RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 KRBA1A5PL33 1030 aa17.2■□□□□ 0.34
ATG4B-201ENST00000344376 LRRIQ3A6PVS8 624 aaPredicted RBP17.2■□□□□ 0.34
ATG4B-201ENST00000344376 CST3P01034 146 aaPredicted RBP17.2■□□□□ 0.34
ATG4B-201ENST00000344376 FAM163BP0C2L3 166 aa17.2■□□□□ 0.34
ATG4B-201ENST00000344376 NPR3P17342 541 aa17.2■□□□□ 0.34
ATG4B-201ENST00000344376 AOC1P19801 751 aa17.2■□□□□ 0.34
ATG4B-201ENST00000344376 NR2F2P24468 414 aa17.2■□□□□ 0.34
ATG4B-201ENST00000344376 MYL6P60660 151 aa17.2■□□□□ 0.34
ATG4B-201ENST00000344376 CLDN10P78369 228 aa17.2■□□□□ 0.34
ATG4B-201ENST00000344376 PNOCQ13519 176 aa17.2■□□□□ 0.34
ATG4B-201ENST00000344376 SNW1Q13573 536 aaKnown RBP17.2■□□□□ 0.34
ATG4B-201ENST00000344376 NFIL3Q16649 462 aa17.2■□□□□ 0.34
ATG4B-201ENST00000344376 TMEM105Q8N8V8 129 aa17.2■□□□□ 0.34
ATG4B-201ENST00000344376 TMC2Q8TDI7 906 aa17.2■□□□□ 0.34
ATG4B-201ENST00000344376 GIPC2Q8TF65 315 aa17.2■□□□□ 0.34
ATG4B-201ENST00000344376 KBTBD7Q8WVZ9 684 aa17.2■□□□□ 0.34
ATG4B-201ENST00000344376 ZNF516Q92618 1163 aa17.2■□□□□ 0.34
ATG4B-201ENST00000344376 FUBP3Q96I24 572 aaKnown RBP eCLIP17.2■□□□□ 0.34
ATG4B-201ENST00000344376 IRF2BPLQ9H1B7 796 aa17.2■□□□□ 0.34
ATG4B-201ENST00000344376 TBC1D17Q9HA65 648 aa17.2■□□□□ 0.34
ATG4B-201ENST00000344376 MAPK13O15264 365 aa17.19■□□□□ 0.34
ATG4B-201ENST00000344376 TACC1O75410 805 aa17.19■□□□□ 0.34
ATG4B-201ENST00000344376 CSH1P0DML2 217 aa17.19■□□□□ 0.34
ATG4B-201ENST00000344376 CSH2P0DML3 217 aa17.19■□□□□ 0.34
ATG4B-201ENST00000344376 FCARP24071 287 aa17.19■□□□□ 0.34
ATG4B-201ENST00000344376 ZNF699Q32M78 642 aa17.19■□□□□ 0.34
ATG4B-201ENST00000344376 CFAP221Q4G0U5 840 aa17.19■□□□□ 0.34
ATG4B-201ENST00000344376 TDRD10Q5VZ19 366 aaKnown RBP17.19■□□□□ 0.34
ATG4B-201ENST00000344376 PHLDB3Q6NSJ2 640 aa17.19■□□□□ 0.34
ATG4B-201ENST00000344376 PRSS33Q8NF86 280 aa17.19■□□□□ 0.34
ATG4B-201ENST00000344376 PLEKHO2Q8TD55 490 aa17.19■□□□□ 0.34
ATG4B-201ENST00000344376 DEPDC1BQ8WUY9 529 aa17.19■□□□□ 0.34
ATG4B-201ENST00000344376 ZSWIM3Q96MP5 696 aa17.19■□□□□ 0.34
ATG4B-201ENST00000344376 TIGD1Q96MW7 591 aa17.19■□□□□ 0.34
ATG4B-201ENST00000344376 PKMYT1Q99640 499 aa17.19■□□□□ 0.34
ATG4B-201ENST00000344376 GTPBP4Q9BZE4 634 aaKnown RBP17.19■□□□□ 0.34
ATG4B-201ENST00000344376 TRPV4Q9HBA0 871 aa17.19■□□□□ 0.34
ATG4B-201ENST00000344376 ZNF334Q9HCZ1 680 aaPredicted RBP17.19■□□□□ 0.34
ATG4B-201ENST00000344376 NXF1Q9UBU9 619 aaKnown RBP17.19■□□□□ 0.34
ATG4B-201ENST00000344376 ZMYM5Q9UJ78 669 aa17.19■□□□□ 0.34
ATG4B-201ENST00000344376 NRG2O14511 850 aaPredicted RBP17.19■□□□□ 0.34
ATG4B-201ENST00000344376 GALR2O43603 387 aaPredicted RBP17.19■□□□□ 0.34
ATG4B-201ENST00000344376 KRT13P13646 458 aa17.19■□□□□ 0.34
ATG4B-201ENST00000344376 CYP2F1P24903 491 aa17.19■□□□□ 0.34
ATG4B-201ENST00000344376 GNL1P36915 607 aaPredicted RBP17.19■□□□□ 0.34
ATG4B-201ENST00000344376 PSMC1P62191 440 aaKnown RBP17.19■□□□□ 0.34
ATG4B-201ENST00000344376 PRKCQQ04759 706 aa17.19■□□□□ 0.34
ATG4B-201ENST00000344376 NCOA4Q13772 614 aa17.19■□□□□ 0.34
ATG4B-201ENST00000344376 MLF2Q15773 248 aaPredicted RBP17.19■□□□□ 0.34
ATG4B-201ENST00000344376 ZNF667Q5HYK9 610 aa17.19■□□□□ 0.34
ATG4B-201ENST00000344376 POTEHQ6S545 545 aa17.19■□□□□ 0.34
ATG4B-201ENST00000344376 INTS8Q75QN2 995 aaKnown RBP17.19■□□□□ 0.34
ATG4B-201ENST00000344376 GAREM2Q75VX8 874 aa17.19■□□□□ 0.34
ATG4B-201ENST00000344376 ENGASEQ8NFI3 743 aa17.19■□□□□ 0.34
ATG4B-201ENST00000344376 OR6B3Q8NGW1 331 aa17.19■□□□□ 0.34
ATG4B-201ENST00000344376 GSDMAQ96QA5 445 aa17.19■□□□□ 0.34
ATG4B-201ENST00000344376 TRMT61BQ9BVS5 477 aaKnown RBP17.19■□□□□ 0.34
ATG4B-201ENST00000344376 PLA2G2FQ9BZM2 168 aa17.19■□□□□ 0.34
ATG4B-201ENST00000344376 BRD9Q9H8M2 597 aa17.19■□□□□ 0.34
ATG4B-201ENST00000344376 MAGEC2Q9UBF1 373 aaPredicted RBP17.19■□□□□ 0.34
ATG4B-201ENST00000344376 KMT2EQ8IZD2 1858 aa17.19■□□□□ 0.34
ATG4B-201ENST00000344376 MUC6Q6W4X9 2439 aa17.18■□□□□ 0.34
ATG4B-201ENST00000344376 MYBPHLA2RUH7 354 aa17.18■□□□□ 0.34
ATG4B-201ENST00000344376 IKBKBO14920 756 aa17.18■□□□□ 0.34
ATG4B-201ENST00000344376 HCRTO43612 131 aa17.18■□□□□ 0.34
ATG4B-201ENST00000344376 KINO60870 393 aaKnown RBP17.18■□□□□ 0.34
ATG4B-201ENST00000344376 PDGFRBP09619 1106 aa17.18■□□□□ 0.34
ATG4B-201ENST00000344376 P4HA1P13674 534 aa17.18■□□□□ 0.34
ATG4B-201ENST00000344376 PSMC3P17980 439 aa17.18■□□□□ 0.34
ATG4B-201ENST00000344376 LMO2P25791 158 aa17.18■□□□□ 0.34
ATG4B-201ENST00000344376 EDRF1Q3B7T1 1238 aa17.18■□□□□ 0.34
ATG4B-201ENST00000344376 SLC44A4Q53GD3 710 aa17.18■□□□□ 0.34
ATG4B-201ENST00000344376 GPR158Q5T848 1215 aa17.18■□□□□ 0.34
ATG4B-201ENST00000344376 FAM171BQ6P995 826 aa17.18■□□□□ 0.34
ATG4B-201ENST00000344376 FAM186BQ8IYM0 893 aa17.18■□□□□ 0.34
ATG4B-201ENST00000344376 DNASE1L2Q92874 299 aa17.18■□□□□ 0.34
ATG4B-201ENST00000344376 SMARCE1Q969G3 411 aa17.18■□□□□ 0.34
ATG4B-201ENST00000344376 MYLPFQ96A32 169 aa17.18■□□□□ 0.34
ATG4B-201ENST00000344376 MRPL45Q9BRJ2 306 aaKnown RBP17.18■□□□□ 0.34
ATG4B-201ENST00000344376 XYLT2Q9H1B5 865 aa17.18■□□□□ 0.34
ATG4B-201ENST00000344376 VRTNQ9H8Y1 702 aa17.18■□□□□ 0.34
ATG4B-201ENST00000344376 UXTQ9UBK9 157 aaPredicted RBP17.18■□□□□ 0.34
ATG4B-201ENST00000344376 DPYSL4O14531 572 aa17.17■□□□□ 0.34
ATG4B-201ENST00000344376 C4BPAP04003 597 aaKnown RBP17.17■□□□□ 0.34
ATG4B-201ENST00000344376 PSMC2P35998 433 aaKnown RBP17.17■□□□□ 0.34
ATG4B-201ENST00000344376 VIPR2P41587 438 aa17.17■□□□□ 0.34
ATG4B-201ENST00000344376 MAGEA11P43364 429 aa17.17■□□□□ 0.34
ATG4B-201ENST00000344376 VAMP7P51809 220 aa17.17■□□□□ 0.34
ATG4B-201ENST00000344376 CYP27A1Q02318 531 aa17.17■□□□□ 0.34
ATG4B-201ENST00000344376 NHLH1Q02575 133 aa17.17■□□□□ 0.34
ATG4B-201ENST00000344376 ENPEPQ07075 957 aa17.17■□□□□ 0.34
ATG4B-201ENST00000344376 ADAM9Q13443 819 aa17.17■□□□□ 0.34
ATG4B-201ENST00000344376 GRM2Q14416 872 aa17.17■□□□□ 0.34
ATG4B-201ENST00000344376 VITQ6UXI7 678 aa17.17■□□□□ 0.34
ATG4B-201ENST00000344376 SCN4BQ8IWT1 228 aa17.17■□□□□ 0.34
ATG4B-201ENST00000344376 YAF2Q8IY57 180 aa17.17■□□□□ 0.34
ATG4B-201ENST00000344376 SMYD4Q8IYR2 804 aaPredicted RBP17.17■□□□□ 0.34
ATG4B-201ENST00000344376 IRF7Q92985 503 aa17.17■□□□□ 0.34
ATG4B-201ENST00000344376 IPO9Q96P70 1041 aaKnown RBP17.17■□□□□ 0.34
ATG4B-201ENST00000344376 TSG101Q99816 390 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms