RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 EMC1Q8N766 993 aa14.38□□□□□ -0.11
CDC42-202ENST00000344548 SLAIN1Q8ND83 568 aa14.38□□□□□ -0.11
CDC42-202ENST00000344548 ADAM2Q99965 735 aa14.38□□□□□ -0.11
CDC42-202ENST00000344548 CHST12Q9NRB3 414 aa14.38□□□□□ -0.11
CDC42-202ENST00000344548 TTC7AQ9ULT0 858 aaPredicted RBP14.38□□□□□ -0.11
CDC42-202ENST00000344548 FRMPD3Q5JV73 1810 aa14.37□□□□□ -0.11
CDC42-202ENST00000344548 TARSL2A2RTX5 802 aaKnown RBP14.37□□□□□ -0.11
CDC42-202ENST00000344548 MOXD2PA6NHM9 499 aa14.37□□□□□ -0.11
CDC42-202ENST00000344548 SART1O43290 800 aaKnown RBP14.37□□□□□ -0.11
CDC42-202ENST00000344548 GNRH1P01148 92 aa14.37□□□□□ -0.11
CDC42-202ENST00000344548 CD4P01730 458 aa14.37□□□□□ -0.11
CDC42-202ENST00000344548 CLCNKBP51801 687 aa14.37□□□□□ -0.11
CDC42-202ENST00000344548 PAK2Q13177 524 aa14.37□□□□□ -0.11
CDC42-202ENST00000344548 PDCLQ13371 301 aa14.37□□□□□ -0.11
CDC42-202ENST00000344548 BRD3Q15059 726 aa14.37□□□□□ -0.11
CDC42-202ENST00000344548 LIMS2Q7Z4I7 341 aa14.37□□□□□ -0.11
CDC42-202ENST00000344548 XYLT1Q86Y38 959 aa14.37□□□□□ -0.11
CDC42-202ENST00000344548 SLC43A3Q8NBI5 491 aa14.37□□□□□ -0.11
CDC42-202ENST00000344548 DDX27Q96GQ7 796 aaKnown RBP14.37□□□□□ -0.11
CDC42-202ENST00000344548 FUT8Q9BYC5 575 aa14.37□□□□□ -0.11
CDC42-202ENST00000344548 STARD7Q9NQZ5 370 aa14.37□□□□□ -0.11
CDC42-202ENST00000344548 ARGLU1Q9NWB6 273 aaPredicted RBP14.37□□□□□ -0.11
CDC42-202ENST00000344548 AMACRQ9UHK6 382 aa14.37□□□□□ -0.11
CDC42-202ENST00000344548 A8MXQ7 604 aa14.36□□□□□ -0.11
CDC42-202ENST00000344548 MED7O43513 233 aa14.36□□□□□ -0.11
CDC42-202ENST00000344548 ATP2C2O75185 946 aa14.36□□□□□ -0.11
CDC42-202ENST00000344548 CABYRO75952 493 aa14.36□□□□□ -0.11
CDC42-202ENST00000344548 CALB1P05937 261 aa14.36□□□□□ -0.11
CDC42-202ENST00000344548 CCDC130P13994 396 aa14.36□□□□□ -0.11
CDC42-202ENST00000344548 RGS7P49802 495 aa14.36□□□□□ -0.11
CDC42-202ENST00000344548 TAF6P49848 677 aa14.36□□□□□ -0.11
CDC42-202ENST00000344548 GOLGA7BQ2TAP0 167 aa14.36□□□□□ -0.11
CDC42-202ENST00000344548 PKDCCQ504Y2 493 aa14.36□□□□□ -0.11
CDC42-202ENST00000344548 FAM26DQ5JW98 314 aa14.36□□□□□ -0.11
CDC42-202ENST00000344548 PMF1Q6P1K2 205 aa14.36□□□□□ -0.11
CDC42-202ENST00000344548 DNAJC24Q6P3W2 148 aa14.36□□□□□ -0.11
CDC42-202ENST00000344548 LCLAT1Q6UWP7 414 aa14.36□□□□□ -0.11
CDC42-202ENST00000344548 CCNI2Q6ZMN8 369 aaPredicted RBP14.36□□□□□ -0.11
CDC42-202ENST00000344548 ARFGAP1Q8N6T3 406 aa14.36□□□□□ -0.11
CDC42-202ENST00000344548 UBL4BQ8N7F7 174 aa14.36□□□□□ -0.11
CDC42-202ENST00000344548 CALR3Q96L12 384 aaKnown RBP14.36□□□□□ -0.11
CDC42-202ENST00000344548 TSPYL2Q9H2G4 693 aaPredicted RBP14.36□□□□□ -0.11
CDC42-202ENST00000344548 MRPL47Q9HD33 250 aaKnown RBP14.36□□□□□ -0.11
CDC42-202ENST00000344548 GDAP2Q9NXN4 497 aa14.36□□□□□ -0.11
CDC42-202ENST00000344548 CCDC66A2RUB6 948 aa14.36□□□□□ -0.11
CDC42-202ENST00000344548 CASTOR2A6NHX0 329 aa14.36□□□□□ -0.11
CDC42-202ENST00000344548 POMCP01189 267 aa14.36□□□□□ -0.11
CDC42-202ENST00000344548 LRPAP1P30533 357 aa14.36□□□□□ -0.11
CDC42-202ENST00000344548 SIX1Q15475 284 aaPredicted RBP14.36□□□□□ -0.11
CDC42-202ENST00000344548 RAB6CQ53S08 254 aa14.36□□□□□ -0.11
CDC42-202ENST00000344548 KIAA0319Q5VV43 1072 aa14.36□□□□□ -0.11
CDC42-202ENST00000344548 TRNP1Q6NT89 227 aa14.36□□□□□ -0.11
CDC42-202ENST00000344548 MRPL10Q7Z7H8 261 aaKnown RBP14.36□□□□□ -0.11
CDC42-202ENST00000344548 C3orf20Q8ND61 904 aa14.36□□□□□ -0.11
CDC42-202ENST00000344548 ACSF2Q96CM8 615 aaPredicted RBP14.36□□□□□ -0.11
CDC42-202ENST00000344548 C18orf8Q96DM3 657 aa14.36□□□□□ -0.11
CDC42-202ENST00000344548 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.36□□□□□ -0.111e-9■■■■■ 28.6
CDC42-202ENST00000344548 RAB6CQ9H0N0 254 aa14.36□□□□□ -0.11
CDC42-202ENST00000344548 ARFGAP3Q9NP61 516 aa14.36□□□□□ -0.11
CDC42-202ENST00000344548 ST7Q9NRC1 585 aa14.36□□□□□ -0.11
CDC42-202ENST00000344548 KLHL11Q9NVR0 708 aa14.36□□□□□ -0.11
CDC42-202ENST00000344548 STIM2Q9P246 746 aa14.36□□□□□ -0.11
CDC42-202ENST00000344548 TIMM13Q9Y5L4 95 aaPredicted RBP14.36□□□□□ -0.11
CDC42-202ENST00000344548 SCINQ9Y6U3 715 aa14.36□□□□□ -0.11
CDC42-202ENST00000344548 A0A0U1RQF3 1178 aa14.35□□□□□ -0.11
CDC42-202ENST00000344548 E5RJQ4 531 aa14.35□□□□□ -0.11
CDC42-202ENST00000344548 F8W810 466 aa14.35□□□□□ -0.11
CDC42-202ENST00000344548 HEXIM1O94992 359 aaKnown RBP14.35□□□□□ -0.11
CDC42-202ENST00000344548 ACAT1P24752 427 aaKnown RBP14.35□□□□□ -0.11
CDC42-202ENST00000344548 GJC1P36383 396 aa14.35□□□□□ -0.11
CDC42-202ENST00000344548 CARSP49589 748 aaKnown RBP14.35□□□□□ -0.11
CDC42-202ENST00000344548 PSMC1P62191 440 aaKnown RBP14.35□□□□□ -0.11
CDC42-202ENST00000344548 GPNMBQ14956 572 aa14.35□□□□□ -0.11
CDC42-202ENST00000344548 PRELID2Q8N945 189 aa14.35□□□□□ -0.11
CDC42-202ENST00000344548 HNRNPLLQ8WVV9 542 aaKnown RBP14.35□□□□□ -0.11
CDC42-202ENST00000344548 LINC01599Q8WXQ3 324 aa14.35□□□□□ -0.11
CDC42-202ENST00000344548 CEP83Q9Y592 693 aa14.35□□□□□ -0.11
CDC42-202ENST00000344548 B4GALT3O60512 393 aa14.35□□□□□ -0.11
CDC42-202ENST00000344548 THP07101 528 aa14.35□□□□□ -0.11
CDC42-202ENST00000344548 TKTP29401 623 aaKnown RBP14.35□□□□□ -0.11
CDC42-202ENST00000344548 GNL1P36915 607 aaPredicted RBP14.35□□□□□ -0.11
CDC42-202ENST00000344548 RWDD2BP57060 319 aa14.35□□□□□ -0.11
CDC42-202ENST00000344548 GUCY2DQ02846 1103 aa14.35□□□□□ -0.11
CDC42-202ENST00000344548 TAF5Q15542 800 aa14.35□□□□□ -0.11
CDC42-202ENST00000344548 PAN2Q504Q3 1202 aaKnown RBP14.35□□□□□ -0.11
CDC42-202ENST00000344548 WSCD1Q658N2 575 aa14.35□□□□□ -0.11
CDC42-202ENST00000344548 DCUN1D2Q6PH85 259 aa14.35□□□□□ -0.11
CDC42-202ENST00000344548 DDX42Q86XP3 938 aaKnown RBP eCLIP14.35□□□□□ -0.11
CDC42-202ENST00000344548 TSEN34Q9BSV6 310 aaKnown RBP14.35□□□□□ -0.11
CDC42-202ENST00000344548 B3GNT5Q9BYG0 378 aa14.35□□□□□ -0.11
CDC42-202ENST00000344548 EPB41L5Q9HCM4 733 aa14.35□□□□□ -0.11
CDC42-202ENST00000344548 METTL5Q9NRN9 209 aaKnown RBP14.35□□□□□ -0.11
CDC42-202ENST00000344548 I3L4J1 428 aa14.34□□□□□ -0.11
CDC42-202ENST00000344548 TTI1O43156 1089 aa14.34□□□□□ -0.11
CDC42-202ENST00000344548 ZNF623O75123 536 aa14.34□□□□□ -0.11
CDC42-202ENST00000344548 ADCY2Q08462 1091 aa14.34□□□□□ -0.11
CDC42-202ENST00000344548 PDE4CQ08493 712 aa14.34□□□□□ -0.11
CDC42-202ENST00000344548 SH3PXD2AQ5TCZ1 1133 aa14.34□□□□□ -0.11
CDC42-202ENST00000344548 TTC27Q6P3X3 843 aa14.34□□□□□ -0.11
CDC42-202ENST00000344548 APPL2Q8NEU8 664 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms