RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 RFC1P35251 1148 aaPredicted RBP15.36■□□□□ 0.05
TPM3-206ENST00000330188 PHKA2P46019 1235 aa15.36■□□□□ 0.05
TPM3-206ENST00000330188 SLC25A11Q02978 314 aaKnown RBP15.36■□□□□ 0.05
TPM3-206ENST00000330188 ARHGAP1Q07960 439 aa15.36■□□□□ 0.05
TPM3-206ENST00000330188 OASLQ15646 514 aaKnown RBP15.36■□□□□ 0.05
TPM3-206ENST00000330188 ZNF484Q5JVG2 852 aa15.36■□□□□ 0.05
TPM3-206ENST00000330188 JADE1Q6IE81 842 aa15.36■□□□□ 0.05
TPM3-206ENST00000330188 VSTM1Q6UX27 236 aa15.36■□□□□ 0.05
TPM3-206ENST00000330188 ARMCX2Q7L311 632 aa15.36■□□□□ 0.05
TPM3-206ENST00000330188 POLNQ7Z5Q5 900 aa15.36■□□□□ 0.05
TPM3-206ENST00000330188 LRRC34Q8IZ02 419 aa15.36■□□□□ 0.05
TPM3-206ENST00000330188 CXorf38Q8TB03 319 aa15.36■□□□□ 0.05
TPM3-206ENST00000330188 FAXDC2Q96IV6 333 aa15.36■□□□□ 0.05
TPM3-206ENST00000330188 CAPN7Q9Y6W3 813 aa15.36■□□□□ 0.05
TPM3-206ENST00000330188 CSDE1O75534 798 aaKnown RBP15.35■□□□□ 0.05
TPM3-206ENST00000330188 ITGB3P05106 788 aa15.35■□□□□ 0.05
TPM3-206ENST00000330188 LGALS2P05162 132 aa15.35■□□□□ 0.05
TPM3-206ENST00000330188 CETPP11597 493 aa15.35■□□□□ 0.05
TPM3-206ENST00000330188 KRT3P12035 628 aa15.35■□□□□ 0.05
TPM3-206ENST00000330188 ETS1P14921 441 aa15.35■□□□□ 0.05
TPM3-206ENST00000330188 PSMA2P25787 234 aa15.35■□□□□ 0.05
TPM3-206ENST00000330188 ARSEP51690 589 aa15.35■□□□□ 0.05
TPM3-206ENST00000330188 VCPP55072 806 aaKnown RBP15.35■□□□□ 0.05
TPM3-206ENST00000330188 GSCP56915 257 aaPredicted RBP15.35■□□□□ 0.05
TPM3-206ENST00000330188 POU5F1BQ06416 359 aa15.35■□□□□ 0.05
TPM3-206ENST00000330188 ORC1Q13415 861 aa15.35■□□□□ 0.05
TPM3-206ENST00000330188 GJC2Q5T442 439 aaPredicted RBP15.35■□□□□ 0.05
TPM3-206ENST00000330188 CCDC121Q6ZUS5 278 aa15.35■□□□□ 0.05
TPM3-206ENST00000330188 ARFGAP1Q8N6T3 406 aa15.35■□□□□ 0.05
TPM3-206ENST00000330188 LINC01465Q8N7H1 131 aa15.35■□□□□ 0.05
TPM3-206ENST00000330188 SLC4A11Q8NBS3 891 aa15.35■□□□□ 0.05
TPM3-206ENST00000330188 SHCBP1Q8NEM2 672 aa15.35■□□□□ 0.05
TPM3-206ENST00000330188 HAUS1Q96CS2 278 aa15.35■□□□□ 0.05
TPM3-206ENST00000330188 TWNKQ96RR1 684 aa15.35■□□□□ 0.05
TPM3-206ENST00000330188 CPXM1Q96SM3 734 aa15.35■□□□□ 0.05
TPM3-206ENST00000330188 RBM15Q96T37 977 aaKnown RBP eCLIP15.35■□□□□ 0.05
TPM3-206ENST00000330188 OSBPL7Q9BZF2 842 aa15.35■□□□□ 0.05
TPM3-206ENST00000330188 SMYD3Q9H7B4 428 aa15.35■□□□□ 0.05
TPM3-206ENST00000330188 EFCC1Q9HA90 598 aa15.35■□□□□ 0.05
TPM3-206ENST00000330188 HMGXB4Q9UGU5 601 aa15.35■□□□□ 0.05
TPM3-206ENST00000330188 LGALS13Q9UHV8 139 aa15.35■□□□□ 0.05
TPM3-206ENST00000330188 SRCAPQ6ZRS2 3230 aa15.35■□□□□ 0.05
TPM3-206ENST00000330188 A0A087WZ62 844 aa15.35■□□□□ 0.05
TPM3-206ENST00000330188 LRCH4O75427 683 aa15.35■□□□□ 0.05
TPM3-206ENST00000330188 MCF2P10911 925 aa15.35■□□□□ 0.05
TPM3-206ENST00000330188 MAGEA4P43358 317 aa15.35■□□□□ 0.05
TPM3-206ENST00000330188 IFNAR2P48551 515 aa15.35■□□□□ 0.05
TPM3-206ENST00000330188 PSMC1P62191 440 aaKnown RBP15.35■□□□□ 0.05
TPM3-206ENST00000330188 IFNLR1Q8IU57 520 aaPredicted RBP15.35■□□□□ 0.05
TPM3-206ENST00000330188 KIAA0319LQ8IZA0 1049 aa15.35■□□□□ 0.05
TPM3-206ENST00000330188 FNIP1Q8TF40 1166 aa15.35■□□□□ 0.05
TPM3-206ENST00000330188 NKD2Q969F2 451 aaPredicted RBP15.35■□□□□ 0.05
TPM3-206ENST00000330188 PPP1R16BQ96T49 567 aa15.35■□□□□ 0.05
TPM3-206ENST00000330188 FDXACB1Q9BRP7 624 aaPredicted RBP15.35■□□□□ 0.05
TPM3-206ENST00000330188 ELOVL4Q9GZR5 314 aa15.35■□□□□ 0.05
TPM3-206ENST00000330188 PDZD7Q9H5P4 517 aa15.35■□□□□ 0.05
TPM3-206ENST00000330188 TMEM120BA0PK00 339 aa15.34■□□□□ 0.05
TPM3-206ENST00000330188 FOXO6A8MYZ6 492 aa15.34■□□□□ 0.05
TPM3-206ENST00000330188 ITGAVP06756 1048 aa15.34■□□□□ 0.05
TPM3-206ENST00000330188 ABHD2P08910 425 aa15.34■□□□□ 0.05
TPM3-206ENST00000330188 IL1R2P27930 398 aa15.34■□□□□ 0.05
TPM3-206ENST00000330188 GJA5P36382 358 aa15.34■□□□□ 0.05
TPM3-206ENST00000330188 TNFAIP2Q03169 654 aa15.34■□□□□ 0.05
TPM3-206ENST00000330188 PTPN11Q06124 597 aaPredicted RBP15.34■□□□□ 0.05
TPM3-206ENST00000330188 CEP128Q6ZU80 1094 aa15.34■□□□□ 0.05
TPM3-206ENST00000330188 PIGWQ7Z7B1 504 aa15.34■□□□□ 0.05
TPM3-206ENST00000330188 XYLT1Q86Y38 959 aa15.34■□□□□ 0.05
TPM3-206ENST00000330188 CYP4X1Q8N118 509 aa15.34■□□□□ 0.05
TPM3-206ENST00000330188 SLC35B2Q8TB61 432 aa15.34■□□□□ 0.05
TPM3-206ENST00000330188 CPB2Q96IY4 423 aa15.34■□□□□ 0.05
TPM3-206ENST00000330188 ZWILCHQ9H900 591 aa15.34■□□□□ 0.05
TPM3-206ENST00000330188 TMEM51Q9NW97 253 aa15.34■□□□□ 0.05
TPM3-206ENST00000330188 PLXNB2O15031 1838 aa15.34■□□□□ 0.05
TPM3-206ENST00000330188 CILPO75339 1184 aa15.34■□□□□ 0.05
TPM3-206ENST00000330188 ERBB2P04626 1255 aa15.34■□□□□ 0.05
TPM3-206ENST00000330188 ACTN3Q08043 901 aaPredicted RBP15.34■□□□□ 0.05
TPM3-206ENST00000330188 GPS1Q13098 491 aa15.34■□□□□ 0.05
TPM3-206ENST00000330188 LAMC2Q13753 1193 aa15.34■□□□□ 0.05
TPM3-206ENST00000330188 STAT4Q14765 748 aa15.34■□□□□ 0.05
TPM3-206ENST00000330188 SPRED3Q2MJR0 410 aa15.34■□□□□ 0.05
TPM3-206ENST00000330188 SMTNL2Q2TAL5 461 aa15.34■□□□□ 0.05
TPM3-206ENST00000330188 TAPT1Q6NXT6 567 aa15.34■□□□□ 0.05
TPM3-206ENST00000330188 MAMDC4Q6UXC1 1216 aa15.34■□□□□ 0.05
TPM3-206ENST00000330188 CCDC197Q8NCU1 140 aa15.34■□□□□ 0.05
TPM3-206ENST00000330188 VRTNQ9H8Y1 702 aa15.34■□□□□ 0.05
TPM3-206ENST00000330188 SAYSD1Q9NPB0 183 aa15.34■□□□□ 0.05
TPM3-206ENST00000330188 METTL5Q9NRN9 209 aaKnown RBP15.34■□□□□ 0.05
TPM3-206ENST00000330188 EURLQ9NYK6 297 aa15.34■□□□□ 0.05
TPM3-206ENST00000330188 WDR35Q9P2L0 1181 aa15.34■□□□□ 0.05
TPM3-206ENST00000330188 TPX2Q9ULW0 747 aaKnown RBP15.34■□□□□ 0.05
TPM3-206ENST00000330188 CDH16O75309 829 aa15.33■□□□□ 0.04
TPM3-206ENST00000330188 MICAL2O94851 1124 aa15.33■□□□□ 0.04
TPM3-206ENST00000330188 ATICP31939 592 aa15.33■□□□□ 0.04
TPM3-206ENST00000330188 ZNF268Q14587 947 aaPredicted RBP15.33■□□□□ 0.04
TPM3-206ENST00000330188 CCDC142Q17RM4 750 aa15.33■□□□□ 0.04
TPM3-206ENST00000330188 CYP4F22Q6NT55 531 aa15.33■□□□□ 0.04
TPM3-206ENST00000330188 MGARPQ8TDB4 240 aa15.33■□□□□ 0.04
TPM3-206ENST00000330188 TMEM176AQ96HP8 235 aa15.33■□□□□ 0.04
TPM3-206ENST00000330188 TMEM121Q9BTD3 319 aa15.33■□□□□ 0.04
TPM3-206ENST00000330188 ASB7Q9H672 318 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms