RNA–Protein interactions for RNA: ENST00000333990.10

POLR1B-202, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 4,376 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-202ENST00000333990 HDAC6Q9UBN7 1215 aa11.75□□□□□ -0.53
POLR1B-202ENST00000333990 MRFAP1Q9Y605 127 aa11.75□□□□□ -0.53
POLR1B-202ENST00000333990 CASZ1Q86V15 1759 aa11.75□□□□□ -0.53
POLR1B-202ENST00000333990 A0A087X0B3 334 aa11.75□□□□□ -0.53
POLR1B-202ENST00000333990 MNAT1P51948 309 aa11.75□□□□□ -0.53
POLR1B-202ENST00000333990 CENPCQ03188 943 aa11.75□□□□□ -0.53
POLR1B-202ENST00000333990 C1QBPQ07021 282 aaKnown RBP11.75□□□□□ -0.53
POLR1B-202ENST00000333990 ITGB3BPQ13352 177 aaPredicted RBP11.75□□□□□ -0.53
POLR1B-202ENST00000333990 BYSLQ13895 437 aaKnown RBP11.75□□□□□ -0.53
POLR1B-202ENST00000333990 PDK2Q15119 407 aa11.75□□□□□ -0.53
POLR1B-202ENST00000333990 FOXR2Q6PJQ5 311 aa11.75□□□□□ -0.53
POLR1B-202ENST00000333990 SPATA18Q8TC71 538 aa11.75□□□□□ -0.53
POLR1B-202ENST00000333990 ZNF384Q8TF68 577 aa11.75□□□□□ -0.53
POLR1B-202ENST00000333990 USP13Q92995 863 aaPredicted RBP11.75□□□□□ -0.53
POLR1B-202ENST00000333990 VCPIP1Q96JH7 1222 aa11.75□□□□□ -0.53
POLR1B-202ENST00000333990 ABCB6Q9NP58 842 aa11.75□□□□□ -0.53
POLR1B-202ENST00000333990 BTBD7Q9P203 1132 aa11.75□□□□□ -0.53
POLR1B-202ENST00000333990 NOVA2Q9UNW9 492 aaKnown RBP11.75□□□□□ -0.53
POLR1B-202ENST00000333990 TARSL2A2RTX5 802 aaKnown RBP11.74□□□□□ -0.53
POLR1B-202ENST00000333990 ARHGAP42A6NI28 874 aa11.74□□□□□ -0.53
POLR1B-202ENST00000333990 ITIH2P19823 946 aa11.74□□□□□ -0.53
POLR1B-202ENST00000333990 PPARDQ03181 441 aa11.74□□□□□ -0.53
POLR1B-202ENST00000333990 UGP2Q16851 508 aa11.74□□□□□ -0.53
POLR1B-202ENST00000333990 SHROOM1Q2M3G4 852 aaPredicted RBP11.74□□□□□ -0.53
POLR1B-202ENST00000333990 FAM171A1Q5VUB5 890 aa11.74□□□□□ -0.53
POLR1B-202ENST00000333990 DDX53Q86TM3 631 aaKnown RBP11.74□□□□□ -0.53
POLR1B-202ENST00000333990 RPRD1AQ96P16 312 aaPredicted RBP11.74□□□□□ -0.53
POLR1B-202ENST00000333990 GPR20Q99678 358 aa11.74□□□□□ -0.53
POLR1B-202ENST00000333990 TRIM54Q9BYV2 358 aa11.74□□□□□ -0.53
POLR1B-202ENST00000333990 CHST12Q9NRB3 414 aa11.74□□□□□ -0.53
POLR1B-202ENST00000333990 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.74□□□□□ -0.53
POLR1B-202ENST00000333990 E5RI56 91 aa11.74□□□□□ -0.53
POLR1B-202ENST00000333990 F5H5T6 163 aa11.74□□□□□ -0.53
POLR1B-202ENST00000333990 MMEP08473 750 aa11.74□□□□□ -0.53
POLR1B-202ENST00000333990 PMS2P54278 862 aa11.74□□□□□ -0.53
POLR1B-202ENST00000333990 AMPD2Q01433 879 aa11.74□□□□□ -0.53
POLR1B-202ENST00000333990 ZNF177Q13360 481 aaPredicted RBP11.74□□□□□ -0.53
POLR1B-202ENST00000333990 CAPSQ13938 189 aa11.74□□□□□ -0.53
POLR1B-202ENST00000333990 NID2Q14112 1375 aa11.74□□□□□ -0.53
POLR1B-202ENST00000333990 UNC93AQ86WB7 457 aa11.74□□□□□ -0.53
POLR1B-202ENST00000333990 PPM1NQ8N819 430 aa11.74□□□□□ -0.53
POLR1B-202ENST00000333990 DNAJC19Q96DA6 116 aa11.74□□□□□ -0.53
POLR1B-202ENST00000333990 MAML3Q96JK9 1138 aa11.74□□□□□ -0.53
POLR1B-202ENST00000333990 DEFB118Q96PH6 123 aa11.74□□□□□ -0.53
POLR1B-202ENST00000333990 MMTAG2Q9BU76 263 aaKnown RBP11.74□□□□□ -0.53
POLR1B-202ENST00000333990 AMACRQ9UHK6 382 aa11.74□□□□□ -0.53
POLR1B-202ENST00000333990 PPP1R11O60927 126 aaPredicted RBP11.74□□□□□ -0.53
POLR1B-202ENST00000333990 STIP1P31948 543 aaKnown RBP11.74□□□□□ -0.53
POLR1B-202ENST00000333990 SFSWAPQ12872 951 aaKnown RBP11.74□□□□□ -0.53
POLR1B-202ENST00000333990 NNTQ13423 1086 aa11.74□□□□□ -0.53
POLR1B-202ENST00000333990 CDH18Q13634 790 aa11.74□□□□□ -0.53
POLR1B-202ENST00000333990 MDH1BQ5I0G3 518 aa11.74□□□□□ -0.53
POLR1B-202ENST00000333990 PPHLN1Q8NEY8 458 aaKnown RBP11.74□□□□□ -0.53
POLR1B-202ENST00000333990 SMARCD1Q96GM5 515 aa11.74□□□□□ -0.53
POLR1B-202ENST00000333990 DUSP9Q99956 384 aaKnown RBP11.74□□□□□ -0.53
POLR1B-202ENST00000333990 FUCA2Q9BTY2 467 aa11.74□□□□□ -0.53
POLR1B-202ENST00000333990 THAP2Q9H0W7 228 aa11.74□□□□□ -0.53
POLR1B-202ENST00000333990 CYP4F11Q9HBI6 524 aa11.74□□□□□ -0.53
POLR1B-202ENST00000333990 RAB6BQ9NRW1 208 aa11.74□□□□□ -0.53
POLR1B-202ENST00000333990 GOLGA8MH3BSY2 632 aa11.74□□□□□ -0.53
POLR1B-202ENST00000333990 CLGNO14967 610 aa11.74□□□□□ -0.53
POLR1B-202ENST00000333990 SEPT4O43236 478 aa11.74□□□□□ -0.53
POLR1B-202ENST00000333990 IRF1P10914 325 aa11.74□□□□□ -0.53
POLR1B-202ENST00000333990 MBL2P11226 248 aaPredicted RBP11.74□□□□□ -0.53
POLR1B-202ENST00000333990 AVPR1AP37288 418 aa11.74□□□□□ -0.53
POLR1B-202ENST00000333990 NDST1P52848 882 aa11.74□□□□□ -0.53
POLR1B-202ENST00000333990 ITGA7Q13683 1181 aa11.74□□□□□ -0.53
POLR1B-202ENST00000333990 HSDL1Q3SXM5 330 aa11.74□□□□□ -0.53
POLR1B-202ENST00000333990 JADE1Q6IE81 842 aa11.74□□□□□ -0.53
POLR1B-202ENST00000333990 FRA10AC1Q70Z53 315 aa11.74□□□□□ -0.53
POLR1B-202ENST00000333990 NECAB2Q7Z6G3 386 aa11.74□□□□□ -0.53
POLR1B-202ENST00000333990 HASPINQ8TF76 798 aa11.74□□□□□ -0.53
POLR1B-202ENST00000333990 C7orf43Q8WVR3 580 aa11.74□□□□□ -0.53
POLR1B-202ENST00000333990 ZNF606Q8WXB4 792 aa11.74□□□□□ -0.53
POLR1B-202ENST00000333990 TNFRSF25Q93038 417 aa11.74□□□□□ -0.53
POLR1B-202ENST00000333990 ZBTB45Q96K62 511 aaPredicted RBP11.74□□□□□ -0.53
POLR1B-202ENST00000333990 DMAP1Q9NPF5 467 aaPredicted RBP11.74□□□□□ -0.53
POLR1B-202ENST00000333990 TLR8Q9NR97 1041 aaKnown RBP11.74□□□□□ -0.53
POLR1B-202ENST00000333990 OLA1Q9NTK5 396 aaKnown RBP11.74□□□□□ -0.53
POLR1B-202ENST00000333990 AIPL1Q9NZN9 384 aa11.74□□□□□ -0.53
POLR1B-202ENST00000333990 ZNF214Q9UL59 606 aaPredicted RBP11.74□□□□□ -0.53
POLR1B-202ENST00000333990 C2CD2Q9Y426 696 aa11.74□□□□□ -0.53
POLR1B-202ENST00000333990 DOT1LQ8TEK3 1739 aa11.74□□□□□ -0.53
POLR1B-202ENST00000333990 ADCY6O43306 1168 aa11.73□□□□□ -0.53
POLR1B-202ENST00000333990 ZBED8Q8IZ13 594 aa11.73□□□□□ -0.53
POLR1B-202ENST00000333990 CD99L2Q8TCZ2 262 aa11.73□□□□□ -0.53
POLR1B-202ENST00000333990 RAPGEF5Q92565 580 aa11.73□□□□□ -0.53
POLR1B-202ENST00000333990 WDR24Q96S15 920 aa11.73□□□□□ -0.53
POLR1B-202ENST00000333990 TSPYL2Q9H2G4 693 aaPredicted RBP11.73□□□□□ -0.53
POLR1B-202ENST00000333990 RABEP2Q9H5N1 569 aa11.73□□□□□ -0.53
POLR1B-202ENST00000333990 FAM96AQ9H5X1 160 aa11.73□□□□□ -0.53
POLR1B-202ENST00000333990 KLHL11Q9NVR0 708 aa11.73□□□□□ -0.53
POLR1B-202ENST00000333990 UXTQ9UBK9 157 aaPredicted RBP11.73□□□□□ -0.53
POLR1B-202ENST00000333990 A0A0A6YYK5 440 aaPredicted RBP11.73□□□□□ -0.53
POLR1B-202ENST00000333990 USP27XA6NNY8 438 aa11.73□□□□□ -0.53
POLR1B-202ENST00000333990 APRTP07741 180 aa11.73□□□□□ -0.53
POLR1B-202ENST00000333990 MMP3P08254 477 aa11.73□□□□□ -0.53
POLR1B-202ENST00000333990 SPATA31C1P0DKV0 1188 aa11.73□□□□□ -0.53
POLR1B-202ENST00000333990 MCL1Q07820 350 aa11.73□□□□□ -0.53
POLR1B-202ENST00000333990 NCAPHQ15003 741 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms