RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 STX7O15400 261 aaKnown RBP24.06■■□□□ 1.44
NPAS3-201ENST00000346562 TMEM253P0C7T8 217 aa24.06■■□□□ 1.44
NPAS3-201ENST00000346562 PDHBP11177 359 aa24.06■■□□□ 1.44
NPAS3-201ENST00000346562 ANKS6Q68DC2 871 aa24.06■■□□□ 1.44
NPAS3-201ENST00000346562 ERAP2Q6P179 960 aa24.06■■□□□ 1.44
NPAS3-201ENST00000346562 FRMD8Q9BZ67 464 aaPredicted RBP24.06■■□□□ 1.44
NPAS3-201ENST00000346562 FHOD1Q9Y613 1164 aa24.06■■□□□ 1.44
NPAS3-201ENST00000346562 F5H5T6 163 aa24.06■■□□□ 1.44
NPAS3-201ENST00000346562 SERPINI2O75830 405 aa24.06■■□□□ 1.44
NPAS3-201ENST00000346562 SGO1Q5FBB7 561 aa24.06■■□□□ 1.44
NPAS3-201ENST00000346562 CYP4A22Q5TCH4 519 aa24.06■■□□□ 1.44
NPAS3-201ENST00000346562 LONP2Q86WA8 852 aa24.06■■□□□ 1.44
NPAS3-201ENST00000346562 OSBPL8Q9BZF1 889 aa24.06■■□□□ 1.44
NPAS3-201ENST00000346562 SCN3BQ9NY72 215 aa24.06■■□□□ 1.44
NPAS3-201ENST00000346562 RNASEH1O60930 286 aaKnown RBP24.05■■□□□ 1.44
NPAS3-201ENST00000346562 FEZF2Q8TBJ5 459 aa24.05■■□□□ 1.44
NPAS3-201ENST00000346562 FAM167BQ9BTA0 163 aa24.05■■□□□ 1.44
NPAS3-201ENST00000346562 CCDC134Q9H6E4 229 aa24.05■■□□□ 1.44
NPAS3-201ENST00000346562 ENTPD7Q9NQZ7 604 aa24.05■■□□□ 1.44
NPAS3-201ENST00000346562 THPOP40225 353 aa24.05■■□□□ 1.44
NPAS3-201ENST00000346562 E2F4Q16254 413 aa24.05■■□□□ 1.44
NPAS3-201ENST00000346562 CD302Q8IX05 232 aa24.05■■□□□ 1.44
NPAS3-201ENST00000346562 PPIL6Q8IXY8 311 aa24.05■■□□□ 1.44
NPAS3-201ENST00000346562 KRT78Q8N1N4 520 aa24.05■■□□□ 1.44
NPAS3-201ENST00000346562 AGGF1Q8N302 714 aaeCLIP24.05■■□□□ 1.44
NPAS3-201ENST00000346562 TMEM169Q96HH4 297 aa24.05■■□□□ 1.44
NPAS3-201ENST00000346562 SPASTQ9UBP0 616 aa24.05■■□□□ 1.44
NPAS3-201ENST00000346562 CYTH3O43739 400 aa24.05■■□□□ 1.44
NPAS3-201ENST00000346562 DIS3LQ8TF46 1054 aaKnown RBP24.05■■□□□ 1.44
NPAS3-201ENST00000346562 SPATA31A6Q5VVP1 1343 aa24.05■■□□□ 1.44
NPAS3-201ENST00000346562 DDHD2O94830 711 aa24.05■■□□□ 1.44
NPAS3-201ENST00000346562 MFSD4BQ5TF39 518 aa24.05■■□□□ 1.44
NPAS3-201ENST00000346562 EME1Q96AY2 570 aa24.05■■□□□ 1.44
NPAS3-201ENST00000346562 MS4A14Q96JA4 679 aa24.05■■□□□ 1.44
NPAS3-201ENST00000346562 A0A1W2PQJ5 194 aa24.04■■□□□ 1.44
NPAS3-201ENST00000346562 MYMKA6NI61 221 aa24.04■■□□□ 1.44
NPAS3-201ENST00000346562 EIF3LQ9Y262 564 aaKnown RBP24.04■■□□□ 1.44
NPAS3-201ENST00000346562 ZBTB12Q9Y330 459 aaPredicted RBP24.04■■□□□ 1.44
NPAS3-201ENST00000346562 CAB39Q9Y376 341 aaPredicted RBP24.04■■□□□ 1.44
NPAS3-201ENST00000346562 MDH1P40925 334 aaKnown RBP24.04■■□□□ 1.44
NPAS3-201ENST00000346562 ITGB3P05106 788 aa24.04■■□□□ 1.44
NPAS3-201ENST00000346562 ZC2HC1CQ53FD0 456 aaPredicted RBP24.04■■□□□ 1.44
NPAS3-201ENST00000346562 CYFIP2Q96F07 1278 aa24.04■■□□□ 1.44
NPAS3-201ENST00000346562 EMILIN2Q9BXX0 1053 aa24.04■■□□□ 1.44
NPAS3-201ENST00000346562 SLC39A10Q9ULF5 831 aa24.04■■□□□ 1.44
NPAS3-201ENST00000346562 C2CD2LO14523 706 aa24.04■■□□□ 1.44
NPAS3-201ENST00000346562 DYRK3O43781 588 aa24.04■■□□□ 1.44
NPAS3-201ENST00000346562 PMS1P54277 932 aaKnown RBP24.04■■□□□ 1.44
NPAS3-201ENST00000346562 MAP3K7CLP57077 242 aa24.04■■□□□ 1.44
NPAS3-201ENST00000346562 RABL6Q3YEC7 729 aaPredicted RBP24.04■■□□□ 1.44
NPAS3-201ENST00000346562 C4orf33Q8N1A6 199 aa24.04■■□□□ 1.44
NPAS3-201ENST00000346562 C17orf75Q9HAS0 396 aa24.04■■□□□ 1.44
NPAS3-201ENST00000346562 GUCY1A3Q02108 690 aa24.04■■□□□ 1.44
NPAS3-201ENST00000346562 OSBPL10Q9BXB5 764 aa24.04■■□□□ 1.44
NPAS3-201ENST00000346562 WDCPQ9H6R7 721 aa24.04■■□□□ 1.44
NPAS3-201ENST00000346562 FAM83EQ2M2I3 478 aa24.03■■□□□ 1.44
NPAS3-201ENST00000346562 CACHD1Q5VU97 1274 aa24.03■■□□□ 1.44
NPAS3-201ENST00000346562 WNK4Q96J92 1243 aa24.03■■□□□ 1.44
NPAS3-201ENST00000346562 MAP3K14Q99558 947 aa24.03■■□□□ 1.44
NPAS3-201ENST00000346562 ROPN1BQ9BZX4 212 aaPredicted RBP24.03■■□□□ 1.44
NPAS3-201ENST00000346562 ROPN1Q9HAT0 212 aaPredicted RBP24.03■■□□□ 1.44
NPAS3-201ENST00000346562 BRD2P25440 801 aaKnown RBP24.03■■□□□ 1.44
NPAS3-201ENST00000346562 AGBL2Q5U5Z8 902 aa24.03■■□□□ 1.44
NPAS3-201ENST00000346562 FRMD8P1Q9BZ68 369 aaPredicted RBP24.03■■□□□ 1.44
NPAS3-201ENST00000346562 ADCY3O60266 1144 aa24.03■■□□□ 1.44
NPAS3-201ENST00000346562 MAGEA4P43358 317 aa24.03■■□□□ 1.44
NPAS3-201ENST00000346562 ZNF484Q5JVG2 852 aa24.03■■□□□ 1.44
NPAS3-201ENST00000346562 ZNF34Q8IZ26 560 aa24.03■■□□□ 1.44
NPAS3-201ENST00000346562 EPN3Q9H201 632 aa24.03■■□□□ 1.44
NPAS3-201ENST00000346562 COPS7BQ9H9Q2 264 aaPredicted RBP24.03■■□□□ 1.44
NPAS3-201ENST00000346562 MBL2P11226 248 aaPredicted RBP24.03■■□□□ 1.44
NPAS3-201ENST00000346562 KCNH7Q9NS40 1196 aa24.03■■□□□ 1.44
NPAS3-201ENST00000346562 ASS1P00966 412 aaKnown RBP24.02■■□□□ 1.44
NPAS3-201ENST00000346562 COMTP21964 271 aa24.02■■□□□ 1.44
NPAS3-201ENST00000346562 C3orf62Q6ZUJ4 267 aa24.02■■□□□ 1.44
NPAS3-201ENST00000346562 AGBL3Q8NEM8 1001 aa24.02■■□□□ 1.44
NPAS3-201ENST00000346562 SCUBE2Q9NQ36 999 aa24.02■■□□□ 1.44
NPAS3-201ENST00000346562 APPL1Q9UKG1 709 aa24.02■■□□□ 1.44
NPAS3-201ENST00000346562 PRG3Q9Y2Y8 225 aaPredicted RBP24.02■■□□□ 1.44
NPAS3-201ENST00000346562 DCDC2CA8MYV0 355 aa24.02■■□□□ 1.44
NPAS3-201ENST00000346562 F8W810 466 aa24.02■■□□□ 1.44
NPAS3-201ENST00000346562 CST8O60676 142 aa24.02■■□□□ 1.44
NPAS3-201ENST00000346562 RPLP2P05387 115 aaKnown RBP24.02■■□□□ 1.44
NPAS3-201ENST00000346562 CCDC159P0C7I6 412 aa24.02■■□□□ 1.44
NPAS3-201ENST00000346562 MAPK1P28482 360 aa24.02■■□□□ 1.44
NPAS3-201ENST00000346562 FXR2P51116 673 aaKnown RBP eCLIP24.02■■□□□ 1.44
NPAS3-201ENST00000346562 TIGD7Q6NT04 549 aaPredicted RBP24.02■■□□□ 1.44
NPAS3-201ENST00000346562 MARCOQ9UEW3 520 aaPredicted RBP24.02■■□□□ 1.44
NPAS3-201ENST00000346562 TTLL13PA6NNM8 815 aa24.02■■□□□ 1.44
NPAS3-201ENST00000346562 USP27XA6NNY8 438 aa24.02■■□□□ 1.44
NPAS3-201ENST00000346562 NBPF26B4DH59 902 aa24.02■■□□□ 1.44
NPAS3-201ENST00000346562 IFNEQ86WN2 208 aa24.02■■□□□ 1.44
NPAS3-201ENST00000346562 NBPF15Q8N660 670 aa24.02■■□□□ 1.44
NPAS3-201ENST00000346562 JMJD4Q9H9V9 463 aa24.02■■□□□ 1.44
NPAS3-201ENST00000346562 USP15Q9Y4E8 981 aaPredicted RBP24.02■■□□□ 1.44
NPAS3-201ENST00000346562 FAM47E-STBD1D6RA91 191 aa24.02■■□□□ 1.44
NPAS3-201ENST00000346562 ZNF185O15231 689 aa24.02■■□□□ 1.44
NPAS3-201ENST00000346562 RASA1P20936 1047 aa24.02■■□□□ 1.44
NPAS3-201ENST00000346562 MRPS31Q92665 395 aaKnown RBP24.02■■□□□ 1.44
NPAS3-201ENST00000346562 ZNF669Q96BR6 464 aaPredicted RBP24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms