RNA–Protein interactions for RNA: ENST00000334527.11

NDEL1-201, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDEL1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-201ENST00000334527 WDR4P57081 412 aaKnown RBP24.62■■□□□ 1.53
NDEL1-201ENST00000334527 CCDC142Q17RM4 750 aa24.62■■□□□ 1.53
NDEL1-201ENST00000334527 PTPN20Q4JDL3 420 aa24.62■■□□□ 1.53
NDEL1-201ENST00000334527 CENPUQ71F23 418 aa24.62■■□□□ 1.53
NDEL1-201ENST00000334527 POLNQ7Z5Q5 900 aa24.62■■□□□ 1.53
NDEL1-201ENST00000334527 GBP7Q8N8V2 638 aaPredicted RBP24.62■■□□□ 1.53
NDEL1-201ENST00000334527 ZNF668Q96K58 619 aaPredicted RBP24.62■■□□□ 1.53
NDEL1-201ENST00000334527 SAE1Q9UBE0 346 aaPredicted RBP24.62■■□□□ 1.53
NDEL1-201ENST00000334527 TJP2Q9UDY2 1190 aa24.62■■□□□ 1.53
NDEL1-201ENST00000334527 PPME1Q9Y570 386 aa24.62■■□□□ 1.53
NDEL1-201ENST00000334527 NCALDP61601 193 aa24.61■■□□□ 1.53
NDEL1-201ENST00000334527 MTFR1Q15390 333 aa24.61■■□□□ 1.53
NDEL1-201ENST00000334527 POTEAQ6S8J7 498 aa24.61■■□□□ 1.53
NDEL1-201ENST00000334527 MPZL3Q6UWV2 235 aa24.61■■□□□ 1.53
NDEL1-201ENST00000334527 RHPN2Q8IUC4 686 aa24.61■■□□□ 1.53
NDEL1-201ENST00000334527 SLC35B2Q8TB61 432 aa24.61■■□□□ 1.53
NDEL1-201ENST00000334527 ANKRD36BP1Q96IX9 119 aa24.61■■□□□ 1.53
NDEL1-201ENST00000334527 UBN1Q9NPG3 1134 aa24.61■■□□□ 1.53
NDEL1-201ENST00000334527 ALOX15BO15296 676 aa24.61■■□□□ 1.53
NDEL1-201ENST00000334527 KRT3P12035 628 aa24.61■■□□□ 1.53
NDEL1-201ENST00000334527 KRT15P19012 456 aa24.61■■□□□ 1.53
NDEL1-201ENST00000334527 POLR2BP30876 1174 aaKnown RBP24.61■■□□□ 1.53
NDEL1-201ENST00000334527 RAP1GAPP47736 663 aa24.61■■□□□ 1.53
NDEL1-201ENST00000334527 YWHAEP62258 255 aaKnown RBP24.61■■□□□ 1.53
NDEL1-201ENST00000334527 PDIA2Q13087 525 aaKnown RBP24.61■■□□□ 1.53
NDEL1-201ENST00000334527 PKN2Q16513 984 aaKnown RBP24.61■■□□□ 1.53
NDEL1-201ENST00000334527 JOSD2Q8TAC2 188 aa24.61■■□□□ 1.53
NDEL1-201ENST00000334527 PRCCQ92733 491 aaPredicted RBP24.61■■□□□ 1.53
NDEL1-201ENST00000334527 C2orf40Q9H1Z8 148 aa24.61■■□□□ 1.53
NDEL1-201ENST00000334527 TRABDQ9H4I3 376 aa24.61■■□□□ 1.53
NDEL1-201ENST00000334527 SNCAIPQ9Y6H5 919 aa24.61■■□□□ 1.53
NDEL1-201ENST00000334527 LTBP3Q9NS15 1303 aa24.6■■□□□ 1.53
NDEL1-201ENST00000334527 ZBTB42B2RXF5 422 aa24.6■■□□□ 1.53
NDEL1-201ENST00000334527 GOLGA8MH3BSY2 632 aa24.6■■□□□ 1.53
NDEL1-201ENST00000334527 ARIH2O95376 493 aa24.6■■□□□ 1.53
NDEL1-201ENST00000334527 ATP6V1G2O95670 118 aa24.6■■□□□ 1.53
NDEL1-201ENST00000334527 SLC25A11Q02978 314 aaKnown RBP24.6■■□□□ 1.53
NDEL1-201ENST00000334527 VGLL4Q14135 290 aa24.6■■□□□ 1.53
NDEL1-201ENST00000334527 TMEM132AQ24JP5 1023 aa24.6■■□□□ 1.53
NDEL1-201ENST00000334527 KCNT1Q5JUK3 1230 aa24.6■■□□□ 1.53
NDEL1-201ENST00000334527 CDR2LQ86X02 465 aaPredicted RBP24.6■■□□□ 1.53
NDEL1-201ENST00000334527 CEP120Q8N960 986 aa24.6■■□□□ 1.53
NDEL1-201ENST00000334527 RMDN2Q96LZ7 410 aa24.6■■□□□ 1.53
NDEL1-201ENST00000334527 PITPNM3Q9BZ71 974 aa24.6■■□□□ 1.53
NDEL1-201ENST00000334527 SPATC1LQ9H0A9 340 aa24.6■■□□□ 1.53
NDEL1-201ENST00000334527 KIF9Q9HAQ2 790 aa24.6■■□□□ 1.53
NDEL1-201ENST00000334527 CYTH4Q9UIA0 394 aa24.6■■□□□ 1.53
NDEL1-201ENST00000334527 NDC80O14777 642 aa24.6■■□□□ 1.53
NDEL1-201ENST00000334527 GAS2O43903 313 aaKnown RBP24.6■■□□□ 1.53
NDEL1-201ENST00000334527 USP2O75604 605 aaPredicted RBP24.6■■□□□ 1.53
NDEL1-201ENST00000334527 KRT19P08727 400 aa24.6■■□□□ 1.53
NDEL1-201ENST00000334527 OTUD4Q01804 1114 aaKnown RBP24.6■■□□□ 1.53
NDEL1-201ENST00000334527 HSDL1Q3SXM5 330 aa24.6■■□□□ 1.53
NDEL1-201ENST00000334527 ATF7IP2Q5U623 682 aa24.6■■□□□ 1.53
NDEL1-201ENST00000334527 TSHZ1Q6ZSZ6 1077 aa24.6■■□□□ 1.53
NDEL1-201ENST00000334527 CCDC91Q7Z6B0 441 aa24.6■■□□□ 1.53
NDEL1-201ENST00000334527 PNMA8AQ86V59 439 aaPredicted RBP24.6■■□□□ 1.53
NDEL1-201ENST00000334527 FITM2Q8N6M3 262 aa24.6■■□□□ 1.53
NDEL1-201ENST00000334527 MAGEC3Q8TD91 643 aa24.6■■□□□ 1.53
NDEL1-201ENST00000334527 MRRFQ96E11 262 aaKnown RBP24.6■■□□□ 1.53
NDEL1-201ENST00000334527 GPR20Q99678 358 aa24.6■■□□□ 1.53
NDEL1-201ENST00000334527 C10orf88Q9H8K7 445 aa24.6■■□□□ 1.53
NDEL1-201ENST00000334527 RXFP1Q9HBX9 757 aa24.6■■□□□ 1.53
NDEL1-201ENST00000334527 PPP2R3BQ9Y5P8 575 aa24.6■■□□□ 1.53
NDEL1-201ENST00000334527 UTRNP46939 3433 aa24.6■■□□□ 1.53
NDEL1-201ENST00000334527 SIGLEC16A6NMB1 481 aa24.59■■□□□ 1.53
NDEL1-201ENST00000334527 B4GALT5O43286 388 aa24.59■■□□□ 1.53
NDEL1-201ENST00000334527 LRCH4O75427 683 aa24.59■■□□□ 1.53
NDEL1-201ENST00000334527 BANF1O75531 89 aa24.59■■□□□ 1.53
NDEL1-201ENST00000334527 ASMTLO95671 621 aa24.59■■□□□ 1.53
NDEL1-201ENST00000334527 GJB1P08034 283 aa24.59■■□□□ 1.53
NDEL1-201ENST00000334527 PROZP22891 400 aa24.59■■□□□ 1.53
NDEL1-201ENST00000334527 IL1R2P27930 398 aa24.59■■□□□ 1.53
NDEL1-201ENST00000334527 BNIP1Q12981 228 aa24.59■■□□□ 1.53
NDEL1-201ENST00000334527 FAM47EQ6ZV65 393 aa24.59■■□□□ 1.53
NDEL1-201ENST00000334527 CEP57Q86XR8 500 aa24.59■■□□□ 1.53
NDEL1-201ENST00000334527 ANKMY2Q8IV38 441 aa24.59■■□□□ 1.53
NDEL1-201ENST00000334527 ARFGAP1Q8N6T3 406 aa24.59■■□□□ 1.53
NDEL1-201ENST00000334527 ACTL9Q8TC94 416 aa24.59■■□□□ 1.53
NDEL1-201ENST00000334527 CNKSR2Q8WXI2 1034 aa24.59■■□□□ 1.53
NDEL1-201ENST00000334527 NLRP4Q96MN2 994 aa24.59■■□□□ 1.53
NDEL1-201ENST00000334527 KLHL14Q9P2G3 628 aa24.59■■□□□ 1.53
NDEL1-201ENST00000334527 BAIAP2L1Q9UHR4 511 aa24.59■■□□□ 1.53
NDEL1-201ENST00000334527 NOP56O00567 594 aaKnown RBP24.59■■□□□ 1.53
NDEL1-201ENST00000334527 PRPF4O43172 522 aaKnown RBP eCLIP24.59■■□□□ 1.53
NDEL1-201ENST00000334527 B4GALT4O60513 344 aa24.59■■□□□ 1.53
NDEL1-201ENST00000334527 PSMC1P62191 440 aaKnown RBP24.59■■□□□ 1.53
NDEL1-201ENST00000334527 HIF1AQ16665 826 aa24.59■■□□□ 1.53
NDEL1-201ENST00000334527 GRAMD1AQ96CP6 724 aa24.59■■□□□ 1.53
NDEL1-201ENST00000334527 SMC6Q96SB8 1091 aa24.59■■□□□ 1.53
NDEL1-201ENST00000334527 PTPRHQ9HD43 1115 aa24.59■■□□□ 1.53
NDEL1-201ENST00000334527 PNMA3Q9UL41 463 aa24.59■■□□□ 1.53
NDEL1-201ENST00000334527 IGKV6-21A0A0C4DH24 114 aa24.58■■□□□ 1.53
NDEL1-201ENST00000334527 INO80B-WBP1J3KQ70 363 aa24.58■■□□□ 1.53
NDEL1-201ENST00000334527 MED7O43513 233 aa24.58■■□□□ 1.53
NDEL1-201ENST00000334527 CST8O60676 142 aa24.58■■□□□ 1.53
NDEL1-201ENST00000334527 KRT7P08729 469 aa24.58■■□□□ 1.53
NDEL1-201ENST00000334527 CTCFP49711 727 aaPredicted RBP24.58■■□□□ 1.53
NDEL1-201ENST00000334527 GDF10P55107 478 aa24.58■■□□□ 1.53
NDEL1-201ENST00000334527 KCNJ2P63252 427 aa24.58■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms