RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 C1orf131Q8NDD1 294 aaKnown RBP15.96■□□□□ 0.15
BRAT1-201ENST00000340611 DHX38Q92620 1227 aaKnown RBP15.96■□□□□ 0.15
BRAT1-201ENST00000340611 CELF4Q9BZC1 486 aaKnown RBP15.96■□□□□ 0.15
BRAT1-201ENST00000340611 PPP1R12CQ9BZL4 782 aa15.96■□□□□ 0.15
BRAT1-201ENST00000340611 PREBQ9HCU5 417 aa15.96■□□□□ 0.15
BRAT1-201ENST00000340611 DLGAP2Q9P1A6 1054 aa15.96■□□□□ 0.15
BRAT1-201ENST00000340611 SCN10AQ9Y5Y9 1956 aa15.96■□□□□ 0.14
BRAT1-201ENST00000340611 CREB3O43889 395 aa15.95■□□□□ 0.14
BRAT1-201ENST00000340611 TSPAN1O60635 241 aa15.95■□□□□ 0.14
BRAT1-201ENST00000340611 DRAP1Q14919 205 aaPredicted RBP15.95■□□□□ 0.14
BRAT1-201ENST00000340611 EPC2Q52LR7 807 aa15.95■□□□□ 0.14
BRAT1-201ENST00000340611 TDRD10Q5VZ19 366 aaKnown RBP15.95■□□□□ 0.14
BRAT1-201ENST00000340611 ZPBP2Q6X784 338 aa15.95■□□□□ 0.14
BRAT1-201ENST00000340611 LRRC45Q96CN5 670 aa15.95■□□□□ 0.14
BRAT1-201ENST00000340611 PDZD7Q9H5P4 517 aa15.95■□□□□ 0.14
BRAT1-201ENST00000340611 PTPRHQ9HD43 1115 aa15.95■□□□□ 0.14
BRAT1-201ENST00000340611 TMEM59LQ9UK28 342 aa15.95■□□□□ 0.14
BRAT1-201ENST00000340611 MBLAC1A4D2B0 266 aaPredicted RBP15.95■□□□□ 0.14
BRAT1-201ENST00000340611 RRN3P2A6NIE6 340 aa15.95■□□□□ 0.14
BRAT1-201ENST00000340611 ASAP2O43150 1006 aa15.95■□□□□ 0.14
BRAT1-201ENST00000340611 SNRPFP62306 86 aaKnown RBP15.95■□□□□ 0.14
BRAT1-201ENST00000340611 MYBPC3Q14896 1274 aa15.95■□□□□ 0.14
BRAT1-201ENST00000340611 SLFN12LQ6IEE8 588 aa15.95■□□□□ 0.14
BRAT1-201ENST00000340611 MPZL3Q6UWV2 235 aa15.95■□□□□ 0.14
BRAT1-201ENST00000340611 TSHZ1Q6ZSZ6 1077 aa15.95■□□□□ 0.14
BRAT1-201ENST00000340611 MTMR12Q9C0I1 747 aa15.95■□□□□ 0.14
BRAT1-201ENST00000340611 SPC25Q9HBM1 224 aa15.95■□□□□ 0.14
BRAT1-201ENST00000340611 LNPEPQ9UIQ6 1025 aa15.95■□□□□ 0.14
BRAT1-201ENST00000340611 Q9Y3F1 56 aa15.95■□□□□ 0.14
BRAT1-201ENST00000340611 CNTNAP2Q9UHC6 1331 aa15.95■□□□□ 0.14
BRAT1-201ENST00000340611 LIN7AO14910 233 aaPredicted RBP15.95■□□□□ 0.14
BRAT1-201ENST00000340611 CCND1P24385 295 aa15.95■□□□□ 0.14
BRAT1-201ENST00000340611 ASIC2Q16515 512 aa15.95■□□□□ 0.14
BRAT1-201ENST00000340611 KRT39Q6A163 491 aa15.95■□□□□ 0.14
BRAT1-201ENST00000340611 ELAC2Q9BQ52 826 aaKnown RBP15.95■□□□□ 0.14
BRAT1-201ENST00000340611 MTG1Q9BT17 334 aaPredicted RBP15.95■□□□□ 0.14
BRAT1-201ENST00000340611 APOL6Q9BWW8 343 aa15.95■□□□□ 0.14
BRAT1-201ENST00000340611 EIF2AQ9BY44 585 aaKnown RBP15.95■□□□□ 0.14
BRAT1-201ENST00000340611 GPR88Q9GZN0 384 aa15.95■□□□□ 0.14
BRAT1-201ENST00000340611 APEX2Q9UBZ4 518 aa15.95■□□□□ 0.14
BRAT1-201ENST00000340611 ZMYND8Q9ULU4 1186 aaPredicted RBP15.95■□□□□ 0.14
BRAT1-201ENST00000340611 TRIM33Q9UPN9 1127 aa15.95■□□□□ 0.14
BRAT1-201ENST00000340611 NOC2LQ9Y3T9 749 aaKnown RBP15.95■□□□□ 0.14
BRAT1-201ENST00000340611 FOXN3O00409 490 aaPredicted RBP15.94■□□□□ 0.14
BRAT1-201ENST00000340611 KRIT1O00522 736 aa15.94■□□□□ 0.14
BRAT1-201ENST00000340611 TTI1O43156 1089 aa15.94■□□□□ 0.14
BRAT1-201ENST00000340611 NQO1P15559 274 aaKnown RBP15.94■□□□□ 0.14
BRAT1-201ENST00000340611 DRD4P21917 467 aa15.94■□□□□ 0.14
BRAT1-201ENST00000340611 HOXD10P28358 340 aa15.94■□□□□ 0.14
BRAT1-201ENST00000340611 CUL1Q13616 776 aa15.94■□□□□ 0.14
BRAT1-201ENST00000340611 CATSPER4Q7RTX7 472 aa15.94■□□□□ 0.14
BRAT1-201ENST00000340611 EDEM3Q9BZQ6 932 aa15.94■□□□□ 0.14
BRAT1-201ENST00000340611 TRMT13Q9NUP7 481 aaKnown RBP15.94■□□□□ 0.14
BRAT1-201ENST00000340611 ABCF3Q9NUQ8 709 aa15.94■□□□□ 0.14
BRAT1-201ENST00000340611 GALNT8Q9NY28 637 aa15.94■□□□□ 0.14
BRAT1-201ENST00000340611 UMODL1Q5DID0 1318 aa15.94■□□□□ 0.14
BRAT1-201ENST00000340611 OGTO15294 1046 aa15.94■□□□□ 0.14
BRAT1-201ENST00000340611 ZNF189O75820 626 aaPredicted RBP15.94■□□□□ 0.14
BRAT1-201ENST00000340611 VNN1O95497 513 aa15.94■□□□□ 0.14
BRAT1-201ENST00000340611 CST3P01034 146 aaPredicted RBP15.94■□□□□ 0.14
BRAT1-201ENST00000340611 PROZP22891 400 aa15.94■□□□□ 0.14
BRAT1-201ENST00000340611 TFAMQ00059 246 aaKnown RBP15.94■□□□□ 0.14
BRAT1-201ENST00000340611 PTK2Q05397 1052 aa15.94■□□□□ 0.14
BRAT1-201ENST00000340611 MCL1Q07820 350 aa15.94■□□□□ 0.14
BRAT1-201ENST00000340611 DHX9Q08211 1270 aaKnown RBP15.94■□□□□ 0.14
BRAT1-201ENST00000340611 REM2Q8IYK8 340 aaPredicted RBP15.94■□□□□ 0.14
BRAT1-201ENST00000340611 ATL2Q8NHH9 583 aa15.94■□□□□ 0.14
BRAT1-201ENST00000340611 PRMT7Q9NVM4 692 aaPredicted RBP15.94■□□□□ 0.14
BRAT1-201ENST00000340611 KRT16P08779 473 aa15.93■□□□□ 0.14
BRAT1-201ENST00000340611 GHRP10912 638 aa15.93■□□□□ 0.14
BRAT1-201ENST00000340611 RIPK1Q13546 671 aa15.93■□□□□ 0.14
BRAT1-201ENST00000340611 PSMD6Q15008 389 aa15.93■□□□□ 0.14
BRAT1-201ENST00000340611 IRF2BP2Q7Z5L9 587 aa15.93■□□□□ 0.14
BRAT1-201ENST00000340611 ANKS4BQ8N8V4 417 aa15.93■□□□□ 0.14
BRAT1-201ENST00000340611 MAIP1Q8WWC4 291 aa15.93■□□□□ 0.14
BRAT1-201ENST00000340611 KREMEN1Q96MU8 473 aa15.93■□□□□ 0.14
BRAT1-201ENST00000340611 CFHR5Q9BXR6 569 aa15.93■□□□□ 0.14
BRAT1-201ENST00000340611 TMEM8AQ9HCN3 771 aa15.93■□□□□ 0.14
BRAT1-201ENST00000340611 THSD7BQ9C0I4 1608 aa15.93■□□□□ 0.14
BRAT1-201ENST00000340611 GTPBP10A4D1E9 387 aaKnown RBP15.93■□□□□ 0.14
BRAT1-201ENST00000340611 HOXA11P31270 313 aaPredicted RBP15.93■□□□□ 0.14
BRAT1-201ENST00000340611 GRK4P32298 578 aa15.93■□□□□ 0.14
BRAT1-201ENST00000340611 IRF5Q13568 498 aa15.93■□□□□ 0.14
BRAT1-201ENST00000340611 MTFR1Q15390 333 aa15.93■□□□□ 0.14
BRAT1-201ENST00000340611 MAP3K21Q5TCX8 1036 aa15.93■□□□□ 0.14
BRAT1-201ENST00000340611 TMEM174Q8WUU8 243 aa15.93■□□□□ 0.14
BRAT1-201ENST00000340611 RAB20Q9NX57 234 aa15.93■□□□□ 0.14
BRAT1-201ENST00000340611 CPSF3Q9UKF6 684 aaKnown RBP15.93■□□□□ 0.14
BRAT1-201ENST00000340611 ANK1P16157 1881 aa15.93■□□□□ 0.14
BRAT1-201ENST00000340611 SMIM35A0A1B0GVV1 85 aa15.92■□□□□ 0.14
BRAT1-201ENST00000340611 SMIM23A6NLE4 172 aa15.92■□□□□ 0.14
BRAT1-201ENST00000340611 SRRM3A6NNA2 597 aaPredicted RBP15.92■□□□□ 0.14
BRAT1-201ENST00000340611 PGRMC1O00264 195 aaKnown RBP15.92■□□□□ 0.14
BRAT1-201ENST00000340611 NPTXRO95502 500 aa15.92■□□□□ 0.14
BRAT1-201ENST00000340611 STAG3L1P0CL83 205 aa15.92■□□□□ 0.14
BRAT1-201ENST00000340611 SSTR3P32745 418 aaPredicted RBP15.92■□□□□ 0.14
BRAT1-201ENST00000340611 ZNF268Q14587 947 aaPredicted RBP15.92■□□□□ 0.14
BRAT1-201ENST00000340611 ZNF571Q7Z3V5 609 aaPredicted RBP15.92■□□□□ 0.14
BRAT1-201ENST00000340611 PHC3Q8NDX5 983 aa15.92■□□□□ 0.14
BRAT1-201ENST00000340611 FBXL13Q8NEE6 735 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms