RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 IPMKQ8NFU5 416 aa15.7■□□□□ 0.1
C9orf47-201ENST00000334490 SYT15Q9BQS2 421 aa15.7■□□□□ 0.1
C9orf47-201ENST00000334490 KCNMB3Q9NPA1 279 aa15.7■□□□□ 0.1
C9orf47-201ENST00000334490 PAK5Q9P286 719 aa15.7■□□□□ 0.1
C9orf47-201ENST00000334490 ZC3H7BQ9UGR2 993 aaKnown RBP15.7■□□□□ 0.1
C9orf47-201ENST00000334490 NRCAMQ92823 1304 aa15.7■□□□□ 0.1
C9orf47-201ENST00000334490 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.7■□□□□ 0.1
C9orf47-201ENST00000334490 TMEM88BA6NKF7 163 aa15.7■□□□□ 0.1
C9orf47-201ENST00000334490 ZNF177Q13360 481 aaPredicted RBP15.7■□□□□ 0.1
C9orf47-201ENST00000334490 PPWD1Q96BP3 646 aaKnown RBP15.7■□□□□ 0.1
C9orf47-201ENST00000334490 KLHL29Q96CT2 875 aa15.7■□□□□ 0.1
C9orf47-201ENST00000334490 C9orf72Q96LT7 481 aa15.7■□□□□ 0.1
C9orf47-201ENST00000334490 AKT1P31749 480 aa15.7■□□□□ 0.1
C9orf47-201ENST00000334490 ZBTB18Q99592 522 aa15.7■□□□□ 0.1
C9orf47-201ENST00000334490 APBA2Q99767 749 aa15.7■□□□□ 0.1
C9orf47-201ENST00000334490 ELAC2Q9BQ52 826 aaKnown RBP15.7■□□□□ 0.1
C9orf47-201ENST00000334490 ZNF518BQ9C0D4 1074 aa15.7■□□□□ 0.1
C9orf47-201ENST00000334490 CYP4F11Q9HBI6 524 aa15.7■□□□□ 0.1
C9orf47-201ENST00000334490 A0A087X0B3 334 aa15.69■□□□□ 0.1
C9orf47-201ENST00000334490 ESRRBO95718 433 aa15.69■□□□□ 0.1
C9orf47-201ENST00000334490 ITIH2P19823 946 aa15.69■□□□□ 0.1
C9orf47-201ENST00000334490 ACAT1P24752 427 aaKnown RBP15.69■□□□□ 0.1
C9orf47-201ENST00000334490 PDCLQ13371 301 aa15.69■□□□□ 0.1
C9orf47-201ENST00000334490 SLC25A41Q8N5S1 370 aa15.69■□□□□ 0.1
C9orf47-201ENST00000334490 HAS1Q92839 578 aa15.69■□□□□ 0.1
C9orf47-201ENST00000334490 BTBD6Q96KE9 485 aa15.69■□□□□ 0.1
C9orf47-201ENST00000334490 DRC3Q9H069 523 aa15.69■□□□□ 0.1
C9orf47-201ENST00000334490 CASQ2O14958 399 aaPredicted RBP15.69■□□□□ 0.1
C9orf47-201ENST00000334490 MTSS1O43312 755 aa15.69■□□□□ 0.1
C9orf47-201ENST00000334490 PRKAR2AP13861 404 aaKnown RBP15.69■□□□□ 0.1
C9orf47-201ENST00000334490 EFEMP1Q12805 493 aa15.69■□□□□ 0.1
C9orf47-201ENST00000334490 MTM1Q13496 603 aa15.69■□□□□ 0.1
C9orf47-201ENST00000334490 FIGNQ5HY92 759 aa15.69■□□□□ 0.1
C9orf47-201ENST00000334490 FAM171A1Q5VUB5 890 aa15.69■□□□□ 0.1
C9orf47-201ENST00000334490 SDE2Q6IQ49 451 aa15.69■□□□□ 0.1
C9orf47-201ENST00000334490 KRT35Q92764 455 aa15.69■□□□□ 0.1
C9orf47-201ENST00000334490 PORCNQ9H237 461 aa15.69■□□□□ 0.1
C9orf47-201ENST00000334490 EPS15L1Q9UBC2 864 aa15.69■□□□□ 0.1
C9orf47-201ENST00000334490 PPARGC1AQ9UBK2 798 aaKnown RBP15.69■□□□□ 0.1
C9orf47-201ENST00000334490 XPO7Q9UIA9 1087 aaKnown RBP15.69■□□□□ 0.1
C9orf47-201ENST00000334490 TPX2Q9ULW0 747 aaKnown RBP15.69■□□□□ 0.1
C9orf47-201ENST00000334490 F8VZ95 297 aa15.69■□□□□ 0.1
C9orf47-201ENST00000334490 RRM1P23921 792 aa15.69■□□□□ 0.1
C9orf47-201ENST00000334490 GTF2A1P52655 376 aaPredicted RBP15.69■□□□□ 0.1
C9orf47-201ENST00000334490 IMPG1Q17R60 797 aa15.69■□□□□ 0.1
C9orf47-201ENST00000334490 FAM133BQ5BKY9 247 aaKnown RBP15.69■□□□□ 0.1
C9orf47-201ENST00000334490 ANGPTL8Q6UXH0 198 aa15.69■□□□□ 0.1
C9orf47-201ENST00000334490 BRSK2Q8IWQ3 736 aa15.69■□□□□ 0.1
C9orf47-201ENST00000334490 PDCD7Q8N8D1 485 aaKnown RBP15.69■□□□□ 0.1
C9orf47-201ENST00000334490 ADAM33Q9BZ11 813 aa15.69■□□□□ 0.1
C9orf47-201ENST00000334490 NEU2Q9Y3R4 380 aa15.69■□□□□ 0.1
C9orf47-201ENST00000334490 GSTA4O15217 222 aa15.69■□□□□ 0.1
C9orf47-201ENST00000334490 ESRRAP11474 423 aaPredicted RBP15.69■□□□□ 0.1
C9orf47-201ENST00000334490 GZMAP12544 262 aa15.69■□□□□ 0.1
C9orf47-201ENST00000334490 FLT3LGP49771 235 aa15.69■□□□□ 0.1
C9orf47-201ENST00000334490 EPHB3P54753 998 aa15.69■□□□□ 0.1
C9orf47-201ENST00000334490 IL1RL1Q01638 556 aa15.69■□□□□ 0.1
C9orf47-201ENST00000334490 MUM1Q2TAK8 710 aa15.69■□□□□ 0.1
C9orf47-201ENST00000334490 KCNT1Q5JUK3 1230 aa15.69■□□□□ 0.1
C9orf47-201ENST00000334490 SLC47A2Q86VL8 602 aa15.69■□□□□ 0.1
C9orf47-201ENST00000334490 GAD1Q99259 594 aa15.69■□□□□ 0.1
C9orf47-201ENST00000334490 GTPBP10A4D1E9 387 aaKnown RBP15.68■□□□□ 0.1
C9orf47-201ENST00000334490 LACTBL1A8MY62 500 aa15.68■□□□□ 0.1
C9orf47-201ENST00000334490 ATP9AO75110 1047 aa15.68■□□□□ 0.1
C9orf47-201ENST00000334490 ITGB5P18084 799 aa15.68■□□□□ 0.1
C9orf47-201ENST00000334490 SLC12A3P55017 1021 aa15.68■□□□□ 0.1
C9orf47-201ENST00000334490 CDKAL1Q5VV42 579 aa15.68■□□□□ 0.1
C9orf47-201ENST00000334490 MAP4K3Q8IVH8 894 aa15.68■□□□□ 0.1
C9orf47-201ENST00000334490 TPCN2Q8NHX9 752 aa15.68■□□□□ 0.1
C9orf47-201ENST00000334490 SNX19Q92543 992 aa15.68■□□□□ 0.1
C9orf47-201ENST00000334490 DNAJC7Q99615 494 aa15.68■□□□□ 0.1
C9orf47-201ENST00000334490 RBM12Q9NTZ6 932 aaKnown RBP15.68■□□□□ 0.1
C9orf47-201ENST00000334490 CCDC195A0A1B0GUA6 201 aa15.68■□□□□ 0.1
C9orf47-201ENST00000334490 F5H5T6 163 aa15.68■□□□□ 0.1
C9orf47-201ENST00000334490 MAP3K7O43318 606 aa15.68■□□□□ 0.1
C9orf47-201ENST00000334490 EIF4BP23588 611 aaKnown RBP15.68■□□□□ 0.1
C9orf47-201ENST00000334490 FAM131BQ86XD5 332 aa15.68■□□□□ 0.1
C9orf47-201ENST00000334490 NUDCD3Q8IVD9 361 aa15.68■□□□□ 0.1
C9orf47-201ENST00000334490 AIPL1Q9NZN9 384 aa15.68■□□□□ 0.1
C9orf47-201ENST00000334490 BARX2Q9UMQ3 279 aaPredicted RBP15.68■□□□□ 0.1
C9orf47-201ENST00000334490 FOXP2O15409 715 aa15.68■□□□□ 0.1
C9orf47-201ENST00000334490 STAT4Q14765 748 aa15.68■□□□□ 0.1
C9orf47-201ENST00000334490 MTHFD1LQ6UB35 978 aa15.68■□□□□ 0.1
C9orf47-201ENST00000334490 FAM172AQ8WUF8 416 aa15.68■□□□□ 0.1
C9orf47-201ENST00000334490 APOBEC2Q9Y235 224 aaKnown RBP15.68■□□□□ 0.1
C9orf47-201ENST00000334490 SLC12A8A0AV02 714 aa15.68■□□□□ 0.1
C9orf47-201ENST00000334490 NDUFS3O75489 264 aa15.68■□□□□ 0.1
C9orf47-201ENST00000334490 AVPR1AP37288 418 aa15.68■□□□□ 0.1
C9orf47-201ENST00000334490 NDST1P52848 882 aa15.68■□□□□ 0.1
C9orf47-201ENST00000334490 RBM43Q6ZSC3 357 aaKnown RBP15.68■□□□□ 0.1
C9orf47-201ENST00000334490 C1orf186Q6ZWK4 172 aa15.68■□□□□ 0.1
C9orf47-201ENST00000334490 JAMLQ86YT9 394 aa15.68■□□□□ 0.1
C9orf47-201ENST00000334490 FAM71DQ8N9W8 422 aa15.68■□□□□ 0.1
C9orf47-201ENST00000334490 PTPRN2Q92932 1015 aa15.68■□□□□ 0.1
C9orf47-201ENST00000334490 GNGT2O14610 69 aa15.67■□□□□ 0.1
C9orf47-201ENST00000334490 FBXO21O94952 628 aa15.67■□□□□ 0.1
C9orf47-201ENST00000334490 MAP3K6O95382 1288 aa15.67■□□□□ 0.1
C9orf47-201ENST00000334490 TKTL1P51854 596 aa15.67■□□□□ 0.1
C9orf47-201ENST00000334490 VSNL1P62760 191 aa15.67■□□□□ 0.1
C9orf47-201ENST00000334490 BST2Q10589 180 aaKnown RBP15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms