RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 TOP6BLQ8N6T0 577 aa15.49■□□□□ 0.07
HMGN3-202ENST00000344726 STKLD1Q8NE28 680 aa15.49■□□□□ 0.07
HMGN3-202ENST00000344726 ZSCAN18Q8TBC5 510 aaPredicted RBP15.49■□□□□ 0.07
HMGN3-202ENST00000344726 KBTBD7Q8WVZ9 684 aa15.49■□□□□ 0.07
HMGN3-202ENST00000344726 SMARCD2Q92925 531 aa15.49■□□□□ 0.07
HMGN3-202ENST00000344726 PSMG2Q969U7 264 aa15.49■□□□□ 0.07
HMGN3-202ENST00000344726 FNBP1Q96RU3 617 aa15.49■□□□□ 0.07
HMGN3-202ENST00000344726 ZFP14Q9HCL3 533 aa15.49■□□□□ 0.07
HMGN3-202ENST00000344726 HEBP1Q9NRV9 189 aa15.49■□□□□ 0.07
HMGN3-202ENST00000344726 ABI2Q9NYB9 513 aaPredicted RBP15.49■□□□□ 0.07
HMGN3-202ENST00000344726 SIT1Q9Y3P8 196 aa15.49■□□□□ 0.07
HMGN3-202ENST00000344726 CACNA1IQ9P0X4 2223 aa15.49■□□□□ 0.07
HMGN3-202ENST00000344726 PATJQ8NI35 1801 aa15.49■□□□□ 0.07
HMGN3-202ENST00000344726 KANSL1LA0AUZ9 987 aa15.48■□□□□ 0.07
HMGN3-202ENST00000344726 PDXKO00764 312 aa15.48■□□□□ 0.07
HMGN3-202ENST00000344726 HAPLN1P10915 354 aaPredicted RBP15.48■□□□□ 0.07
HMGN3-202ENST00000344726 RFX1P22670 979 aa15.48■□□□□ 0.07
HMGN3-202ENST00000344726 GPR15P49685 360 aa15.48■□□□□ 0.07
HMGN3-202ENST00000344726 MYO1EQ12965 1108 aa15.48■□□□□ 0.07
HMGN3-202ENST00000344726 INTS6LQ5JSJ4 861 aaKnown RBP15.48■□□□□ 0.07
HMGN3-202ENST00000344726 ASCL5Q7RTU5 278 aa15.48■□□□□ 0.07
HMGN3-202ENST00000344726 FRMD5Q7Z6J6 570 aa15.48■□□□□ 0.07
HMGN3-202ENST00000344726 GPIHBP1Q8IV16 184 aa15.48■□□□□ 0.07
HMGN3-202ENST00000344726 SLC9A9Q8IVB4 645 aa15.48■□□□□ 0.07
HMGN3-202ENST00000344726 DCP1BQ8IZD4 617 aaKnown RBP15.48■□□□□ 0.07
HMGN3-202ENST00000344726 FMR1NBQ8N0W7 255 aaPredicted RBP15.48■□□□□ 0.07
HMGN3-202ENST00000344726 LEMD2Q8NC56 503 aa15.48■□□□□ 0.07
HMGN3-202ENST00000344726 GOLGA5Q8TBA6 731 aa15.48■□□□□ 0.07
HMGN3-202ENST00000344726 SPPL2BQ8TCT7 592 aa15.48■□□□□ 0.07
HMGN3-202ENST00000344726 C2orf15Q8WU43 125 aaKnown RBP15.48■□□□□ 0.07
HMGN3-202ENST00000344726 TMEM174Q8WUU8 243 aa15.48■□□□□ 0.07
HMGN3-202ENST00000344726 ACBD6Q9BR61 282 aa15.48■□□□□ 0.07
HMGN3-202ENST00000344726 TRPV4Q9HBA0 871 aa15.48■□□□□ 0.07
HMGN3-202ENST00000344726 IL21Q9HBE4 155 aa15.48■□□□□ 0.07
HMGN3-202ENST00000344726 ASB3Q9Y575 518 aa15.48■□□□□ 0.07
HMGN3-202ENST00000344726 NME7Q9Y5B8 376 aa15.48■□□□□ 0.07
HMGN3-202ENST00000344726 WDR87Q6ZQQ6 2873 aa15.48■□□□□ 0.07
HMGN3-202ENST00000344726 KIF26AQ9ULI4 1882 aaPredicted RBP15.48■□□□□ 0.07
HMGN3-202ENST00000344726 LRRIQ3A6PVS8 624 aaPredicted RBP15.47■□□□□ 0.07
HMGN3-202ENST00000344726 ARNTLO00327 626 aa15.47■□□□□ 0.07
HMGN3-202ENST00000344726 NR3C1P04150 777 aa15.47■□□□□ 0.07
HMGN3-202ENST00000344726 LMO2P25791 158 aa15.47■□□□□ 0.07
HMGN3-202ENST00000344726 TUFMP49411 452 aaKnown RBP15.47■□□□□ 0.07
HMGN3-202ENST00000344726 CYP4F8P98187 520 aa15.47■□□□□ 0.07
HMGN3-202ENST00000344726 MYL7Q01449 175 aa15.47■□□□□ 0.07
HMGN3-202ENST00000344726 TSPY1Q01534 308 aa15.47■□□□□ 0.07
HMGN3-202ENST00000344726 PFKPQ01813 784 aa15.47■□□□□ 0.07
HMGN3-202ENST00000344726 PRKCQQ04759 706 aa15.47■□□□□ 0.07
HMGN3-202ENST00000344726 SMARCB1Q12824 385 aa15.47■□□□□ 0.07
HMGN3-202ENST00000344726 TPRG1Q6ZUI0 275 aa15.47■□□□□ 0.07
HMGN3-202ENST00000344726 MAML2Q8IZL2 1156 aaPredicted RBP15.47■□□□□ 0.07
HMGN3-202ENST00000344726 ZNF687Q8N1G0 1237 aa15.47■□□□□ 0.07
HMGN3-202ENST00000344726 ENGASEQ8NFI3 743 aa15.47■□□□□ 0.07
HMGN3-202ENST00000344726 SPATA18Q8TC71 538 aa15.47■□□□□ 0.07
HMGN3-202ENST00000344726 PARD3BQ8TEW8 1205 aa15.47■□□□□ 0.07
HMGN3-202ENST00000344726 GIPC2Q8TF65 315 aa15.47■□□□□ 0.07
HMGN3-202ENST00000344726 LRRC3BQ96PB8 259 aa15.47■□□□□ 0.07
HMGN3-202ENST00000344726 PI4K2AQ9BTU6 479 aa15.47■□□□□ 0.07
HMGN3-202ENST00000344726 IRF2BPLQ9H1B7 796 aa15.47■□□□□ 0.07
HMGN3-202ENST00000344726 LTB4R2Q9NPC1 389 aa15.47■□□□□ 0.07
HMGN3-202ENST00000344726 GTF3C4Q9UKN8 822 aa15.47■□□□□ 0.07
HMGN3-202ENST00000344726 MAPK8IP1Q9UQF2 711 aa15.47■□□□□ 0.07
HMGN3-202ENST00000344726 PCDHB5Q9Y5E4 795 aa15.47■□□□□ 0.07
HMGN3-202ENST00000344726 MYH10P35580 1976 aa15.46■□□□□ 0.07
HMGN3-202ENST00000344726 MYBPHLA2RUH7 354 aa15.46■□□□□ 0.07
HMGN3-202ENST00000344726 HEPACAM2A8MVW5 462 aa15.46■□□□□ 0.07
HMGN3-202ENST00000344726 GFRA3O60609 400 aa15.46■□□□□ 0.07
HMGN3-202ENST00000344726 ATP2C2O75185 946 aa15.46■□□□□ 0.07
HMGN3-202ENST00000344726 PRPF40AO75400 957 aaKnown RBP15.46■□□□□ 0.07
HMGN3-202ENST00000344726 PRAMEF12O95522 483 aa15.46■□□□□ 0.07
HMGN3-202ENST00000344726 PSMC3P17980 439 aa15.46■□□□□ 0.07
HMGN3-202ENST00000344726 TARSP26639 723 aaKnown RBP15.46■□□□□ 0.07
HMGN3-202ENST00000344726 GABRR2P28476 465 aa15.46■□□□□ 0.07
HMGN3-202ENST00000344726 LHX1P48742 406 aa15.46■□□□□ 0.07
HMGN3-202ENST00000344726 MYL6P60660 151 aa15.46■□□□□ 0.07
HMGN3-202ENST00000344726 DLG4P78352 724 aa15.46■□□□□ 0.07
HMGN3-202ENST00000344726 CLDN10P78369 228 aa15.46■□□□□ 0.07
HMGN3-202ENST00000344726 FZD5Q13467 585 aa15.46■□□□□ 0.07
HMGN3-202ENST00000344726 PNOCQ13519 176 aa15.46■□□□□ 0.07
HMGN3-202ENST00000344726 KCNB1Q14721 858 aa15.46■□□□□ 0.07
HMGN3-202ENST00000344726 UBXN2BQ14CS0 331 aa15.46■□□□□ 0.07
HMGN3-202ENST00000344726 SDHAF4Q5VUM1 108 aa15.46■□□□□ 0.07
HMGN3-202ENST00000344726 TDRD10Q5VZ19 366 aaKnown RBP15.46■□□□□ 0.07
HMGN3-202ENST00000344726 DPH6Q7L8W6 267 aa15.46■□□□□ 0.07
HMGN3-202ENST00000344726 TMEM150AQ86TG1 271 aa15.46■□□□□ 0.07
HMGN3-202ENST00000344726 ELMO3Q96BJ8 720 aa15.46■□□□□ 0.07
HMGN3-202ENST00000344726 SHDQ96IW2 340 aa15.46■□□□□ 0.07
HMGN3-202ENST00000344726 MRPL45Q9BRJ2 306 aaKnown RBP15.46■□□□□ 0.07
HMGN3-202ENST00000344726 TRMT61BQ9BVS5 477 aaKnown RBP15.46■□□□□ 0.07
HMGN3-202ENST00000344726 XYLT2Q9H1B5 865 aa15.46■□□□□ 0.07
HMGN3-202ENST00000344726 TRAF3IP3Q9Y228 551 aa15.46■□□□□ 0.07
HMGN3-202ENST00000344726 R3HCC1Q9Y3T6 440 aaKnown RBP15.46■□□□□ 0.07
HMGN3-202ENST00000344726 FAM170BA6NMN3 283 aa15.45■□□□□ 0.06
HMGN3-202ENST00000344726 VNN1O95497 513 aa15.45■□□□□ 0.06
HMGN3-202ENST00000344726 C4BPAP04003 597 aaKnown RBP15.45■□□□□ 0.06
HMGN3-202ENST00000344726 HMGA1P17096 107 aaKnown RBP15.45■□□□□ 0.06
HMGN3-202ENST00000344726 WARSP23381 471 aaKnown RBP15.45■□□□□ 0.06
HMGN3-202ENST00000344726 CYP2F1P24903 491 aa15.45■□□□□ 0.06
HMGN3-202ENST00000344726 GDI1P31150 447 aa15.45■□□□□ 0.06
HMGN3-202ENST00000344726 PSMC1P62191 440 aaKnown RBP15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms