RNA–Protein interactions for RNA: ENST00000342203.7

SSX2IP-201, Transcript of SSX family member 2 interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX2IP, Length 5,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-201ENST00000342203 ZNF317Q96PQ6 595 aaPredicted RBP13.08□□□□□ -0.31
SSX2IP-201ENST00000342203 EBF2Q9HAK2 575 aa13.08□□□□□ -0.31
SSX2IP-201ENST00000342203 TMEM8AQ9HCN3 771 aa13.08□□□□□ -0.31
SSX2IP-201ENST00000342203 SAR1AQ9NR31 198 aa13.08□□□□□ -0.31
SSX2IP-201ENST00000342203 STRIP2Q9ULQ0 834 aa13.08□□□□□ -0.31
SSX2IP-201ENST00000342203 USP20Q9Y2K6 914 aa13.08□□□□□ -0.31
SSX2IP-201ENST00000342203 PROCP04070 461 aa13.08□□□□□ -0.32
SSX2IP-201ENST00000342203 ADARP55265 1226 aaKnown RBP13.08□□□□□ -0.32
SSX2IP-201ENST00000342203 LLGL2Q6P1M3 1020 aa13.08□□□□□ -0.32
SSX2IP-201ENST00000342203 MFSD7Q6UXD7 560 aa13.08□□□□□ -0.32
SSX2IP-201ENST00000342203 RIOX1Q9H6W3 641 aa13.08□□□□□ -0.32
SSX2IP-201ENST00000342203 RAVER2Q9HCJ3 691 aaKnown RBP13.08□□□□□ -0.32
SSX2IP-201ENST00000342203 ASNSD1Q9NWL6 643 aa13.08□□□□□ -0.32
SSX2IP-201ENST00000342203 ZNF212Q9UDV6 495 aa13.08□□□□□ -0.32
SSX2IP-201ENST00000342203 HERC5Q9UII4 1024 aaKnown RBP13.08□□□□□ -0.32
SSX2IP-201ENST00000342203 M0QYV0 167 aa13.08□□□□□ -0.32
SSX2IP-201ENST00000342203 PAEPP09466 180 aa13.08□□□□□ -0.32
SSX2IP-201ENST00000342203 GTF2H1P32780 548 aa13.08□□□□□ -0.32
SSX2IP-201ENST00000342203 CDK16Q00536 496 aa13.08□□□□□ -0.32
SSX2IP-201ENST00000342203 HEATR6Q6AI08 1181 aaKnown RBP13.08□□□□□ -0.32
SSX2IP-201ENST00000342203 IL31Q6EBC2 164 aa13.08□□□□□ -0.32
SSX2IP-201ENST00000342203 DSTYKQ6XUX3 929 aa13.08□□□□□ -0.32
SSX2IP-201ENST00000342203 ETNPPLQ8TBG4 499 aa13.08□□□□□ -0.32
SSX2IP-201ENST00000342203 FAM96AQ9H5X1 160 aa13.08□□□□□ -0.32
SSX2IP-201ENST00000342203 ZMYND8Q9ULU4 1186 aaPredicted RBP13.08□□□□□ -0.32
SSX2IP-201ENST00000342203 PROSCO94903 275 aa13.08□□□□□ -0.32
SSX2IP-201ENST00000342203 TPBGLP0DKB5 382 aa13.08□□□□□ -0.32
SSX2IP-201ENST00000342203 MMP14P50281 582 aa13.08□□□□□ -0.32
SSX2IP-201ENST00000342203 FAAP100Q0VG06 881 aa13.08□□□□□ -0.32
SSX2IP-201ENST00000342203 MTFR1LQ9H019 292 aa13.08□□□□□ -0.32
SSX2IP-201ENST00000342203 SLC24A2Q9UI40 661 aa13.08□□□□□ -0.32
SSX2IP-201ENST00000342203 EDF1O60869 148 aaKnown RBP13.08□□□□□ -0.32
SSX2IP-201ENST00000342203 CRKP46108 304 aa13.08□□□□□ -0.32
SSX2IP-201ENST00000342203 PDK4Q16654 411 aa13.08□□□□□ -0.32
SSX2IP-201ENST00000342203 RIPOR1Q6ZS17 1223 aa13.08□□□□□ -0.32
SSX2IP-201ENST00000342203 USP13Q92995 863 aaPredicted RBP13.08□□□□□ -0.32
SSX2IP-201ENST00000342203 LRMDAQ9H2I8 198 aa13.08□□□□□ -0.32
SSX2IP-201ENST00000342203 FNDC3AQ9Y2H6 1198 aaKnown RBP13.08□□□□□ -0.32
SSX2IP-201ENST00000342203 DNALI1O14645 258 aaPredicted RBP13.07□□□□□ -0.32
SSX2IP-201ENST00000342203 ZMPSTE24O75844 475 aa13.07□□□□□ -0.32
SSX2IP-201ENST00000342203 BBOX1O75936 387 aa13.07□□□□□ -0.32
SSX2IP-201ENST00000342203 RAG1P15918 1043 aa13.07□□□□□ -0.32
SSX2IP-201ENST00000342203 ELK3P41970 407 aa13.07□□□□□ -0.32
SSX2IP-201ENST00000342203 PPP3CAQ08209 521 aa13.07□□□□□ -0.32
SSX2IP-201ENST00000342203 ASTE1Q2TB18 679 aaPredicted RBP13.07□□□□□ -0.32
SSX2IP-201ENST00000342203 TTC39BQ5VTQ0 682 aaPredicted RBP13.07□□□□□ -0.32
SSX2IP-201ENST00000342203 LARGE2Q8N3Y3 721 aa13.07□□□□□ -0.32
SSX2IP-201ENST00000342203 RASGEF1CQ8N431 466 aa13.07□□□□□ -0.32
SSX2IP-201ENST00000342203 NDUFA13Q9P0J0 144 aa13.07□□□□□ -0.32
SSX2IP-201ENST00000342203 NUB1Q9Y5A7 615 aa13.07□□□□□ -0.32
SSX2IP-201ENST00000342203 EML1O00423 815 aa13.07□□□□□ -0.32
SSX2IP-201ENST00000342203 FKBP6O75344 327 aa13.07□□□□□ -0.32
SSX2IP-201ENST00000342203 PYGLP06737 847 aa13.07□□□□□ -0.32
SSX2IP-201ENST00000342203 EFTUD2Q15029 972 aaKnown RBP eCLIP13.07□□□□□ -0.329e-7■■□□□ 13
SSX2IP-201ENST00000342203 GPAT2Q6NUI2 795 aa13.07□□□□□ -0.32
SSX2IP-201ENST00000342203 ZNF786Q8N393 782 aa13.07□□□□□ -0.32
SSX2IP-201ENST00000342203 CYGBQ8WWM9 190 aa13.07□□□□□ -0.32
SSX2IP-201ENST00000342203 FAXDC2Q96IV6 333 aa13.07□□□□□ -0.32
SSX2IP-201ENST00000342203 FAM192AQ9GZU8 254 aa13.07□□□□□ -0.32
SSX2IP-201ENST00000342203 UNC45AQ9H3U1 944 aa13.07□□□□□ -0.32
SSX2IP-201ENST00000342203 PPCSQ9HAB8 311 aa13.07□□□□□ -0.32
SSX2IP-201ENST00000342203 BTBD7Q9P203 1132 aa13.07□□□□□ -0.32
SSX2IP-201ENST00000342203 SOX13Q9UN79 622 aa13.07□□□□□ -0.32
SSX2IP-201ENST00000342203 DIP2CQ9Y2E4 1556 aa13.07□□□□□ -0.32
SSX2IP-201ENST00000342203 ITSN1Q15811 1721 aa13.07□□□□□ -0.32
SSX2IP-201ENST00000342203 PPEF1O14829 653 aaPredicted RBP13.07□□□□□ -0.32
SSX2IP-201ENST00000342203 VCAM1P19320 739 aa13.07□□□□□ -0.32
SSX2IP-201ENST00000342203 SLC1A5Q15758 541 aa13.07□□□□□ -0.32
SSX2IP-201ENST00000342203 PARP6Q2NL67 630 aa13.07□□□□□ -0.32
SSX2IP-201ENST00000342203 RFWD3Q6PCD5 774 aa13.07□□□□□ -0.32
SSX2IP-201ENST00000342203 SV2AQ7L0J3 742 aa13.07□□□□□ -0.32
SSX2IP-201ENST00000342203 KCTD10Q9H3F6 313 aa13.07□□□□□ -0.32
SSX2IP-201ENST00000342203 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.07□□□□□ -0.32
SSX2IP-201ENST00000342203 DDX3YO15523 660 aaKnown RBP13.07□□□□□ -0.32
SSX2IP-201ENST00000342203 ACTR2P61160 394 aa13.07□□□□□ -0.32
SSX2IP-201ENST00000342203 MARK2Q7KZI7 788 aaKnown RBP13.07□□□□□ -0.32
SSX2IP-201ENST00000342203 ZNF572Q7Z3I7 529 aaPredicted RBP13.07□□□□□ -0.32
SSX2IP-201ENST00000342203 CLNKQ7Z7G1 428 aa13.07□□□□□ -0.32
SSX2IP-201ENST00000342203 CPNE8Q86YQ8 564 aa13.07□□□□□ -0.32
SSX2IP-201ENST00000342203 RFWD2Q8NHY2 731 aa13.07□□□□□ -0.32
SSX2IP-201ENST00000342203 SHISA4Q96DD7 197 aa13.07□□□□□ -0.32
SSX2IP-201ENST00000342203 CHKBQ9Y259 395 aa13.07□□□□□ -0.32
SSX2IP-201ENST00000342203 RPTORQ8N122 1335 aa13.07□□□□□ -0.32
SSX2IP-201ENST00000342203 TBXAS1P24557 533 aaPredicted RBP13.07□□□□□ -0.32
SSX2IP-201ENST00000342203 RGS7P49802 495 aa13.07□□□□□ -0.32
SSX2IP-201ENST00000342203 FASTKD1Q53R41 847 aaKnown RBP13.07□□□□□ -0.32
SSX2IP-201ENST00000342203 BRINP3Q76B58 766 aa13.07□□□□□ -0.32
SSX2IP-201ENST00000342203 LRP10Q7Z4F1 713 aa13.07□□□□□ -0.32
SSX2IP-201ENST00000342203 CYP4X1Q8N118 509 aa13.07□□□□□ -0.32
SSX2IP-201ENST00000342203 CATSPER1Q8NEC5 780 aa13.07□□□□□ -0.32
SSX2IP-201ENST00000342203 EPS8L1Q8TE68 723 aa13.07□□□□□ -0.32
SSX2IP-201ENST00000342203 POLR3FQ9H1D9 316 aaPredicted RBP13.07□□□□□ -0.32
SSX2IP-201ENST00000342203 IL1RL2Q9HB29 575 aa13.07□□□□□ -0.32
SSX2IP-201ENST00000342203 ARHGEF3Q9NR81 526 aa13.07□□□□□ -0.32
SSX2IP-201ENST00000342203 PRR12Q9ULL5 1215 aa13.07□□□□□ -0.32
SSX2IP-201ENST00000342203 SLURP2P0DP57 97 aa13.06□□□□□ -0.32
SSX2IP-201ENST00000342203 PLOD1Q02809 727 aaPredicted RBP13.06□□□□□ -0.32
SSX2IP-201ENST00000342203 NCOA4Q13772 614 aa13.06□□□□□ -0.32
SSX2IP-201ENST00000342203 WDR72Q3MJ13 1102 aa13.06□□□□□ -0.32
SSX2IP-201ENST00000342203 CC2D2BQ6DHV5 1058 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms