RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 TWNKQ96RR1 684 aa12.71□□□□□ -0.37
TPM3-202ENST00000302206 KRT12Q99456 494 aa12.71□□□□□ -0.37
TPM3-202ENST00000302206 FUT8Q9BYC5 575 aa12.71□□□□□ -0.37
TPM3-202ENST00000302206 UNC93B1Q9H1C4 597 aa12.71□□□□□ -0.37
TPM3-202ENST00000302206 ERVK-5Q9HDB9 667 aa12.71□□□□□ -0.37
TPM3-202ENST00000302206 GDF3Q9NR23 364 aa12.71□□□□□ -0.37
TPM3-202ENST00000302206 SLC38A7Q9NVC3 462 aa12.71□□□□□ -0.37
TPM3-202ENST00000302206 OGFRQ9NZT2 677 aa12.71□□□□□ -0.37
TPM3-202ENST00000302206 PARP2Q9UGN5 583 aa12.71□□□□□ -0.37
TPM3-202ENST00000302206 CHORDC1Q9UHD1 332 aaPredicted RBP12.71□□□□□ -0.37
TPM3-202ENST00000302206 DMGDHQ9UI17 866 aaKnown RBP12.71□□□□□ -0.37
TPM3-202ENST00000302206 L1RE1Q9UN81 338 aa12.71□□□□□ -0.37
TPM3-202ENST00000302206 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.71□□□□□ -0.37
TPM3-202ENST00000302206 ALPK3Q96L96 1907 aa12.7□□□□□ -0.38
TPM3-202ENST00000302206 SIGLEC16A6NMB1 481 aa12.7□□□□□ -0.38
TPM3-202ENST00000302206 MAP2K7O14733 419 aa12.7□□□□□ -0.38
TPM3-202ENST00000302206 ZNF623O75123 536 aa12.7□□□□□ -0.38
TPM3-202ENST00000302206 MICAL2O94851 1124 aa12.7□□□□□ -0.38
TPM3-202ENST00000302206 TAF6P49848 677 aa12.7□□□□□ -0.38
TPM3-202ENST00000302206 ACLYP53396 1101 aa12.7□□□□□ -0.38
TPM3-202ENST00000302206 ITGA7Q13683 1181 aa12.7□□□□□ -0.38
TPM3-202ENST00000302206 TRIM71Q2Q1W2 868 aaKnown RBP12.7□□□□□ -0.38
TPM3-202ENST00000302206 FBXO47Q5MNV8 452 aa12.7□□□□□ -0.38
TPM3-202ENST00000302206 LRRC38Q5VT99 294 aa12.7□□□□□ -0.38
TPM3-202ENST00000302206 FAM43BQ6ZT52 329 aaPredicted RBP12.7□□□□□ -0.38
TPM3-202ENST00000302206 DPH6Q7L8W6 267 aa12.7□□□□□ -0.38
TPM3-202ENST00000302206 HDXQ7Z353 690 aa12.7□□□□□ -0.38
TPM3-202ENST00000302206 MAATS1Q7Z4T9 603 aa12.7□□□□□ -0.38
TPM3-202ENST00000302206 RHOT1Q8IXI2 618 aa12.7□□□□□ -0.38
TPM3-202ENST00000302206 NIPA2Q8N8Q9 360 aa12.7□□□□□ -0.38
TPM3-202ENST00000302206 CCDC26Q8TAB7 109 aa12.7□□□□□ -0.38
TPM3-202ENST00000302206 FNIP1Q8TF40 1166 aa12.7□□□□□ -0.38
TPM3-202ENST00000302206 WNT8BQ93098 351 aa12.7□□□□□ -0.38
TPM3-202ENST00000302206 HEXIM2Q96MH2 286 aaKnown RBP12.7□□□□□ -0.38
TPM3-202ENST00000302206 RUNDC3BQ96NL0 473 aa12.7□□□□□ -0.38
TPM3-202ENST00000302206 PPP1R10Q96QC0 940 aaKnown RBP12.7□□□□□ -0.38
TPM3-202ENST00000302206 APOL6Q9BWW8 343 aa12.7□□□□□ -0.38
TPM3-202ENST00000302206 SEZ6LQ9BYH1 1024 aa12.7□□□□□ -0.38
TPM3-202ENST00000302206 CXCL16Q9H2A7 254 aa12.7□□□□□ -0.38
TPM3-202ENST00000302206 FAM105AQ9NUU6 356 aa12.7□□□□□ -0.38
TPM3-202ENST00000302206 HMGXB4Q9UGU5 601 aa12.7□□□□□ -0.38
TPM3-202ENST00000302206 GIT1Q9Y2X7 761 aa12.7□□□□□ -0.38
TPM3-202ENST00000302206 SNX9Q9Y5X1 595 aa12.7□□□□□ -0.38
TPM3-202ENST00000302206 TRIP11Q15643 1979 aa12.69□□□□□ -0.38
TPM3-202ENST00000302206 FAM170AA1A519 330 aa12.69□□□□□ -0.38
TPM3-202ENST00000302206 PPEF2O14830 753 aa12.69□□□□□ -0.38
TPM3-202ENST00000302206 SEC31AO94979 1220 aaKnown RBP12.69□□□□□ -0.38
TPM3-202ENST00000302206 PYGMP11217 842 aa12.69□□□□□ -0.38
TPM3-202ENST00000302206 SKIP12755 728 aa12.69□□□□□ -0.38
TPM3-202ENST00000302206 ITGA4P13612 1032 aa12.69□□□□□ -0.38
TPM3-202ENST00000302206 PAX3P23760 479 aa12.69□□□□□ -0.38
TPM3-202ENST00000302206 SSTR3P32745 418 aaPredicted RBP12.69□□□□□ -0.38
TPM3-202ENST00000302206 BMP8BP34820 402 aa12.69□□□□□ -0.38
TPM3-202ENST00000302206 THPOP40225 353 aa12.69□□□□□ -0.38
TPM3-202ENST00000302206 GPD2P43304 727 aa12.69□□□□□ -0.38
TPM3-202ENST00000302206 MARCKSL1P49006 195 aa12.69□□□□□ -0.38
TPM3-202ENST00000302206 RNASE9P60153 205 aaKnown RBP12.69□□□□□ -0.38
TPM3-202ENST00000302206 NNTQ13423 1086 aa12.69□□□□□ -0.38
TPM3-202ENST00000302206 DHX34Q14147 1143 aaKnown RBP12.69□□□□□ -0.38
TPM3-202ENST00000302206 PIGHQ14442 188 aaPredicted RBP12.69□□□□□ -0.38
TPM3-202ENST00000302206 DSC3Q14574 896 aa12.69□□□□□ -0.38
TPM3-202ENST00000302206 CYP1B1Q16678 543 aa12.69□□□□□ -0.38
TPM3-202ENST00000302206 PTPN20Q4JDL3 420 aa12.69□□□□□ -0.38
TPM3-202ENST00000302206 GLRA4Q5JXX5 417 aa12.69□□□□□ -0.38
TPM3-202ENST00000302206 ARHGAP17Q68EM7 881 aa12.69□□□□□ -0.38
TPM3-202ENST00000302206 Q7L0L9 218 aa12.69□□□□□ -0.38
TPM3-202ENST00000302206 SLC13A5Q86YT5 568 aaPredicted RBP12.69□□□□□ -0.38
TPM3-202ENST00000302206 KATNAL2Q8IYT4 538 aa12.69□□□□□ -0.38
TPM3-202ENST00000302206 CRYBG2Q8N1P7 616 aa12.69□□□□□ -0.38
TPM3-202ENST00000302206 TMEM130Q8N3G9 435 aa12.69□□□□□ -0.38
TPM3-202ENST00000302206 SLC43A3Q8NBI5 491 aa12.69□□□□□ -0.38
TPM3-202ENST00000302206 AENQ8WTP8 325 aaKnown RBP12.69□□□□□ -0.38
TPM3-202ENST00000302206 HDAC7Q8WUI4 952 aa12.69□□□□□ -0.38
TPM3-202ENST00000302206 RNF25Q96BH1 459 aaPredicted RBP12.69□□□□□ -0.38
TPM3-202ENST00000302206 C18orf8Q96DM3 657 aa12.69□□□□□ -0.38
TPM3-202ENST00000302206 MCRS1Q96EZ8 462 aa12.69□□□□□ -0.38
TPM3-202ENST00000302206 MRPL45Q9BRJ2 306 aaKnown RBP12.69□□□□□ -0.38
TPM3-202ENST00000302206 VIPAS39Q9H9C1 493 aa12.69□□□□□ -0.38
TPM3-202ENST00000302206 MTUS1Q9ULD2 1270 aa12.69□□□□□ -0.38
TPM3-202ENST00000302206 A0A0U1RQG5 324 aaPredicted RBP12.68□□□□□ -0.38
TPM3-202ENST00000302206 FAM187AA6NFU0 413 aa12.68□□□□□ -0.38
TPM3-202ENST00000302206 KPNA7A9QM74 516 aa12.68□□□□□ -0.38
TPM3-202ENST00000302206 PTGESO14684 152 aa12.68□□□□□ -0.38
TPM3-202ENST00000302206 FSCN2O14926 492 aa12.68□□□□□ -0.38
TPM3-202ENST00000302206 SART1O43290 800 aaKnown RBP12.68□□□□□ -0.38
TPM3-202ENST00000302206 RAD51CO43502 376 aa12.68□□□□□ -0.38
TPM3-202ENST00000302206 PHF2O75151 1096 aa12.68□□□□□ -0.38
TPM3-202ENST00000302206 HEXIM1O94992 359 aaKnown RBP12.68□□□□□ -0.38
TPM3-202ENST00000302206 WARSP23381 471 aaKnown RBP12.68□□□□□ -0.38
TPM3-202ENST00000302206 CHRNA3P32297 505 aa12.68□□□□□ -0.38
TPM3-202ENST00000302206 SNX16P57768 344 aa12.68□□□□□ -0.38
TPM3-202ENST00000302206 PAK2Q13177 524 aa12.68□□□□□ -0.38
TPM3-202ENST00000302206 ZNF211Q13398 564 aaPredicted RBP12.68□□□□□ -0.38
TPM3-202ENST00000302206 CUL1Q13616 776 aa12.68□□□□□ -0.38
TPM3-202ENST00000302206 ACAP1Q15027 740 aa12.68□□□□□ -0.38
TPM3-202ENST00000302206 SOWAHAQ2M3V2 549 aa12.68□□□□□ -0.38
TPM3-202ENST00000302206 PKDCCQ504Y2 493 aa12.68□□□□□ -0.38
TPM3-202ENST00000302206 C2CD6Q53TS8 623 aa12.68□□□□□ -0.38
TPM3-202ENST00000302206 LLGL2Q6P1M3 1020 aa12.68□□□□□ -0.38
TPM3-202ENST00000302206 EMBQ6PCB8 327 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms