RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 GABRB2P47870 512 aa23.57■■□□□ 1.36
SMAD1-201ENST00000302085 CARSP49589 748 aaKnown RBP23.57■■□□□ 1.36
SMAD1-201ENST00000302085 TAF6P49848 677 aa23.57■■□□□ 1.36
SMAD1-201ENST00000302085 LIMS2Q7Z4I7 341 aa23.57■■□□□ 1.36
SMAD1-201ENST00000302085 UNC93AQ86WB7 457 aa23.57■■□□□ 1.36
SMAD1-201ENST00000302085 XYLT1Q86Y38 959 aa23.57■■□□□ 1.36
SMAD1-201ENST00000302085 PRELID2Q8N945 189 aa23.57■■□□□ 1.36
SMAD1-201ENST00000302085 OR6B3Q8NGW1 331 aa23.57■■□□□ 1.36
SMAD1-201ENST00000302085 KBTBD7Q8WVZ9 684 aa23.57■■□□□ 1.36
SMAD1-201ENST00000302085 TSPAN16Q9UKR8 245 aa23.57■■□□□ 1.36
SMAD1-201ENST00000302085 PADI3Q9ULW8 664 aa23.57■■□□□ 1.36
SMAD1-201ENST00000302085 INHAP05111 366 aa23.56■■□□□ 1.36
SMAD1-201ENST00000302085 FGFR1P11362 822 aa23.56■■□□□ 1.36
SMAD1-201ENST00000302085 LRPAP1P30533 357 aa23.56■■□□□ 1.36
SMAD1-201ENST00000302085 PDCLQ13371 301 aa23.56■■□□□ 1.36
SMAD1-201ENST00000302085 ZNF268Q14587 947 aaPredicted RBP23.56■■□□□ 1.36
SMAD1-201ENST00000302085 SIX1Q15475 284 aaPredicted RBP23.56■■□□□ 1.36
SMAD1-201ENST00000302085 PPP1R26Q5T8A7 1209 aaPredicted RBP23.56■■□□□ 1.36
SMAD1-201ENST00000302085 LHX8Q68G74 356 aa23.56■■□□□ 1.36
SMAD1-201ENST00000302085 RHOT1Q8IXI2 618 aa23.56■■□□□ 1.36
SMAD1-201ENST00000302085 CCDC26Q8TAB7 109 aa23.56■■□□□ 1.36
SMAD1-201ENST00000302085 LPPQ93052 612 aa23.56■■□□□ 1.36
SMAD1-201ENST00000302085 GDAP1L1Q96MZ0 367 aa23.56■■□□□ 1.36
SMAD1-201ENST00000302085 SBDSQ9Y3A5 250 aaKnown RBP eCLIP23.56■■□□□ 1.36
SMAD1-201ENST00000302085 F8VP50 259 aa23.56■■□□□ 1.36
SMAD1-201ENST00000302085 FSCN2O14926 492 aa23.56■■□□□ 1.36
SMAD1-201ENST00000302085 PSTPIP1O43586 416 aa23.56■■□□□ 1.36
SMAD1-201ENST00000302085 HCRTO43612 131 aa23.56■■□□□ 1.36
SMAD1-201ENST00000302085 GHRP10912 638 aa23.56■■□□□ 1.36
SMAD1-201ENST00000302085 RFC1P35251 1148 aaPredicted RBP23.56■■□□□ 1.36
SMAD1-201ENST00000302085 GSCP56915 257 aaPredicted RBP23.56■■□□□ 1.36
SMAD1-201ENST00000302085 LPIN1Q14693 890 aa23.56■■□□□ 1.36
SMAD1-201ENST00000302085 PPP2R5EQ16537 467 aa23.56■■□□□ 1.36
SMAD1-201ENST00000302085 KCTD19Q17RG1 926 aaPredicted RBP23.56■■□□□ 1.36
SMAD1-201ENST00000302085 GOLGA7BQ2TAP0 167 aa23.56■■□□□ 1.36
SMAD1-201ENST00000302085 FAM26DQ5JW98 314 aa23.56■■□□□ 1.36
SMAD1-201ENST00000302085 ZNF618Q5T7W0 954 aa23.56■■□□□ 1.36
SMAD1-201ENST00000302085 MRPL10Q7Z7H8 261 aaKnown RBP23.56■■□□□ 1.36
SMAD1-201ENST00000302085 IFT81Q8WYA0 676 aa23.56■■□□□ 1.36
SMAD1-201ENST00000302085 GAD1Q99259 594 aa23.56■■□□□ 1.36
SMAD1-201ENST00000302085 LPIN3Q9BQK8 851 aa23.56■■□□□ 1.36
SMAD1-201ENST00000302085 MIOSQ9NXC5 875 aa23.56■■□□□ 1.36
SMAD1-201ENST00000302085 WDR35Q9P2L0 1181 aa23.56■■□□□ 1.36
SMAD1-201ENST00000302085 TTI1O43156 1089 aa23.55■■□□□ 1.36
SMAD1-201ENST00000302085 MGEA5O60502 916 aa23.55■■□□□ 1.36
SMAD1-201ENST00000302085 RARAP10276 462 aa23.55■■□□□ 1.36
SMAD1-201ENST00000302085 KRT3P12035 628 aa23.55■■□□□ 1.36
SMAD1-201ENST00000302085 AFF1P51825 1210 aaKnown RBP23.55■■□□□ 1.36
SMAD1-201ENST00000302085 LILRA4P59901 499 aa23.55■■□□□ 1.36
SMAD1-201ENST00000302085 HTRA3P83110 453 aa23.55■■□□□ 1.36
SMAD1-201ENST00000302085 MAATS1Q7Z4T9 603 aa23.55■■□□□ 1.36
SMAD1-201ENST00000302085 KRT222Q8N1A0 295 aa23.55■■□□□ 1.36
SMAD1-201ENST00000302085 JOSD2Q8TAC2 188 aa23.55■■□□□ 1.36
SMAD1-201ENST00000302085 DPEP3Q9H4B8 488 aa23.55■■□□□ 1.36
SMAD1-201ENST00000302085 SYNCQ9H7C4 482 aa23.55■■□□□ 1.36
SMAD1-201ENST00000302085 LCMT1Q9UIC8 334 aa23.55■■□□□ 1.36
SMAD1-201ENST00000302085 NOD1Q9Y239 953 aa23.55■■□□□ 1.36
SMAD1-201ENST00000302085 PCNTO95613 3336 aa23.54■■□□□ 1.36
SMAD1-201ENST00000302085 A8MXQ7 604 aa23.54■■□□□ 1.36
SMAD1-201ENST00000302085 TCF4P15884 667 aa23.54■■□□□ 1.36
SMAD1-201ENST00000302085 IGFBP6P24592 240 aaPredicted RBP23.54■■□□□ 1.36
SMAD1-201ENST00000302085 GNL1P36915 607 aaPredicted RBP23.54■■□□□ 1.36
SMAD1-201ENST00000302085 MLH1P40692 756 aa23.54■■□□□ 1.36
SMAD1-201ENST00000302085 SSR1P43307 286 aaKnown RBP23.54■■□□□ 1.36
SMAD1-201ENST00000302085 TNNT3P45378 269 aaPredicted RBP23.54■■□□□ 1.36
SMAD1-201ENST00000302085 CBX1P83916 185 aa23.54■■□□□ 1.36
SMAD1-201ENST00000302085 DSC3Q14574 896 aa23.54■■□□□ 1.36
SMAD1-201ENST00000302085 LLGL1Q15334 1064 aa23.54■■□□□ 1.36
SMAD1-201ENST00000302085 STILQ15468 1287 aa23.54■■□□□ 1.36
SMAD1-201ENST00000302085 SV2CQ496J9 727 aa23.54■■□□□ 1.36
SMAD1-201ENST00000302085 PKDCCQ504Y2 493 aa23.54■■□□□ 1.36
SMAD1-201ENST00000302085 AGMOQ6ZNB7 445 aa23.54■■□□□ 1.36
SMAD1-201ENST00000302085 KATNAL2Q8IYT4 538 aa23.54■■□□□ 1.36
SMAD1-201ENST00000302085 MCRS1Q96EZ8 462 aa23.54■■□□□ 1.36
SMAD1-201ENST00000302085 FAM49BQ9NUQ9 324 aa23.54■■□□□ 1.36
SMAD1-201ENST00000302085 NFU1Q9UMS0 254 aa23.54■■□□□ 1.36
SMAD1-201ENST00000302085 FKTNO75072 461 aa23.54■■□□□ 1.36
SMAD1-201ENST00000302085 PHF2O75151 1096 aa23.54■■□□□ 1.36
SMAD1-201ENST00000302085 PDGFRBP09619 1106 aa23.54■■□□□ 1.36
SMAD1-201ENST00000302085 LMO2P25791 158 aa23.54■■□□□ 1.36
SMAD1-201ENST00000302085 PIGHQ14442 188 aaPredicted RBP23.54■■□□□ 1.36
SMAD1-201ENST00000302085 HACE1Q8IYU2 909 aa23.54■■□□□ 1.36
SMAD1-201ENST00000302085 NIPA2Q8N8Q9 360 aa23.54■■□□□ 1.36
SMAD1-201ENST00000302085 ZNF296Q8WUU4 475 aaPredicted RBP23.54■■□□□ 1.36
SMAD1-201ENST00000302085 HERPUD2Q9BSE4 406 aa23.54■■□□□ 1.36
SMAD1-201ENST00000302085 PLVAPQ9BX97 442 aa23.54■■□□□ 1.36
SMAD1-201ENST00000302085 MOXD2PA6NHM9 499 aa23.53■■□□□ 1.36
SMAD1-201ENST00000302085 PAK2Q13177 524 aa23.53■■□□□ 1.36
SMAD1-201ENST00000302085 TTC30AQ86WT1 665 aa23.53■■□□□ 1.36
SMAD1-201ENST00000302085 CRYBG2Q8N1P7 616 aa23.53■■□□□ 1.36
SMAD1-201ENST00000302085 APPL2Q8NEU8 664 aa23.53■■□□□ 1.36
SMAD1-201ENST00000302085 MAGOHBQ96A72 148 aaKnown RBP23.53■■□□□ 1.36
SMAD1-201ENST00000302085 TSEN34Q9BSV6 310 aaKnown RBP23.53■■□□□ 1.36
SMAD1-201ENST00000302085 UBXN6Q9BZV1 441 aa23.53■■□□□ 1.36
SMAD1-201ENST00000302085 EPHB4P54760 987 aa23.52■■□□□ 1.36
SMAD1-201ENST00000302085 CYP1B1Q16678 543 aa23.52■■□□□ 1.36
SMAD1-201ENST00000302085 ATP13A4Q4VNC1 1196 aa23.52■■□□□ 1.36
SMAD1-201ENST00000302085 ARHGAP17Q68EM7 881 aa23.52■■□□□ 1.36
SMAD1-201ENST00000302085 TTC27Q6P3X3 843 aa23.52■■□□□ 1.36
SMAD1-201ENST00000302085 SND1Q7KZF4 910 aaKnown RBP eCLIP23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms