00000355633 B4GALT3O60512 393 aa14.44□□□□□ -0.1
HOXA1-202ENST00000355633 TIMP1P01033 207 aa14.44□□□□□ -0.1
HOXA1-202ENST00000355633 BRCC3P46736 316 aa14.44□□□□□ -0.1
HOXA1-202ENST00000355633 LHX1P48742 406 aa14.44□□□□□ -0.1
HOXA1-202ENST00000355633 ARHGAP17Q68EM7 881 aa14.44□□□□□ -0.1
HOXA1-202ENST00000355633 CD300LGQ6UXG3 332 aa14.44□□□□□ -0.1
HOXA1-202ENST00000355633 PHLDB2Q86SQ0 1253 aa14.44□□□□□ -0.1
HOXA1-202ENST00000355633 NPAS4Q8IUM7 802 aa14.44□□□□□ -0.1
HOXA1-202ENST00000355633 COLGALT2Q8IYK4 626 aa14.44□□□□□ -0.1
HOXA1-202ENST00000355633 UBA3Q8TBC4 463 aa14.44□□□□□ -0.1
HOXA1-202ENST00000355633 CASD1Q96PB1 797 aa14.44□□□□□ -0.1
HOXA1-202ENST00000355633 TLR10Q9BXR5 811 aa14.44□□□□□ -0.1
HOXA1-202ENST00000355633 MRPL47Q9HD33 250 aaKnown RBP14.44□□□□□ -0.1
HOXA1-202ENST00000355633 PRDM10Q9NQV6 1147 aa14.44□□□□□ -0.1
HOXA1-202ENST00000355633 DDX43Q9NXZ2 648 aaKnown RBP14.44□□□□□ -0.1
HOXA1-202ENST00000355633 SNX12Q9UMY4 172 aa14.44□□□□□ -0.1
HOXA1-202ENST00000355633 TIMM13Q9Y5L4 95 aaPredicted RBP14.44□□□□□ -0.1
HOXA1-202ENST00000355633 SCINQ9Y6U3 715 aa14.44□□□□□ -0.1
HOXA1-202ENST00000355633 TRIM43BA6NCK2 446 aa14.43□□□□□ -0.1
HOXA1-202ENST00000355633 KIF4AO95239 1232 aa14.43□□□□□ -0.1
HOXA1-202ENST00000355633 GPD2P43304 727 aa14.43□□□□□ -0.1
HOXA1-202ENST00000355633 OR1G1P47890 313 aa14.43□□□□□ -0.1
HOXA1-202ENST00000355633 PTPN20Q4JDL3 420 aa14.43□□□□□ -0.1
HOXA1-202ENST00000355633 LLGL2Q6P1M3 1020 aa14.43□□□□□ -0.1
HOXA1-202ENST00000355633 PEX26Q7Z412 305 aa14.43□□□□□ -0.1
HOXA1-202ENST00000355633 CRIPAKQ8N1N5 446 aa14.43□□□□□ -0.1
HOXA1-202ENST00000355633 B3GALNT2Q8NCR0 500 aa14.43□□□□□ -0.1
HOXA1-202ENST00000355633 MSANTD4Q8NCY6 345 aa14.43□□□□□ -0.1
HOXA1-202ENST00000355633 TRIM43Q96BQ3 446 aaPredicted RBP14.43□□□□□ -0.1
HOXA1-202ENST00000355633 HESX1Q9UBX0 185 aa14.43□□□□□ -0.1
HOXA1-202ENST00000355633 CYTH4Q9UIA0 394 aa14.43□□□□□ -0.1
HOXA1-202ENST00000355633 HYOU1Q9Y4L1 999 aa14.43□□□□□ -0.1
HOXA1-202ENST00000355633 ARHGEF37A1IGU5 675 aa14.42□□□□□ -0.1
HOXA1-202ENST00000355633 I3L4J1 428 aa14.42□□□□□ -0.1
HOXA1-202ENST00000355633 M0QZQ0 153 aa14.42□□□□□ -0.1
HOXA1-202ENST00000355633 KIAA0355O15063 1070 aa14.42□□□□□ -0.1
HOXA1-202ENST00000355633 ITGB1P05556 798 aa14.42□□□□□ -0.1
HOXA1-202ENST00000355633 RAG1P15918 1043 aa14.42□□□□□ -0.1
HOXA1-202ENST00000355633 PRLRP16471 622 aa14.42□□□□□ -0.1
HOXA1-202ENST00000355633 ACAT1P24752 427 aaKnown RBP14.42□□□□□ -0.1
HOXA1-202ENST00000355633 GATMP50440 423 aa14.42□□□□□ -0.1
HOXA1-202ENST00000355633 MESDQ14696 234 aa14.42□□□□□ -0.1
HOXA1-202ENST00000355633 PLEKHA7Q6IQ23 1121 aa14.42□□□□□ -0.1
HOXA1-202ENST00000355633 C11orf63Q6NUN7 778 aa14.42□□□□□ -0.1
HOXA1-202ENST00000355633 METTL23Q86XA0 190 aa14.42□□□□□ -0.1
HOXA1-202ENST00000355633 SPATA18Q8TC71 538 aa14.42□□□□□ -0.1
HOXA1-202ENST00000355633 RSPH1Q8WYR4 309 aa14.42□□□□□ -0.1
HOXA1-202ENST00000355633 LPIN3Q9BQK8 851 aa14.42□□□□□ -0.1
HOXA1-202ENST00000355633 MRPL9Q9BYD2 267 aaKnown RBP14.42□□□□□ -0.1
HOXA1-202ENST00000355633 ABCB6Q9NP58 842 aa14.42□□□□□ -0.1
HOXA1-202ENST00000355633 PARVAQ9NVD7 372 aa14.42□□□□□ -0.1
HOXA1-202ENST00000355633 DNAJB4Q9UDY4 337 aa14.42□□□□□ -0.1
HOXA1-202ENST00000355633 ANAPC7Q9UJX3 599 aa14.42□□□□□ -0.1
HOXA1-202ENST00000355633 DSEQ9UL01 958 aa14.42□□□□□ -0.1
HOXA1-202ENST00000355633 STRIP2Q9ULQ0 834 aa14.42□□□□□ -0.1
HOXA1-202ENST00000355633 PACSIN2Q9UNF0 486 aaPredicted RBP14.42□□□□□ -0.1
HOXA1-202ENST00000355633 TSC2P49815 1807 aa14.42□□□□□ -0.1
HOXA1-202ENST00000355633 TMEM110-MUSTN1A8MSY1 372 aa14.42□□□□□ -0.1
HOXA1-202ENST00000355633 F8W810 466 aa14.42□□□□□ -0.1
HOXA1-202ENST00000355633 TMEM189-UBE2V1I3L0A0 370 aa14.42□□□□□ -0.1
HOXA1-202ENST00000355633 SRGAP2O75044 1071 aa14.42□□□□□ -0.1
HOXA1-202ENST00000355633 SLU7O95391 586 aaKnown RBP14.42□□□□□ -0.1
HOXA1-202ENST00000355633 CYP11A1P05108 521 aa14.42□□□□□ -0.1
HOXA1-202ENST00000355633 CCDC130P13994 396 aa14.42□□□□□ -0.1
HOXA1-202ENST00000355633 TCP1P17987 556 aaKnown RBP14.42□□□□□ -0.1
HOXA1-202ENST00000355633 ITGB8P26012 769 aa14.42□□□□□ -0.1
HOXA1-202ENST00000355633 PSMC1P62191 440 aaKnown RBP14.42□□□□□ -0.1
HOXA1-202ENST00000355633 PDCLQ13371 301 aa14.42□□□□□ -0.1
HOXA1-202ENST00000355633 MAMLD1Q13495 774 aa14.42□□□□□ -0.1
HOXA1-202ENST00000355633 PTPROQ16827 1216 aa14.42□□□□□ -0.1
HOXA1-202ENST00000355633 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.42□□□□□ -0.1
HOXA1-202ENST00000355633 NT5DC3Q86UY8 548 aa14.42□□□□□ -0.1
HOXA1-202ENST00000355633 MYRIPQ8NFW9 859 aa14.42□□□□□ -0.1
HOXA1-202ENST00000355633 VWCEQ96DN2 955 aa14.42□□□□□ -0.1
HOXA1-202ENST00000355633 SUSD3Q96L08 255 aa14.42□□□□□ -0.1
HOXA1-202ENST00000355633 CPXM1Q96SM3 734 aa14.42□□□□□ -0.1
HOXA1-202ENST00000355633 OSBPL9Q96SU4 736 aa14.42□□□□□ -0.1
HOXA1-202ENST00000355633 SYNCQ9H7C4 482 aa14.42□□□□□ -0.1
HOXA1-202ENST00000355633 NRDE2Q9H7Z3 1164 aa14.42□□□□□ -0.1
HOXA1-202ENST00000355633 AMFRQ9UKV5 643 aa14.42□□□□□ -0.1
HOXA1-202ENST00000355633 ATP2C2O75185 946 aa14.41□□□□□ -0.1
HOXA1-202ENST00000355633 PFKMP08237 780 aa14.41□□□□□ -0.1
HOXA1-202ENST00000355633 SETSIPP0DME0 302 aa14.41□□□□□ -0.1
HOXA1-202ENST00000355633 PTPN1P18031 435 aaKnown RBP14.41□□□□□ -0.1
HOXA1-202ENST00000355633 EN2P19622 333 aaPredicted RBP14.41□□□□□ -0.1
HOXA1-202ENST00000355633 ADORA2BP29275 332 aa14.41□□□□□ -0.1
HOXA1-202ENST00000355633 DNA2P51530 1060 aa14.41□□□□□ -0.1
HOXA1-202ENST00000355633 RPS6KA1Q15418 735 aa14.41□□□□□ -0.1
HOXA1-202ENST00000355633 WHAMMP3Q1A5X7 153 aa14.41□□□□□ -0.1
HOXA1-202ENST00000355633 PKDCCQ504Y2 493 aa14.41□□□□□ -0.1
HOXA1-202ENST00000355633 CYP4A22Q5TCH4 519 aa14.41□□□□□ -0.1
HOXA1-202ENST00000355633 TTC30AQ86WT1 665 aa14.41□□□□□ -0.1
HOXA1-202ENST00000355633 IPO4Q8TEX9 1081 aaKnown RBP14.41□□□□□ -0.1
HOXA1-202ENST00000355633 C18orf8Q96DM3 657 aa14.41□□□□□ -0.1
HOXA1-202ENST00000355633 BTBD6Q96KE9 485 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms