RNA–Protein interactions for RNA: ENST00000317571.7

TTC39C-202, Transcript of tetratricopeptide repeat domain 39C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TTC39C, Length 2,442 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-202ENST00000317571 INTS9Q9NV88 658 aaKnown RBP21.75■■□□□ 1.07
TTC39C-202ENST00000317571 SAE1Q9UBE0 346 aaPredicted RBP21.75■■□□□ 1.07
TTC39C-202ENST00000317571 VTNP04004 478 aa21.74■■□□□ 1.07
TTC39C-202ENST00000317571 ZNF286BP0CG31 522 aa21.74■■□□□ 1.07
TTC39C-202ENST00000317571 OSBPP22059 807 aa21.74■■□□□ 1.07
TTC39C-202ENST00000317571 SF3A3Q12874 501 aaKnown RBP eCLIP21.74■■□□□ 1.07
TTC39C-202ENST00000317571 MPP2Q14168 576 aa21.74■■□□□ 1.07
TTC39C-202ENST00000317571 KCNT1Q5JUK3 1230 aa21.74■■□□□ 1.07
TTC39C-202ENST00000317571 ICE2Q659A1 982 aa21.74■■□□□ 1.07
TTC39C-202ENST00000317571 LRRC34Q8IZ02 419 aa21.74■■□□□ 1.07
TTC39C-202ENST00000317571 NFKBIZQ9BYH8 718 aa21.74■■□□□ 1.07
TTC39C-202ENST00000317571 C10orf88Q9H8K7 445 aa21.74■■□□□ 1.07
TTC39C-202ENST00000317571 TJP3O95049 919 aa21.74■■□□□ 1.07
TTC39C-202ENST00000317571 PTPN7P35236 360 aa21.74■■□□□ 1.07
TTC39C-202ENST00000317571 IFNAR2P48551 515 aa21.74■■□□□ 1.07
TTC39C-202ENST00000317571 SLC10A6Q3KNW5 377 aa21.74■■□□□ 1.07
TTC39C-202ENST00000317571 EAPPQ56P03 285 aaPredicted RBP21.74■■□□□ 1.07
TTC39C-202ENST00000317571 TFDP3Q5H9I0 405 aa21.74■■□□□ 1.07
TTC39C-202ENST00000317571 RNF187Q5TA31 235 aaPredicted RBP21.74■■□□□ 1.07
TTC39C-202ENST00000317571 LHX5Q9H2C1 402 aa21.74■■□□□ 1.07
TTC39C-202ENST00000317571 ZNF148Q9UQR1 794 aa21.74■■□□□ 1.07
TTC39C-202ENST00000317571 DNALI1O14645 258 aaPredicted RBP21.73■■□□□ 1.07
TTC39C-202ENST00000317571 IL18RAPO95256 599 aa21.73■■□□□ 1.07
TTC39C-202ENST00000317571 FASTKD3Q14CZ7 662 aaKnown RBP21.73■■□□□ 1.07
TTC39C-202ENST00000317571 LRRC14Q15048 493 aa21.73■■□□□ 1.07
TTC39C-202ENST00000317571 CPLX4Q7Z7G2 160 aa21.73■■□□□ 1.07
TTC39C-202ENST00000317571 XYLT1Q86Y38 959 aa21.73■■□□□ 1.07
TTC39C-202ENST00000317571 RELL1Q8IUW5 271 aa21.73■■□□□ 1.07
TTC39C-202ENST00000317571 ZCCHC9Q8N567 271 aaKnown RBP21.73■■□□□ 1.07
TTC39C-202ENST00000317571 CCDC134Q9H6E4 229 aa21.73■■□□□ 1.07
TTC39C-202ENST00000317571 PRMT7Q9NVM4 692 aaPredicted RBP21.73■■□□□ 1.07
TTC39C-202ENST00000317571 EURLQ9NYK6 297 aa21.73■■□□□ 1.07
TTC39C-202ENST00000317571 SIGLEC16A6NMB1 481 aa21.72■■□□□ 1.07
TTC39C-202ENST00000317571 ARF4P18085 180 aaPredicted RBP21.72■■□□□ 1.07
TTC39C-202ENST00000317571 PSMA2P25787 234 aa21.72■■□□□ 1.07
TTC39C-202ENST00000317571 ARSEP51690 589 aa21.72■■□□□ 1.07
TTC39C-202ENST00000317571 RBM15Q96T37 977 aaKnown RBP eCLIP21.72■■□□□ 1.07
TTC39C-202ENST00000317571 TMEM121Q9BTD3 319 aa21.72■■□□□ 1.07
TTC39C-202ENST00000317571 CXCL16Q9H2A7 254 aa21.72■■□□□ 1.07
TTC39C-202ENST00000317571 ZWILCHQ9H900 591 aa21.72■■□□□ 1.07
TTC39C-202ENST00000317571 ASAP2O43150 1006 aa21.72■■□□□ 1.07
TTC39C-202ENST00000317571 CILPO75339 1184 aa21.72■■□□□ 1.07
TTC39C-202ENST00000317571 FSBPO95073 299 aa21.72■■□□□ 1.07
TTC39C-202ENST00000317571 CD48P09326 243 aa21.72■■□□□ 1.07
TTC39C-202ENST00000317571 KRT3P12035 628 aa21.72■■□□□ 1.07
TTC39C-202ENST00000317571 CDR1P51861 262 aa21.72■■□□□ 1.07
TTC39C-202ENST00000317571 VCPP55072 806 aaKnown RBP21.72■■□□□ 1.07
TTC39C-202ENST00000317571 YWHAEP62258 255 aaKnown RBP21.72■■□□□ 1.07
TTC39C-202ENST00000317571 TAP1Q03518 808 aa21.72■■□□□ 1.07
TTC39C-202ENST00000317571 FAM187BQ17R55 369 aa21.72■■□□□ 1.07
TTC39C-202ENST00000317571 FASTKD5Q7L8L6 764 aaKnown RBP21.72■■□□□ 1.07
TTC39C-202ENST00000317571 METTL5Q9NRN9 209 aaKnown RBP21.72■■□□□ 1.07
TTC39C-202ENST00000317571 CEP83Q9Y592 693 aa21.72■■□□□ 1.07
TTC39C-202ENST00000317571 PLXNB2O15031 1838 aa21.72■■□□□ 1.07
TTC39C-202ENST00000317571 TMEM120BA0PK00 339 aa21.71■■□□□ 1.07
TTC39C-202ENST00000317571 TCEA3O75764 348 aa21.71■■□□□ 1.07
TTC39C-202ENST00000317571 COPS2P61201 443 aa21.71■■□□□ 1.07
TTC39C-202ENST00000317571 PSMC1P62191 440 aaKnown RBP21.71■■□□□ 1.07
TTC39C-202ENST00000317571 PTPN11Q06124 597 aaPredicted RBP21.71■■□□□ 1.07
TTC39C-202ENST00000317571 TAF5Q15542 800 aa21.71■■□□□ 1.07
TTC39C-202ENST00000317571 CACNA2D3Q8IZS8 1091 aa21.71■■□□□ 1.07
TTC39C-202ENST00000317571 SLC35B2Q8TB61 432 aa21.71■■□□□ 1.07
TTC39C-202ENST00000317571 AFG1LQ8WV93 481 aa21.71■■□□□ 1.07
TTC39C-202ENST00000317571 STMN4Q9H169 189 aaPredicted RBP21.71■■□□□ 1.07
TTC39C-202ENST00000317571 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.71■■□□□ 1.07
TTC39C-202ENST00000317571 MICAL2O94851 1124 aa21.71■■□□□ 1.07
TTC39C-202ENST00000317571 PECAM1P16284 738 aaPredicted RBP21.71■■□□□ 1.07
TTC39C-202ENST00000317571 CYP3A5P20815 502 aa21.71■■□□□ 1.07
TTC39C-202ENST00000317571 HNRNPH1P31943 449 aaKnown RBP21.71■■□□□ 1.07
TTC39C-202ENST00000317571 MAGEA4P43358 317 aa21.71■■□□□ 1.07
TTC39C-202ENST00000317571 PHKA2P46019 1235 aa21.71■■□□□ 1.07
TTC39C-202ENST00000317571 CCDC142Q17RM4 750 aa21.71■■□□□ 1.07
TTC39C-202ENST00000317571 ZNF792Q3KQV3 632 aa21.71■■□□□ 1.07
TTC39C-202ENST00000317571 ZNF484Q5JVG2 852 aa21.71■■□□□ 1.07
TTC39C-202ENST00000317571 HP1BP3Q5SSJ5 553 aaPredicted RBP21.71■■□□□ 1.07
TTC39C-202ENST00000317571 GKAP1Q5VSY0 366 aaPredicted RBP21.71■■□□□ 1.07
TTC39C-202ENST00000317571 MAP1SQ66K74 1059 aaPredicted RBP21.71■■□□□ 1.07
TTC39C-202ENST00000317571 CYP4F22Q6NT55 531 aa21.71■■□□□ 1.07
TTC39C-202ENST00000317571 ILDR2Q71H61 639 aa21.71■■□□□ 1.07
TTC39C-202ENST00000317571 IFNLR1Q8IU57 520 aaPredicted RBP21.71■■□□□ 1.07
TTC39C-202ENST00000317571 CNPY4Q8N129 248 aa21.71■■□□□ 1.07
TTC39C-202ENST00000317571 BBOF1Q8ND07 529 aa21.71■■□□□ 1.07
TTC39C-202ENST00000317571 MGARPQ8TDB4 240 aa21.71■■□□□ 1.07
TTC39C-202ENST00000317571 NKD2Q969F2 451 aaPredicted RBP21.71■■□□□ 1.07
TTC39C-202ENST00000317571 CABS1Q96KC9 395 aa21.71■■□□□ 1.07
TTC39C-202ENST00000317571 MLXIPLQ9NP71 852 aa21.71■■□□□ 1.07
TTC39C-202ENST00000317571 TBK1Q9UHD2 729 aa21.71■■□□□ 1.07
TTC39C-202ENST00000317571 STRIP2Q9ULQ0 834 aa21.71■■□□□ 1.07
TTC39C-202ENST00000317571 ASB14A6NK59 587 aa21.7■■□□□ 1.06
TTC39C-202ENST00000317571 MCF2P10911 925 aa21.7■■□□□ 1.06
TTC39C-202ENST00000317571 GCAP28676 217 aa21.7■■□□□ 1.06
TTC39C-202ENST00000317571 POLR2BP30876 1174 aaKnown RBP21.7■■□□□ 1.06
TTC39C-202ENST00000317571 CETN2P41208 172 aa21.7■■□□□ 1.06
TTC39C-202ENST00000317571 GDF10P55107 478 aa21.7■■□□□ 1.06
TTC39C-202ENST00000317571 DYNLT1P63172 113 aa21.7■■□□□ 1.06
TTC39C-202ENST00000317571 GPS1Q13098 491 aa21.7■■□□□ 1.06
TTC39C-202ENST00000317571 RAB6CQ53S08 254 aa21.7■■□□□ 1.06
TTC39C-202ENST00000317571 TAOK1Q7L7X3 1001 aa21.7■■□□□ 1.06
TTC39C-202ENST00000317571 POLNQ7Z5Q5 900 aa21.7■■□□□ 1.06
TTC39C-202ENST00000317571 SHCBP1Q8NEM2 672 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms