RNA–Protein interactions for RNA: ENST00000323926.10

FN1-201, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-201ENST00000323926 TTC30AQ86WT1 665 aa13.13□□□□□ -0.31
FN1-201ENST00000323926 TTC30BQ8N4P2 665 aa13.13□□□□□ -0.31
FN1-201ENST00000323926 USP6NLQ92738 828 aa13.13□□□□□ -0.31
FN1-201ENST00000323926 SLC13A1Q9BZW2 595 aa13.13□□□□□ -0.31
FN1-201ENST00000323926 MAF1Q9H063 256 aa13.13□□□□□ -0.31
FN1-201ENST00000323926 CTNNAL1Q9UBT7 734 aa13.13□□□□□ -0.31
FN1-201ENST00000323926 PYCARDQ9ULZ3 195 aa13.13□□□□□ -0.31
FN1-201ENST00000323926 PIN4Q9Y237 131 aaKnown RBP13.13□□□□□ -0.31
FN1-201ENST00000323926 NUP205Q92621 2012 aa13.13□□□□□ -0.31
FN1-201ENST00000323926 SULT1E1P49888 294 aa13.13□□□□□ -0.31
FN1-201ENST00000323926 SERPINB8P50452 374 aa13.13□□□□□ -0.31
FN1-201ENST00000323926 ZNF484Q5JVG2 852 aa13.13□□□□□ -0.31
FN1-201ENST00000323926 PID1Q7Z2X4 250 aa13.13□□□□□ -0.31
FN1-201ENST00000323926 CEP70Q8NHQ1 597 aa13.13□□□□□ -0.31
FN1-201ENST00000323926 UHMK1Q8TAS1 419 aaKnown RBP13.13□□□□□ -0.31
FN1-201ENST00000323926 FAM161BQ96MY7 647 aa13.13□□□□□ -0.31
FN1-201ENST00000323926 KLC4Q9NSK0 619 aa13.13□□□□□ -0.31
FN1-201ENST00000323926 AHSPQ9NZD4 102 aa13.13□□□□□ -0.31
FN1-201ENST00000323926 NEU2Q9Y3R4 380 aa13.13□□□□□ -0.31
FN1-201ENST00000323926 ZNF609O15014 1411 aa13.13□□□□□ -0.31
FN1-201ENST00000323926 CES2O00748 559 aa13.13□□□□□ -0.31
FN1-201ENST00000323926 SUPT20HL2P0C7V6 817 aa13.13□□□□□ -0.31
FN1-201ENST00000323926 ITIH4Q14624 930 aa13.13□□□□□ -0.31
FN1-201ENST00000323926 PTRHD1Q6GMV3 140 aaKnown RBP13.13□□□□□ -0.31
FN1-201ENST00000323926 LUZP2Q86TE4 346 aa13.13□□□□□ -0.31
FN1-201ENST00000323926 CYP3A43Q9HB55 503 aa13.13□□□□□ -0.31
FN1-201ENST00000323926 SYBUQ9NX95 663 aa13.13□□□□□ -0.31
FN1-201ENST00000323926 IMPDH2P12268 514 aa13.13□□□□□ -0.31
FN1-201ENST00000323926 ACADSP16219 412 aa13.13□□□□□ -0.31
FN1-201ENST00000323926 KCNK10P57789 538 aa13.13□□□□□ -0.31
FN1-201ENST00000323926 RPL10AP62906 217 aaKnown RBP13.13□□□□□ -0.31
FN1-201ENST00000323926 SF3B3Q15393 1217 aaKnown RBP13.13□□□□□ -0.31
FN1-201ENST00000323926 SEPT1Q8WYJ6 367 aa13.13□□□□□ -0.31
FN1-201ENST00000323926 ILKAPQ9H0C8 392 aaPredicted RBP13.13□□□□□ -0.31
FN1-201ENST00000323926 SARS2Q9NP81 518 aaKnown RBP13.13□□□□□ -0.31
FN1-201ENST00000323926 NEDD4P46934 1319 aa13.13□□□□□ -0.31
FN1-201ENST00000323926 STK25O00506 426 aa13.13□□□□□ -0.31
FN1-201ENST00000323926 PPP2R1BP30154 601 aa13.13□□□□□ -0.31
FN1-201ENST00000323926 RRM2P31350 389 aa13.13□□□□□ -0.31
FN1-201ENST00000323926 WDR72Q3MJ13 1102 aa13.13□□□□□ -0.31
FN1-201ENST00000323926 CLEC4FQ8N1N0 589 aa13.13□□□□□ -0.31
FN1-201ENST00000323926 RNF149Q8NC42 400 aa13.13□□□□□ -0.31
FN1-201ENST00000323926 EEF2KMTQ96G04 330 aa13.13□□□□□ -0.31
FN1-201ENST00000323926 ERGIC2Q96RQ1 377 aa13.13□□□□□ -0.31
FN1-201ENST00000323926 GANQ9H2C0 597 aa13.13□□□□□ -0.31
FN1-201ENST00000323926 SPATA31D1Q6ZQQ2 1576 aa13.13□□□□□ -0.31
FN1-201ENST00000323926 SAC3D1A6NKF1 404 aa13.13□□□□□ -0.31
FN1-201ENST00000323926 EIF3HO15372 352 aaKnown RBP eCLIP13.13□□□□□ -0.311e-34■□□□□ 10.2
FN1-201ENST00000323926 TRIM71Q2Q1W2 868 aaKnown RBP13.13□□□□□ -0.31
FN1-201ENST00000323926 LRRC6Q86X45 466 aa13.13□□□□□ -0.31
FN1-201ENST00000323926 PHACTR1Q9C0D0 580 aa13.13□□□□□ -0.31
FN1-201ENST00000323926 TRPM5Q9NZQ8 1165 aa13.13□□□□□ -0.31
FN1-201ENST00000323926 PAIP2BQ9ULR5 123 aaKnown RBP13.13□□□□□ -0.31
FN1-201ENST00000323926 PRG3Q9Y2Y8 225 aaPredicted RBP13.13□□□□□ -0.31
FN1-201ENST00000323926 A0A0A6YYK5 440 aaPredicted RBP13.13□□□□□ -0.31
FN1-201ENST00000323926 KCNQ3O43525 872 aa13.13□□□□□ -0.31
FN1-201ENST00000323926 NAMPTP43490 491 aa13.13□□□□□ -0.31
FN1-201ENST00000323926 LHX1P48742 406 aa13.13□□□□□ -0.31
FN1-201ENST00000323926 RAB14P61106 215 aa13.13□□□□□ -0.31
FN1-201ENST00000323926 DYDC2Q96IM9 177 aa13.13□□□□□ -0.31
FN1-201ENST00000323926 VCPIP1Q96JH7 1222 aa13.13□□□□□ -0.31
FN1-201ENST00000323926 FBXO44Q9H4M3 255 aa13.13□□□□□ -0.31
FN1-201ENST00000323926 TLR7Q9NYK1 1049 aaKnown RBP13.13□□□□□ -0.31
FN1-201ENST00000323926 EEF2KO00418 725 aaKnown RBP13.12□□□□□ -0.31
FN1-201ENST00000323926 CRTAMO95727 393 aa13.12□□□□□ -0.31
FN1-201ENST00000323926 MRPS15P82914 257 aaKnown RBP13.12□□□□□ -0.31
FN1-201ENST00000323926 ADCK1Q86TW2 530 aa13.12□□□□□ -0.31
FN1-201ENST00000323926 LDHDQ86WU2 507 aa13.12□□□□□ -0.31
FN1-201ENST00000323926 PALB2Q86YC2 1186 aa13.12□□□□□ -0.31
FN1-201ENST00000323926 GPRC5AQ8NFJ5 357 aa13.12□□□□□ -0.31
FN1-201ENST00000323926 RAD21L1Q9H4I0 556 aa13.12□□□□□ -0.31
FN1-201ENST00000323926 KRT84Q9NSB2 600 aa13.12□□□□□ -0.31
FN1-201ENST00000323926 PDP2Q9P2J9 529 aa13.12□□□□□ -0.31
FN1-201ENST00000323926 CNTNAP4Q9C0A0 1308 aa13.12□□□□□ -0.31
FN1-201ENST00000323926 GUCY1A2P33402 732 aa13.12□□□□□ -0.31
FN1-201ENST00000323926 NAB1Q13506 487 aa13.12□□□□□ -0.31
FN1-201ENST00000323926 CYLC2Q14093 348 aaPredicted RBP13.12□□□□□ -0.31
FN1-201ENST00000323926 TMEM259Q4ZIN3 620 aa13.12□□□□□ -0.31
FN1-201ENST00000323926 ZCCHC8Q6NZY4 707 aaKnown RBP13.12□□□□□ -0.31
FN1-201ENST00000323926 HERC6Q8IVU3 1022 aa13.12□□□□□ -0.31
FN1-201ENST00000323926 THAP11Q96EK4 314 aa13.12□□□□□ -0.31
FN1-201ENST00000323926 ZNF512Q96ME7 567 aaPredicted RBP13.12□□□□□ -0.31
FN1-201ENST00000323926 PLEKHA4Q9H4M7 779 aa13.12□□□□□ -0.31
FN1-201ENST00000323926 PALMDQ9NP74 551 aa13.12□□□□□ -0.31
FN1-201ENST00000323926 FHOD1Q9Y613 1164 aa13.12□□□□□ -0.31
FN1-201ENST00000323926 ALDH7A1P49419 539 aaKnown RBP13.12□□□□□ -0.31
FN1-201ENST00000323926 CCT8P50990 548 aa13.12□□□□□ -0.31
FN1-201ENST00000323926 RAB27AP51159 221 aa13.12□□□□□ -0.31
FN1-201ENST00000323926 BCAT1P54687 386 aa13.12□□□□□ -0.31
FN1-201ENST00000323926 TWF1Q12792 350 aa13.12□□□□□ -0.31
FN1-201ENST00000323926 GNA13Q14344 377 aa13.12□□□□□ -0.31
FN1-201ENST00000323926 NFE2Q16621 373 aaPredicted RBP13.12□□□□□ -0.31
FN1-201ENST00000323926 PTPROQ16827 1216 aa13.12□□□□□ -0.31
FN1-201ENST00000323926 PCSK9Q8NBP7 692 aaKnown RBP13.12□□□□□ -0.31
FN1-201ENST00000323926 ARRDC4Q8NCT1 418 aa13.12□□□□□ -0.31
FN1-201ENST00000323926 COLEC11Q9BWP8 271 aa13.12□□□□□ -0.31
FN1-201ENST00000323926 CCDC90BQ9GZT6 254 aa13.12□□□□□ -0.31
FN1-201ENST00000323926 LNPEPQ9UIQ6 1025 aa13.12□□□□□ -0.31
FN1-201ENST00000323926 SLC25A13Q9UJS0 675 aa13.12□□□□□ -0.31
FN1-201ENST00000323926 NALCNQ8IZF0 1738 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms