RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 PTMAP06454 111 aaKnown RBP5.49□□□□□ -1.53
LRIT3-201ENST00000327908 ZNF132P52740 706 aa5.49□□□□□ -1.53
LRIT3-201ENST00000327908 MAPK8IP2Q13387 824 aaPredicted RBP5.49□□□□□ -1.53
LRIT3-201ENST00000327908 LCLAT1Q6UWP7 414 aa5.49□□□□□ -1.53
LRIT3-201ENST00000327908 CDR2LQ86X02 465 aaPredicted RBP5.49□□□□□ -1.53
LRIT3-201ENST00000327908 MRPL43Q8N983 215 aaKnown RBP5.49□□□□□ -1.53
LRIT3-201ENST00000327908 ANKRD52Q8NB46 1076 aa5.49□□□□□ -1.53
LRIT3-201ENST00000327908 KLHL23Q8NBE8 558 aa5.49□□□□□ -1.53
LRIT3-201ENST00000327908 B3GALNT2Q8NCR0 500 aa5.49□□□□□ -1.53
LRIT3-201ENST00000327908 VWCEQ96DN2 955 aa5.49□□□□□ -1.53
LRIT3-201ENST00000327908 TRMT2BQ96GJ1 504 aaKnown RBP5.49□□□□□ -1.53
LRIT3-201ENST00000327908 XPO4Q9C0E2 1151 aaKnown RBP5.49□□□□□ -1.53
LRIT3-201ENST00000327908 ZNF576Q9H609 170 aa5.49□□□□□ -1.53
LRIT3-201ENST00000327908 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.49□□□□□ -1.53
LRIT3-201ENST00000327908 SPDYE4A6NLX3 237 aa5.49□□□□□ -1.53
LRIT3-201ENST00000327908 TTLL13PA6NNM8 815 aa5.49□□□□□ -1.53
LRIT3-201ENST00000327908 TISP43B9A030 160 aa5.49□□□□□ -1.53
LRIT3-201ENST00000327908 XPO1O14980 1071 aaKnown RBP5.49□□□□□ -1.53
LRIT3-201ENST00000327908 CA3P07451 260 aa5.49□□□□□ -1.53
LRIT3-201ENST00000327908 RALAP11233 206 aa5.49□□□□□ -1.53
LRIT3-201ENST00000327908 KLRC2P26717 231 aa5.49□□□□□ -1.53
LRIT3-201ENST00000327908 ASPAP45381 313 aa5.49□□□□□ -1.53
LRIT3-201ENST00000327908 TUBP50607 506 aa5.49□□□□□ -1.53
LRIT3-201ENST00000327908 KLHL30Q0D2K2 578 aa5.49□□□□□ -1.53
LRIT3-201ENST00000327908 DRAP1Q14919 205 aaPredicted RBP5.49□□□□□ -1.53
LRIT3-201ENST00000327908 PTPN14Q15678 1187 aa5.49□□□□□ -1.53
LRIT3-201ENST00000327908 CLUL1Q15846 466 aa5.49□□□□□ -1.53
LRIT3-201ENST00000327908 GLRA4Q5JXX5 417 aa5.49□□□□□ -1.53
LRIT3-201ENST00000327908 PPM1LQ5SGD2 360 aa5.49□□□□□ -1.53
LRIT3-201ENST00000327908 ZBTB41Q5SVQ8 909 aa5.49□□□□□ -1.53
LRIT3-201ENST00000327908 CES5AQ6NT32 575 aa5.49□□□□□ -1.53
LRIT3-201ENST00000327908 FAM171BQ6P995 826 aa5.49□□□□□ -1.53
LRIT3-201ENST00000327908 VN1R2Q8NFZ6 395 aa5.49□□□□□ -1.53
LRIT3-201ENST00000327908 ZNF461Q8TAF7 563 aa5.49□□□□□ -1.53
LRIT3-201ENST00000327908 MICAL1Q8TDZ2 1067 aa5.49□□□□□ -1.53
LRIT3-201ENST00000327908 POF1BQ8WVV4 589 aa5.49□□□□□ -1.53
LRIT3-201ENST00000327908 ZNF516Q92618 1163 aa5.49□□□□□ -1.53
LRIT3-201ENST00000327908 MSANTD3Q96H12 275 aa5.49□□□□□ -1.53
LRIT3-201ENST00000327908 TLE6Q9H808 572 aa5.49□□□□□ -1.53
LRIT3-201ENST00000327908 MRPL47Q9HD33 250 aaKnown RBP5.49□□□□□ -1.53
LRIT3-201ENST00000327908 FBXW11Q9UKB1 542 aa5.49□□□□□ -1.53
LRIT3-201ENST00000327908 ZNF510Q9Y2H8 683 aa5.49□□□□□ -1.53
LRIT3-201ENST00000327908 F8VZ95 297 aa5.48□□□□□ -1.53
LRIT3-201ENST00000327908 TBC1D4O60343 1298 aa5.48□□□□□ -1.53
LRIT3-201ENST00000327908 MFAP3LO75121 409 aa5.48□□□□□ -1.53
LRIT3-201ENST00000327908 ATP1A3P13637 1013 aa5.48□□□□□ -1.53
LRIT3-201ENST00000327908 CD19P15391 556 aa5.48□□□□□ -1.53
LRIT3-201ENST00000327908 GNA15P30679 374 aa5.48□□□□□ -1.53
LRIT3-201ENST00000327908 CDH5P33151 784 aaPredicted RBP5.48□□□□□ -1.53
LRIT3-201ENST00000327908 JAM2P57087 298 aa5.48□□□□□ -1.53
LRIT3-201ENST00000327908 POLR2FP61218 127 aaKnown RBP5.48□□□□□ -1.53
LRIT3-201ENST00000327908 CDR2Q01850 454 aa5.48□□□□□ -1.53
LRIT3-201ENST00000327908 C1QBPQ07021 282 aaKnown RBP5.48□□□□□ -1.53
LRIT3-201ENST00000327908 NNTQ13423 1086 aa5.48□□□□□ -1.53
LRIT3-201ENST00000327908 RAPGEF1Q13905 1077 aa5.48□□□□□ -1.53
LRIT3-201ENST00000327908 ACAP1Q15027 740 aa5.48□□□□□ -1.53
LRIT3-201ENST00000327908 PREPLQ4J6C6 727 aaPredicted RBP5.48□□□□□ -1.53
LRIT3-201ENST00000327908 CBWD6Q4V339 395 aa5.48□□□□□ -1.53
LRIT3-201ENST00000327908 CBWD3Q5JTY5 395 aa5.48□□□□□ -1.53
LRIT3-201ENST00000327908 EFHC1Q5JVL4 640 aa5.48□□□□□ -1.53
LRIT3-201ENST00000327908 CBWD5Q5RIA9 395 aa5.48□□□□□ -1.53
LRIT3-201ENST00000327908 C9orf50Q5SZB4 431 aa5.48□□□□□ -1.53
LRIT3-201ENST00000327908 C1orf228Q6PIY5 440 aa5.48□□□□□ -1.53
LRIT3-201ENST00000327908 LMO3Q8TAP4 145 aa5.48□□□□□ -1.53
LRIT3-201ENST00000327908 CXorf38Q8TB03 319 aa5.48□□□□□ -1.53
LRIT3-201ENST00000327908 PPP1R13LQ8WUF5 828 aa5.48□□□□□ -1.53
LRIT3-201ENST00000327908 HEXIM2Q96MH2 286 aaKnown RBP5.48□□□□□ -1.53
LRIT3-201ENST00000327908 KLHL5Q96PQ7 755 aa5.48□□□□□ -1.53
LRIT3-201ENST00000327908 SLITRK1Q96PX8 696 aa5.48□□□□□ -1.53
LRIT3-201ENST00000327908 DNAJC7Q99615 494 aa5.48□□□□□ -1.53
LRIT3-201ENST00000327908 TCF25Q9BQ70 676 aa5.48□□□□□ -1.53
LRIT3-201ENST00000327908 RBSNQ9H1K0 784 aa5.48□□□□□ -1.53
LRIT3-201ENST00000327908 MIOSQ9NXC5 875 aa5.48□□□□□ -1.53
LRIT3-201ENST00000327908 CXXC1Q9P0U4 656 aaPredicted RBP5.48□□□□□ -1.53
LRIT3-201ENST00000327908 L1RE1Q9UN81 338 aa5.48□□□□□ -1.53
LRIT3-201ENST00000327908 NLRC5Q86WI3 1866 aa5.48□□□□□ -1.53
LRIT3-201ENST00000327908 TULP1O00294 542 aaPredicted RBP5.48□□□□□ -1.53
LRIT3-201ENST00000327908 NOL4O94818 638 aa5.48□□□□□ -1.53
LRIT3-201ENST00000327908 LATS1O95835 1130 aa5.48□□□□□ -1.53
LRIT3-201ENST00000327908 ITGB1P05556 798 aa5.48□□□□□ -1.53
LRIT3-201ENST00000327908 HAPLN1P10915 354 aaPredicted RBP5.48□□□□□ -1.53
LRIT3-201ENST00000327908 SLC2A3P11169 496 aa5.48□□□□□ -1.53
LRIT3-201ENST00000327908 HTR7P34969 479 aa5.48□□□□□ -1.53
LRIT3-201ENST00000327908 PLCB2Q00722 1185 aa5.48□□□□□ -1.53
LRIT3-201ENST00000327908 WSCD1Q658N2 575 aa5.48□□□□□ -1.53
LRIT3-201ENST00000327908 TMC6Q7Z403 805 aa5.48□□□□□ -1.53
LRIT3-201ENST00000327908 CCDC26Q8TAB7 109 aa5.48□□□□□ -1.53
LRIT3-201ENST00000327908 ZNF512Q96ME7 567 aaPredicted RBP5.48□□□□□ -1.53
LRIT3-201ENST00000327908 POP1Q99575 1024 aaKnown RBP5.48□□□□□ -1.53
LRIT3-201ENST00000327908 DCLK3Q9C098 648 aa5.48□□□□□ -1.53
LRIT3-201ENST00000327908 LRRC4Q9HBW1 653 aa5.48□□□□□ -1.53
LRIT3-201ENST00000327908 CNGB3Q9NQW8 809 aa5.48□□□□□ -1.53
LRIT3-201ENST00000327908 OBP2AQ9NY56 170 aa5.48□□□□□ -1.53
LRIT3-201ENST00000327908 KIAA0100Q14667 2235 aaKnown RBP5.48□□□□□ -1.53
LRIT3-201ENST00000327908 PRRG1O14668 218 aa5.47□□□□□ -1.53
LRIT3-201ENST00000327908 THAP12O43422 761 aa5.47□□□□□ -1.53
LRIT3-201ENST00000327908 ZMYND10O75800 440 aa5.47□□□□□ -1.53
LRIT3-201ENST00000327908 ABLIM3O94929 683 aa5.47□□□□□ -1.53
LRIT3-201ENST00000327908 WEE2P0C1S8 567 aa5.47□□□□□ -1.53
LRIT3-201ENST00000327908 ATF2P15336 505 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms