RNA–Protein interactions for RNA: ENST00000341697.7

SEMA6C-201, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 5,262 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-201ENST00000341697 ART3Q13508 389 aa20.48■□□□□ 0.87
SEMA6C-201ENST00000341697 C4orf22Q6V702 233 aa20.48■□□□□ 0.87
SEMA6C-201ENST00000341697 MTMR14Q8NCE2 650 aa20.48■□□□□ 0.87
SEMA6C-201ENST00000341697 ULK4Q96C45 1275 aa20.48■□□□□ 0.87
SEMA6C-201ENST00000341697 IL17RAQ96F46 866 aa20.48■□□□□ 0.87
SEMA6C-201ENST00000341697 TRIM54Q9BYV2 358 aa20.48■□□□□ 0.87
SEMA6C-201ENST00000341697 ZC3H7BQ9UGR2 993 aaKnown RBP20.48■□□□□ 0.87
SEMA6C-201ENST00000341697 TFR2Q9UP52 801 aa20.48■□□□□ 0.87
SEMA6C-201ENST00000341697 KLHL29Q96CT2 875 aa20.48■□□□□ 0.87
SEMA6C-201ENST00000341697 SLC13A1Q9BZW2 595 aa20.48■□□□□ 0.87
SEMA6C-201ENST00000341697 TMEM39AQ9NV64 488 aa20.48■□□□□ 0.87
SEMA6C-201ENST00000341697 PDCLQ13371 301 aa20.48■□□□□ 0.87
SEMA6C-201ENST00000341697 NAA30Q147X3 362 aaPredicted RBP20.48■□□□□ 0.87
SEMA6C-201ENST00000341697 SLC47A2Q86VL8 602 aa20.48■□□□□ 0.87
SEMA6C-201ENST00000341697 EGFL8Q99944 293 aa20.48■□□□□ 0.87
SEMA6C-201ENST00000341697 FAM118BQ9BPY3 351 aa20.48■□□□□ 0.87
SEMA6C-201ENST00000341697 TMEM134Q9H6X4 195 aa20.48■□□□□ 0.87
SEMA6C-201ENST00000341697 ENTPD7Q9NQZ7 604 aa20.48■□□□□ 0.87
SEMA6C-201ENST00000341697 BARX2Q9UMQ3 279 aaPredicted RBP20.48■□□□□ 0.87
SEMA6C-201ENST00000341697 ROBO3Q96MS0 1386 aa20.48■□□□□ 0.87
SEMA6C-201ENST00000341697 ROBO1Q9Y6N7 1651 aa20.48■□□□□ 0.87
SEMA6C-201ENST00000341697 A0A0G2JND7 137 aa20.48■□□□□ 0.87
SEMA6C-201ENST00000341697 NAA25Q14CX7 972 aa20.48■□□□□ 0.87
SEMA6C-201ENST00000341697 MUM1Q2TAK8 710 aa20.48■□□□□ 0.87
SEMA6C-201ENST00000341697 TRMT10CQ7L0Y3 403 aaKnown RBP20.48■□□□□ 0.87
SEMA6C-201ENST00000341697 TATDN2Q93075 761 aa20.48■□□□□ 0.87
SEMA6C-201ENST00000341697 APBA2Q99767 749 aa20.48■□□□□ 0.87
SEMA6C-201ENST00000341697 GTSE1Q9NYZ3 720 aa20.48■□□□□ 0.87
SEMA6C-201ENST00000341697 TBC1D1Q86TI0 1168 aaPredicted RBP20.47■□□□□ 0.87
SEMA6C-201ENST00000341697 MRPS31Q92665 395 aaKnown RBP20.47■□□□□ 0.87
SEMA6C-201ENST00000341697 ELAC2Q9BQ52 826 aaKnown RBP20.47■□□□□ 0.87
SEMA6C-201ENST00000341697 SPATA31C2B4DYI2 1134 aa20.47■□□□□ 0.87
SEMA6C-201ENST00000341697 C2CD6Q53TS8 623 aa20.47■□□□□ 0.87
SEMA6C-201ENST00000341697 MDH1BQ5I0G3 518 aa20.47■□□□□ 0.87
SEMA6C-201ENST00000341697 IL31RAQ8NI17 732 aa20.47■□□□□ 0.87
SEMA6C-201ENST00000341697 DCUN1D1Q96GG9 259 aa20.47■□□□□ 0.87
SEMA6C-201ENST00000341697 TACO1Q9BSH4 297 aaKnown RBP20.47■□□□□ 0.87
SEMA6C-201ENST00000341697 SMARCAL1Q9NZC9 954 aa20.47■□□□□ 0.87
SEMA6C-201ENST00000341697 BST2Q10589 180 aaKnown RBP20.47■□□□□ 0.87
SEMA6C-201ENST00000341697 SLC35C1Q96A29 364 aa20.47■□□□□ 0.87
SEMA6C-201ENST00000341697 SUN2Q9UH99 717 aa20.47■□□□□ 0.87
SEMA6C-201ENST00000341697 CHD2O14647 1828 aaKnown RBP20.47■□□□□ 0.87
SEMA6C-201ENST00000341697 TBKBP1A7MCY6 615 aa20.47■□□□□ 0.87
SEMA6C-201ENST00000341697 FAM47EQ6ZV65 393 aa20.47■□□□□ 0.87
SEMA6C-201ENST00000341697 SH3RF1Q7Z6J0 888 aa20.47■□□□□ 0.87
SEMA6C-201ENST00000341697 SLC13A5Q86YT5 568 aaPredicted RBP20.47■□□□□ 0.87
SEMA6C-201ENST00000341697 ATP6V1G3Q96LB4 118 aa20.47■□□□□ 0.87
SEMA6C-201ENST00000341697 ZBTB18Q99592 522 aa20.47■□□□□ 0.87
SEMA6C-201ENST00000341697 DUSP9Q99956 384 aaKnown RBP20.47■□□□□ 0.87
SEMA6C-201ENST00000341697 DDX43Q9NXZ2 648 aaKnown RBP20.47■□□□□ 0.87
SEMA6C-201ENST00000341697 CASQ2O14958 399 aaPredicted RBP20.47■□□□□ 0.87
SEMA6C-201ENST00000341697 ESRRAP11474 423 aaPredicted RBP20.47■□□□□ 0.87
SEMA6C-201ENST00000341697 FAM133BQ5BKY9 247 aaKnown RBP20.47■□□□□ 0.87
SEMA6C-201ENST00000341697 PRAMEF19Q5SWL8 479 aa20.47■□□□□ 0.87
SEMA6C-201ENST00000341697 DPF3Q92784 378 aa20.47■□□□□ 0.87
SEMA6C-201ENST00000341697 SENP1Q9P0U3 644 aa20.47■□□□□ 0.87
SEMA6C-201ENST00000341697 APOBEC2Q9Y235 224 aaKnown RBP20.47■□□□□ 0.87
SEMA6C-201ENST00000341697 PCDHB12Q9Y5F1 795 aa20.47■□□□□ 0.87
SEMA6C-201ENST00000341697 MAP3K7CLP57077 242 aa20.46■□□□□ 0.87
SEMA6C-201ENST00000341697 OVOS1Q6IE37 1185 aa20.46■□□□□ 0.87
SEMA6C-201ENST00000341697 ZNF571Q7Z3V5 609 aaPredicted RBP20.46■□□□□ 0.87
SEMA6C-201ENST00000341697 DRC3Q9H069 523 aa20.46■□□□□ 0.87
SEMA6C-201ENST00000341697 USP20Q9Y2K6 914 aa20.46■□□□□ 0.87
SEMA6C-201ENST00000341697 RGPD8O14715 1765 aaPredicted RBP20.46■□□□□ 0.87
SEMA6C-201ENST00000341697 LACTBL1A8MY62 500 aa20.46■□□□□ 0.87
SEMA6C-201ENST00000341697 DNAJC6O75061 913 aa20.46■□□□□ 0.87
SEMA6C-201ENST00000341697 UGP2Q16851 508 aa20.46■□□□□ 0.87
SEMA6C-201ENST00000341697 CXCL17Q6UXB2 119 aa20.46■□□□□ 0.87
SEMA6C-201ENST00000341697 PLPPR4Q7Z2D5 763 aa20.46■□□□□ 0.87
SEMA6C-201ENST00000341697 BTBD6Q96KE9 485 aa20.46■□□□□ 0.87
SEMA6C-201ENST00000341697 SYT15Q9BQS2 421 aa20.46■□□□□ 0.87
SEMA6C-201ENST00000341697 SLIT2O94813 1529 aa20.46■□□□□ 0.87
SEMA6C-201ENST00000341697 SETSIPP0DME0 302 aa20.46■□□□□ 0.87
SEMA6C-201ENST00000341697 RRM1P23921 792 aa20.46■□□□□ 0.87
SEMA6C-201ENST00000341697 GCNT1Q02742 428 aa20.46■□□□□ 0.87
SEMA6C-201ENST00000341697 MIB1Q86YT6 1006 aa20.46■□□□□ 0.87
SEMA6C-201ENST00000341697 RNF135Q8IUD6 432 aa20.46■□□□□ 0.87
SEMA6C-201ENST00000341697 ABRAQ8N0Z2 381 aa20.46■□□□□ 0.87
SEMA6C-201ENST00000341697 ZBTB45Q96K62 511 aaPredicted RBP20.46■□□□□ 0.87
SEMA6C-201ENST00000341697 SNHG28P0DPA3 235 aa20.46■□□□□ 0.87
SEMA6C-201ENST00000341697 ITGB5P18084 799 aa20.46■□□□□ 0.87
SEMA6C-201ENST00000341697 KIF19Q2TAC6 998 aa20.46■□□□□ 0.87
SEMA6C-201ENST00000341697 FASTKD1Q53R41 847 aaKnown RBP20.46■□□□□ 0.87
SEMA6C-201ENST00000341697 NUDCD3Q8IVD9 361 aa20.46■□□□□ 0.87
SEMA6C-201ENST00000341697 ACSF2Q96CM8 615 aaPredicted RBP20.46■□□□□ 0.87
SEMA6C-201ENST00000341697 RPRD1AQ96P16 312 aaPredicted RBP20.46■□□□□ 0.87
SEMA6C-201ENST00000341697 TRPM5Q9NZQ8 1165 aa20.46■□□□□ 0.87
SEMA6C-201ENST00000341697 RAD51CO43502 376 aa20.45■□□□□ 0.86
SEMA6C-201ENST00000341697 DCTN3O75935 186 aa20.45■□□□□ 0.86
SEMA6C-201ENST00000341697 ATXN8OSP0DMR3 200 aa20.45■□□□□ 0.86
SEMA6C-201ENST00000341697 ACAD11Q709F0 780 aa20.45■□□□□ 0.86
SEMA6C-201ENST00000341697 SLC20A1Q8WUM9 679 aa20.45■□□□□ 0.86
SEMA6C-201ENST00000341697 KCNJ1P48048 391 aa20.45■□□□□ 0.86
SEMA6C-201ENST00000341697 PDCD7Q8N8D1 485 aaKnown RBP20.45■□□□□ 0.86
SEMA6C-201ENST00000341697 ATXN7L3BQ96GX2 97 aa20.45■□□□□ 0.86
SEMA6C-201ENST00000341697 PDK2Q15119 407 aa20.45■□□□□ 0.86
SEMA6C-201ENST00000341697 PCSK7Q16549 785 aa20.45■□□□□ 0.86
SEMA6C-201ENST00000341697 CLEC16AQ2KHT3 1053 aa20.45■□□□□ 0.86
SEMA6C-201ENST00000341697 MLXIPLQ9NP71 852 aa20.45■□□□□ 0.86
SEMA6C-201ENST00000341697 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms