RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 SMYD3Q9H7B4 428 aa23.63■■□□□ 1.37
SNX3-202ENST00000349379 METTL14Q9HCE5 456 aaKnown RBP23.63■■□□□ 1.37
SNX3-202ENST00000349379 ARMCX3Q9UH62 379 aaPredicted RBP23.63■■□□□ 1.37
SNX3-202ENST00000349379 ASB3Q9Y575 518 aa23.63■■□□□ 1.37
SNX3-202ENST00000349379 MYH10P35580 1976 aa23.63■■□□□ 1.37
SNX3-202ENST00000349379 STX10O60499 249 aa23.62■■□□□ 1.37
SNX3-202ENST00000349379 MICAL2O94851 1124 aa23.62■■□□□ 1.37
SNX3-202ENST00000349379 GNL1P36915 607 aaPredicted RBP23.62■■□□□ 1.37
SNX3-202ENST00000349379 CCR2P41597 374 aa23.62■■□□□ 1.37
SNX3-202ENST00000349379 MXI1P50539 228 aa23.62■■□□□ 1.37
SNX3-202ENST00000349379 EPHB3P54753 998 aa23.62■■□□□ 1.37
SNX3-202ENST00000349379 MGAT5BQ3V5L5 792 aa23.62■■□□□ 1.37
SNX3-202ENST00000349379 IQCEQ6IPM2 695 aa23.62■■□□□ 1.37
SNX3-202ENST00000349379 POTEHQ6S545 545 aa23.62■■□□□ 1.37
SNX3-202ENST00000349379 FRMD5Q7Z6J6 570 aa23.62■■□□□ 1.37
SNX3-202ENST00000349379 NPAS3Q8IXF0 933 aa23.62■■□□□ 1.37
SNX3-202ENST00000349379 HS6ST3Q8IZP7 471 aa23.62■■□□□ 1.37
SNX3-202ENST00000349379 PSMG2Q969U7 264 aa23.62■■□□□ 1.37
SNX3-202ENST00000349379 SLC35C1Q96A29 364 aa23.62■■□□□ 1.37
SNX3-202ENST00000349379 SORCS3Q9UPU3 1222 aa23.62■■□□□ 1.37
SNX3-202ENST00000349379 MRPS23Q9Y3D9 190 aaKnown RBP23.62■■□□□ 1.37
SNX3-202ENST00000349379 ANAPC1Q9H1A4 1944 aa23.62■■□□□ 1.37
SNX3-202ENST00000349379 GOLGA6L22H0YM25 854 aa23.61■■□□□ 1.37
SNX3-202ENST00000349379 NRG2O14511 850 aaPredicted RBP23.61■■□□□ 1.37
SNX3-202ENST00000349379 MOSPD3O75425 235 aa23.61■■□□□ 1.37
SNX3-202ENST00000349379 ASGR2P07307 311 aa23.61■■□□□ 1.37
SNX3-202ENST00000349379 ASPAP45381 313 aa23.61■■□□□ 1.37
SNX3-202ENST00000349379 CDR1P51861 262 aa23.61■■□□□ 1.37
SNX3-202ENST00000349379 CDH8P55286 799 aa23.61■■□□□ 1.37
SNX3-202ENST00000349379 STX17P56962 302 aa23.61■■□□□ 1.37
SNX3-202ENST00000349379 PSMC1P62191 440 aaKnown RBP23.61■■□□□ 1.37
SNX3-202ENST00000349379 NOP14P78316 857 aaKnown RBP23.61■■□□□ 1.37
SNX3-202ENST00000349379 SPOPLQ6IQ16 392 aa23.61■■□□□ 1.37
SNX3-202ENST00000349379 OR6B3Q8NGW1 331 aa23.61■■□□□ 1.37
SNX3-202ENST00000349379 MED15Q96RN5 788 aa23.61■■□□□ 1.37
SNX3-202ENST00000349379 SEPT5Q99719 369 aaPredicted RBP23.61■■□□□ 1.37
SNX3-202ENST00000349379 PI4K2AQ9BTU6 479 aa23.61■■□□□ 1.37
SNX3-202ENST00000349379 BCO2Q9BYV7 579 aa23.61■■□□□ 1.37
SNX3-202ENST00000349379 SNX25Q9H3E2 840 aa23.61■■□□□ 1.37
SNX3-202ENST00000349379 MMRN2Q9H8L6 949 aa23.61■■□□□ 1.37
SNX3-202ENST00000349379 APOBEC3GQ9HC16 384 aaKnown RBP23.61■■□□□ 1.37
SNX3-202ENST00000349379 C11orf16Q9NQ32 467 aa23.61■■□□□ 1.37
SNX3-202ENST00000349379 ASAH2Q9NR71 780 aa23.61■■□□□ 1.37
SNX3-202ENST00000349379 IGSF9Q9P2J2 1179 aa23.61■■□□□ 1.37
SNX3-202ENST00000349379 COQ4Q9Y3A0 265 aa23.61■■□□□ 1.37
SNX3-202ENST00000349379 ANHXE9PGG2 379 aa23.6■■□□□ 1.37
SNX3-202ENST00000349379 ZNF197O14709 1029 aa23.6■■□□□ 1.37
SNX3-202ENST00000349379 LRRN2O75325 713 aa23.6■■□□□ 1.37
SNX3-202ENST00000349379 PDGFRBP09619 1106 aa23.6■■□□□ 1.37
SNX3-202ENST00000349379 P4HA1P13674 534 aa23.6■■□□□ 1.37
SNX3-202ENST00000349379 RAP1GAPP47736 663 aa23.6■■□□□ 1.37
SNX3-202ENST00000349379 MARSP56192 900 aaKnown RBP23.6■■□□□ 1.37
SNX3-202ENST00000349379 ZXDAP98168 799 aa23.6■■□□□ 1.37
SNX3-202ENST00000349379 MAPRE1Q15691 268 aaKnown RBP23.6■■□□□ 1.37
SNX3-202ENST00000349379 CBWD6Q4V339 395 aa23.6■■□□□ 1.37
SNX3-202ENST00000349379 CBWD3Q5JTY5 395 aa23.6■■□□□ 1.37
SNX3-202ENST00000349379 CBWD5Q5RIA9 395 aa23.6■■□□□ 1.37
SNX3-202ENST00000349379 PDZD4Q76G19 769 aaPredicted RBP23.6■■□□□ 1.37
SNX3-202ENST00000349379 DNAJB7Q7Z6W7 309 aaPredicted RBP23.6■■□□□ 1.37
SNX3-202ENST00000349379 MLKLQ8NB16 471 aa23.6■■□□□ 1.37
SNX3-202ENST00000349379 FBXL13Q8NEE6 735 aa23.6■■□□□ 1.37
SNX3-202ENST00000349379 MYCBPAPQ8TBZ2 947 aa23.6■■□□□ 1.37
SNX3-202ENST00000349379 EDAQ92838 391 aa23.6■■□□□ 1.37
SNX3-202ENST00000349379 SEMA4DQ92854 862 aa23.6■■□□□ 1.37
SNX3-202ENST00000349379 NXPE3Q969Y0 559 aa23.6■■□□□ 1.37
SNX3-202ENST00000349379 MYLPFQ96A32 169 aa23.6■■□□□ 1.37
SNX3-202ENST00000349379 TCEAL4Q96EI5 215 aa23.6■■□□□ 1.37
SNX3-202ENST00000349379 KCNK12Q9HB15 430 aa23.6■■□□□ 1.37
SNX3-202ENST00000349379 RWDD2AQ9UIY3 292 aa23.6■■□□□ 1.37
SNX3-202ENST00000349379 CEBPBP17676 345 aa23.59■■□□□ 1.37
SNX3-202ENST00000349379 MAGEA11P43364 429 aa23.59■■□□□ 1.37
SNX3-202ENST00000349379 DCAF17Q5H9S7 520 aaPredicted RBP23.59■■□□□ 1.37
SNX3-202ENST00000349379 CYP4A22Q5TCH4 519 aa23.59■■□□□ 1.37
SNX3-202ENST00000349379 TCERG1LQ5VWI1 586 aa23.59■■□□□ 1.37
SNX3-202ENST00000349379 SCARA5Q6ZMJ2 495 aa23.59■■□□□ 1.37
SNX3-202ENST00000349379 C4orf50Q6ZRC1 276 aa23.59■■□□□ 1.37
SNX3-202ENST00000349379 RBM43Q6ZSC3 357 aaKnown RBP23.59■■□□□ 1.37
SNX3-202ENST00000349379 ITIH5Q86UX2 942 aa23.59■■□□□ 1.37
SNX3-202ENST00000349379 PCED1BQ96HM7 432 aa23.59■■□□□ 1.37
SNX3-202ENST00000349379 FAXDC2Q96IV6 333 aa23.59■■□□□ 1.37
SNX3-202ENST00000349379 LPIN3Q9BQK8 851 aa23.59■■□□□ 1.37
SNX3-202ENST00000349379 IMPG2Q9BZV3 1241 aa23.59■■□□□ 1.37
SNX3-202ENST00000349379 DPEP3Q9H4B8 488 aa23.59■■□□□ 1.37
SNX3-202ENST00000349379 GDE1Q9NZC3 331 aa23.59■■□□□ 1.37
SNX3-202ENST00000349379 PATJQ8NI35 1801 aa23.59■■□□□ 1.37
SNX3-202ENST00000349379 A8MXQ7 604 aa23.58■■□□□ 1.37
SNX3-202ENST00000349379 PTPN1P18031 435 aaKnown RBP23.58■■□□□ 1.37
SNX3-202ENST00000349379 CYP2F1P24903 491 aa23.58■■□□□ 1.37
SNX3-202ENST00000349379 HTR4Q13639 388 aa23.58■■□□□ 1.37
SNX3-202ENST00000349379 SPATA2LQ8IUW3 424 aaPredicted RBP23.58■■□□□ 1.37
SNX3-202ENST00000349379 B3GALNT2Q8NCR0 500 aa23.58■■□□□ 1.37
SNX3-202ENST00000349379 ING5Q8WYH8 240 aa23.58■■□□□ 1.37
SNX3-202ENST00000349379 C1QTNF1Q9BXJ1 281 aa23.58■■□□□ 1.37
SNX3-202ENST00000349379 NIF3L1Q9GZT8 377 aa23.58■■□□□ 1.37
SNX3-202ENST00000349379 ZNF334Q9HCZ1 680 aaPredicted RBP23.58■■□□□ 1.37
SNX3-202ENST00000349379 RAB20Q9NX57 234 aa23.58■■□□□ 1.37
SNX3-202ENST00000349379 PMM2O15305 246 aa23.57■■□□□ 1.36
SNX3-202ENST00000349379 GNA14O95837 355 aa23.57■■□□□ 1.36
SNX3-202ENST00000349379 GPR15P49685 360 aa23.57■■□□□ 1.36
SNX3-202ENST00000349379 INCA1Q0VD86 236 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms