RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 SYAP1Q96A49 352 aaPredicted RBP28.32■■■□□ 2.12
CDKN2A-201ENST00000304494 E2F7Q96AV8 911 aa28.32■■■□□ 2.12
CDKN2A-201ENST00000304494 FUBP3Q96I24 572 aaKnown RBP eCLIP28.32■■■□□ 2.12
CDKN2A-201ENST00000304494 ATXN3LQ9H3M9 355 aa28.32■■■□□ 2.12
CDKN2A-201ENST00000304494 CDH9Q9ULB4 789 aa28.32■■■□□ 2.12
CDKN2A-201ENST00000304494 MUC6Q6W4X9 2439 aa28.32■■■□□ 2.12
CDKN2A-201ENST00000304494 FAM163BP0C2L3 166 aa28.31■■■□□ 2.12
CDKN2A-201ENST00000304494 CASP4P49662 377 aa28.31■■■□□ 2.12
CDKN2A-201ENST00000304494 STARD6P59095 220 aa28.31■■■□□ 2.12
CDKN2A-201ENST00000304494 RPL10AP62906 217 aaKnown RBP28.31■■■□□ 2.12
CDKN2A-201ENST00000304494 PRKCQQ04759 706 aa28.31■■■□□ 2.12
CDKN2A-201ENST00000304494 BIRC3Q13489 604 aa28.31■■■□□ 2.12
CDKN2A-201ENST00000304494 MAPRE1Q15691 268 aaKnown RBP28.31■■■□□ 2.12
CDKN2A-201ENST00000304494 WDR72Q3MJ13 1102 aa28.31■■■□□ 2.12
CDKN2A-201ENST00000304494 CFAP221Q4G0U5 840 aa28.31■■■□□ 2.12
CDKN2A-201ENST00000304494 SLC44A4Q53GD3 710 aa28.31■■■□□ 2.12
CDKN2A-201ENST00000304494 GAREM2Q75VX8 874 aa28.31■■■□□ 2.12
CDKN2A-201ENST00000304494 SPATA2LQ8IUW3 424 aaPredicted RBP28.31■■■□□ 2.12
CDKN2A-201ENST00000304494 GUF1Q8N442 669 aaKnown RBP28.31■■■□□ 2.12
CDKN2A-201ENST00000304494 PLEKHO2Q8TD55 490 aa28.31■■■□□ 2.12
CDKN2A-201ENST00000304494 GIPC2Q8TF65 315 aa28.31■■■□□ 2.12
CDKN2A-201ENST00000304494 DEPDC1BQ8WUY9 529 aa28.31■■■□□ 2.12
CDKN2A-201ENST00000304494 LRRIQ3A6PVS8 624 aaPredicted RBP28.3■■■□□ 2.12
CDKN2A-201ENST00000304494 PI15O43692 258 aa28.3■■■□□ 2.12
CDKN2A-201ENST00000304494 TACC1O75410 805 aa28.3■■■□□ 2.12
CDKN2A-201ENST00000304494 SNW1Q13573 536 aaKnown RBP28.3■■■□□ 2.12
CDKN2A-201ENST00000304494 MLF2Q15773 248 aaPredicted RBP28.3■■■□□ 2.12
CDKN2A-201ENST00000304494 NFIL3Q16649 462 aa28.3■■■□□ 2.12
CDKN2A-201ENST00000304494 CEP135Q66GS9 1140 aa28.3■■■□□ 2.12
CDKN2A-201ENST00000304494 FAM171BQ6P995 826 aa28.3■■■□□ 2.12
CDKN2A-201ENST00000304494 C4orf50Q6ZRC1 276 aa28.3■■■□□ 2.12
CDKN2A-201ENST00000304494 SYT15Q9BQS2 421 aa28.3■■■□□ 2.12
CDKN2A-201ENST00000304494 TRMT61BQ9BVS5 477 aaKnown RBP28.3■■■□□ 2.12
CDKN2A-201ENST00000304494 SNX25Q9H3E2 840 aa28.3■■■□□ 2.12
CDKN2A-201ENST00000304494 RMND1Q9NWS8 449 aa28.3■■■□□ 2.12
CDKN2A-201ENST00000304494 MAPK8IP1Q9UQF2 711 aa28.3■■■□□ 2.12
CDKN2A-201ENST00000304494 PSMC3P17980 439 aa28.29■■■□□ 2.12
CDKN2A-201ENST00000304494 MYL6P60660 151 aa28.29■■■□□ 2.12
CDKN2A-201ENST00000304494 FAM160A1Q05DH4 1040 aa28.29■■■□□ 2.12
CDKN2A-201ENST00000304494 VITQ6UXI7 678 aa28.29■■■□□ 2.12
CDKN2A-201ENST00000304494 TMC2Q8TDI7 906 aa28.29■■■□□ 2.12
CDKN2A-201ENST00000304494 DNASE1L2Q92874 299 aa28.29■■■□□ 2.12
CDKN2A-201ENST00000304494 MYBPHLA2RUH7 354 aa28.28■■■□□ 2.12
CDKN2A-201ENST00000304494 MAPK13O15264 365 aa28.28■■■□□ 2.12
CDKN2A-201ENST00000304494 HCRTO43612 131 aa28.28■■■□□ 2.12
CDKN2A-201ENST00000304494 CSH1P0DML2 217 aa28.28■■■□□ 2.12
CDKN2A-201ENST00000304494 CSH2P0DML3 217 aa28.28■■■□□ 2.12
CDKN2A-201ENST00000304494 NR2F2P24468 414 aa28.28■■■□□ 2.12
CDKN2A-201ENST00000304494 CYP2F1P24903 491 aa28.28■■■□□ 2.12
CDKN2A-201ENST00000304494 LMO2P25791 158 aa28.28■■■□□ 2.12
CDKN2A-201ENST00000304494 RPL13P26373 211 aaKnown RBP28.28■■■□□ 2.12
CDKN2A-201ENST00000304494 GNL1P36915 607 aaPredicted RBP28.28■■■□□ 2.12
CDKN2A-201ENST00000304494 VIPR2P41587 438 aa28.28■■■□□ 2.12
CDKN2A-201ENST00000304494 GRM2Q14416 872 aa28.28■■■□□ 2.12
CDKN2A-201ENST00000304494 GPR158Q5T848 1215 aa28.28■■■□□ 2.12
CDKN2A-201ENST00000304494 TDRD10Q5VZ19 366 aaKnown RBP28.28■■■□□ 2.12
CDKN2A-201ENST00000304494 IRF7Q92985 503 aa28.28■■■□□ 2.12
CDKN2A-201ENST00000304494 XYLT2Q9H1B5 865 aa28.28■■■□□ 2.12
CDKN2A-201ENST00000304494 BRD9Q9H8M2 597 aa28.28■■■□□ 2.12
CDKN2A-201ENST00000304494 VRTNQ9H8Y1 702 aa28.28■■■□□ 2.12
CDKN2A-201ENST00000304494 ZMYM5Q9UJ78 669 aa28.28■■■□□ 2.12
CDKN2A-201ENST00000304494 HOOK1Q9UJC3 728 aaKnown RBP28.28■■■□□ 2.12
CDKN2A-201ENST00000304494 SIT1Q9Y3P8 196 aa28.28■■■□□ 2.12
CDKN2A-201ENST00000304494 C4BPAP04003 597 aaKnown RBP28.27■■■□□ 2.12
CDKN2A-201ENST00000304494 PNOCQ13519 176 aa28.27■■■□□ 2.12
CDKN2A-201ENST00000304494 NCOA4Q13772 614 aa28.27■■■□□ 2.12
CDKN2A-201ENST00000304494 STXBP5Q5T5C0 1151 aa28.27■■■□□ 2.12
CDKN2A-201ENST00000304494 MFSD6LQ8IWD5 586 aa28.27■■■□□ 2.12
CDKN2A-201ENST00000304494 CCDC105Q8IYK2 499 aa28.27■■■□□ 2.12
CDKN2A-201ENST00000304494 ENGASEQ8NFI3 743 aa28.27■■■□□ 2.12
CDKN2A-201ENST00000304494 OR6B3Q8NGW1 331 aa28.27■■■□□ 2.12
CDKN2A-201ENST00000304494 TASP1Q9H6P5 420 aa28.27■■■□□ 2.12
CDKN2A-201ENST00000304494 IL21Q9HBE4 155 aa28.27■■■□□ 2.12
CDKN2A-201ENST00000304494 MAGEC2Q9UBF1 373 aaPredicted RBP28.27■■■□□ 2.12
CDKN2A-201ENST00000304494 NXF1Q9UBU9 619 aaKnown RBP28.27■■■□□ 2.12
CDKN2A-201ENST00000304494 KANSL1LA0AUZ9 987 aa28.26■■■□□ 2.11
CDKN2A-201ENST00000304494 IKBKBO14920 756 aa28.26■■■□□ 2.11
CDKN2A-201ENST00000304494 ATP2C2O75185 946 aa28.26■■■□□ 2.11
CDKN2A-201ENST00000304494 CLSTN1O94985 981 aa28.26■■■□□ 2.11
CDKN2A-201ENST00000304494 PDGFRBP09619 1106 aa28.26■■■□□ 2.11
CDKN2A-201ENST00000304494 HMGA1P17096 107 aaKnown RBP28.26■■■□□ 2.11
CDKN2A-201ENST00000304494 MAGEA11P43364 429 aa28.26■■■□□ 2.11
CDKN2A-201ENST00000304494 GPR15P49685 360 aa28.26■■■□□ 2.11
CDKN2A-201ENST00000304494 PSMC1P62191 440 aaKnown RBP28.26■■■□□ 2.11
CDKN2A-201ENST00000304494 DLG4P78352 724 aa28.26■■■□□ 2.11
CDKN2A-201ENST00000304494 DDR2Q16832 855 aa28.26■■■□□ 2.11
CDKN2A-201ENST00000304494 ZNF699Q32M78 642 aa28.26■■■□□ 2.11
CDKN2A-201ENST00000304494 ARID3BQ8IVW6 561 aaPredicted RBP28.26■■■□□ 2.11
CDKN2A-201ENST00000304494 PJA1Q8NG27 643 aa28.26■■■□□ 2.11
CDKN2A-201ENST00000304494 GSDMAQ96QA5 445 aa28.26■■■□□ 2.11
CDKN2A-201ENST00000304494 MRPL45Q9BRJ2 306 aaKnown RBP28.26■■■□□ 2.11
CDKN2A-201ENST00000304494 MKNK1Q9BUB5 465 aa28.26■■■□□ 2.11
CDKN2A-201ENST00000304494 TRPV5Q9NQA5 729 aa28.26■■■□□ 2.11
CDKN2A-201ENST00000304494 UXTQ9UBK9 157 aaPredicted RBP28.26■■■□□ 2.11
CDKN2A-201ENST00000304494 HEPACAM2A8MVW5 462 aa28.25■■■□□ 2.11
CDKN2A-201ENST00000304494 DPYSL4O14531 572 aa28.25■■■□□ 2.11
CDKN2A-201ENST00000304494 SMC2O95347 1197 aa28.25■■■□□ 2.11
CDKN2A-201ENST00000304494 WEE1P30291 646 aa28.25■■■□□ 2.11
CDKN2A-201ENST00000304494 GDI1P31150 447 aa28.25■■■□□ 2.11
CDKN2A-201ENST00000304494 CYP4F8P98187 520 aa28.25■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms