RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 RASGEF1CQ8N431 466 aa24.19■■□□□ 1.46
PTX3-201ENST00000295927 CARD9Q9H257 536 aa24.19■■□□□ 1.46
PTX3-201ENST00000295927 FAM49BQ9NUQ9 324 aa24.19■■□□□ 1.46
PTX3-201ENST00000295927 CASTOR2A6NHX0 329 aa24.18■■□□□ 1.46
PTX3-201ENST00000295927 RPL9P32969 192 aaKnown RBP24.18■■□□□ 1.46
PTX3-201ENST00000295927 PEX5P50542 639 aa24.18■■□□□ 1.46
PTX3-201ENST00000295927 SLC24A5Q71RS6 500 aa24.18■■□□□ 1.46
PTX3-201ENST00000295927 CRYBG2Q8N1P7 616 aa24.18■■□□□ 1.46
PTX3-201ENST00000295927 MMGT1Q8N4V1 131 aa24.18■■□□□ 1.46
PTX3-201ENST00000295927 C18orf8Q96DM3 657 aa24.18■■□□□ 1.46
PTX3-201ENST00000295927 LPIN3Q9BQK8 851 aa24.18■■□□□ 1.46
PTX3-201ENST00000295927 INPP5FQ9Y2H2 1132 aa24.18■■□□□ 1.46
PTX3-201ENST00000295927 PROSCO94903 275 aa24.18■■□□□ 1.46
PTX3-201ENST00000295927 WARSP23381 471 aaKnown RBP24.18■■□□□ 1.46
PTX3-201ENST00000295927 CTNNA2P26232 953 aa24.18■■□□□ 1.46
PTX3-201ENST00000295927 CTNNA1P35221 906 aaKnown RBP24.18■■□□□ 1.46
PTX3-201ENST00000295927 RPL7AP62424 266 aaKnown RBP24.18■■□□□ 1.46
PTX3-201ENST00000295927 RBM10P98175 930 aaKnown RBP24.18■■□□□ 1.46
PTX3-201ENST00000295927 GRIK3Q13003 919 aa24.18■■□□□ 1.46
PTX3-201ENST00000295927 PDCLQ13371 301 aa24.18■■□□□ 1.46
PTX3-201ENST00000295927 PPP1R15BQ5SWA1 713 aa24.18■■□□□ 1.46
PTX3-201ENST00000295927 OSTM1Q86WC4 334 aa24.18■■□□□ 1.46
PTX3-201ENST00000295927 MSANTD4Q8NCY6 345 aa24.18■■□□□ 1.46
PTX3-201ENST00000295927 C3orf20Q8ND61 904 aa24.18■■□□□ 1.46
PTX3-201ENST00000295927 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.18■■□□□ 1.46
PTX3-201ENST00000295927 PAAF1Q9BRP4 392 aa24.18■■□□□ 1.46
PTX3-201ENST00000295927 RBM12Q9NTZ6 932 aaKnown RBP24.18■■□□□ 1.46
PTX3-201ENST00000295927 PCDHA3Q9Y5H8 950 aa24.18■■□□□ 1.46
PTX3-201ENST00000295927 TMEM191CA6NGB0 347 aa24.17■■□□□ 1.46
PTX3-201ENST00000295927 PGRMC1O00264 195 aaKnown RBP24.17■■□□□ 1.46
PTX3-201ENST00000295927 PQBP1O60828 265 aaKnown RBP24.17■■□□□ 1.46
PTX3-201ENST00000295927 NBNO60934 754 aa24.17■■□□□ 1.46
PTX3-201ENST00000295927 ERBB2P04626 1255 aa24.17■■□□□ 1.46
PTX3-201ENST00000295927 PFKMP08237 780 aa24.17■■□□□ 1.46
PTX3-201ENST00000295927 SLC1A1P43005 524 aa24.17■■□□□ 1.46
PTX3-201ENST00000295927 UPP1Q16831 310 aa24.17■■□□□ 1.46
PTX3-201ENST00000295927 ARHGAP17Q68EM7 881 aa24.17■■□□□ 1.46
PTX3-201ENST00000295927 C3orf58Q8NDZ4 430 aa24.17■■□□□ 1.46
PTX3-201ENST00000295927 SENP8Q96LD8 212 aa24.17■■□□□ 1.46
PTX3-201ENST00000295927 PARD6BQ9BYG5 372 aa24.17■■□□□ 1.46
PTX3-201ENST00000295927 SYNCQ9H7C4 482 aa24.17■■□□□ 1.46
PTX3-201ENST00000295927 RNF216Q9NWF9 866 aaPredicted RBP24.17■■□□□ 1.46
PTX3-201ENST00000295927 CCDC66A2RUB6 948 aa24.16■■□□□ 1.46
PTX3-201ENST00000295927 EOMESO95936 686 aa24.16■■□□□ 1.46
PTX3-201ENST00000295927 ATN1P54259 1190 aaPredicted RBP24.16■■□□□ 1.46
PTX3-201ENST00000295927 PSMC1P62191 440 aaKnown RBP24.16■■□□□ 1.46
PTX3-201ENST00000295927 FAM189BP81408 668 aa24.16■■□□□ 1.46
PTX3-201ENST00000295927 GPNMBQ14956 572 aa24.16■■□□□ 1.46
PTX3-201ENST00000295927 PKDCCQ504Y2 493 aa24.16■■□□□ 1.46
PTX3-201ENST00000295927 WSCD1Q658N2 575 aa24.16■■□□□ 1.46
PTX3-201ENST00000295927 TTC30AQ86WT1 665 aa24.16■■□□□ 1.46
PTX3-201ENST00000295927 MCEEQ96PE7 176 aa24.16■■□□□ 1.46
PTX3-201ENST00000295927 FTHL17Q9BXU8 183 aa24.16■■□□□ 1.46
PTX3-201ENST00000295927 INPPL1O15357 1258 aa24.16■■□□□ 1.46
PTX3-201ENST00000295927 FAM163BP0C2L3 166 aa24.16■■□□□ 1.46
PTX3-201ENST00000295927 H2AFXP16104 143 aaPredicted RBP24.16■■□□□ 1.46
PTX3-201ENST00000295927 GABRB2P47870 512 aa24.16■■□□□ 1.46
PTX3-201ENST00000295927 TAP1Q03518 808 aa24.16■■□□□ 1.46
PTX3-201ENST00000295927 ZNF211Q13398 564 aaPredicted RBP24.16■■□□□ 1.46
PTX3-201ENST00000295927 DCUN1D2Q6PH85 259 aa24.16■■□□□ 1.46
PTX3-201ENST00000295927 FBXO38Q6PIJ6 1188 aa24.16■■□□□ 1.46
PTX3-201ENST00000295927 XYLT1Q86Y38 959 aa24.16■■□□□ 1.46
PTX3-201ENST00000295927 RNPC3Q96LT9 517 aaKnown RBP24.16■■□□□ 1.46
PTX3-201ENST00000295927 DNAI2Q9GZS0 605 aa24.16■■□□□ 1.46
PTX3-201ENST00000295927 TTC7AQ9ULT0 858 aaPredicted RBP24.16■■□□□ 1.46
PTX3-201ENST00000295927 GOLGA8SH3BPF8 625 aa24.15■■□□□ 1.46
PTX3-201ENST00000295927 PITPNM1O00562 1244 aa24.15■■□□□ 1.46
PTX3-201ENST00000295927 MNX1P50219 401 aaPredicted RBP24.15■■□□□ 1.46
PTX3-201ENST00000295927 GSCP56915 257 aaPredicted RBP24.15■■□□□ 1.46
PTX3-201ENST00000295927 CRISPLD2Q9H0B8 497 aa24.15■■□□□ 1.46
PTX3-201ENST00000295927 WDR35Q9P2L0 1181 aa24.15■■□□□ 1.46
PTX3-201ENST00000295927 IP6K2Q9UHH9 426 aa24.15■■□□□ 1.46
PTX3-201ENST00000295927 CCDC130P13994 396 aa24.14■■□□□ 1.46
PTX3-201ENST00000295927 TUSC3Q13454 348 aa24.14■■□□□ 1.46
PTX3-201ENST00000295927 ZNF268Q14587 947 aaPredicted RBP24.14■■□□□ 1.46
PTX3-201ENST00000295927 GADD45GIP1Q8TAE8 222 aaPredicted RBP24.14■■□□□ 1.46
PTX3-201ENST00000295927 DDX27Q96GQ7 796 aaKnown RBP24.14■■□□□ 1.46
PTX3-201ENST00000295927 TNIP3Q96KP6 325 aa24.14■■□□□ 1.46
PTX3-201ENST00000295927 PNKPQ96T60 521 aa24.14■■□□□ 1.46
PTX3-201ENST00000295927 ST7Q9NRC1 585 aa24.14■■□□□ 1.46
PTX3-201ENST00000295927 HESX1Q9UBX0 185 aa24.14■■□□□ 1.46
PTX3-201ENST00000295927 TMEM59LQ9UK28 342 aa24.14■■□□□ 1.46
PTX3-201ENST00000295927 SIGLEC16A6NMB1 481 aa24.14■■□□□ 1.45
PTX3-201ENST00000295927 GABRDO14764 452 aa24.14■■□□□ 1.45
PTX3-201ENST00000295927 PLEKHG4Q58EX7 1191 aa24.14■■□□□ 1.45
PTX3-201ENST00000295927 DAB2IPQ5VWQ8 1189 aa24.14■■□□□ 1.45
PTX3-201ENST00000295927 GLB1LQ6UWU2 654 aa24.14■■□□□ 1.45
PTX3-201ENST00000295927 DSTYKQ6XUX3 929 aa24.14■■□□□ 1.45
PTX3-201ENST00000295927 SLC39A5Q6ZMH5 540 aa24.14■■□□□ 1.45
PTX3-201ENST00000295927 DBF4BQ8NFT6 615 aa24.14■■□□□ 1.45
PTX3-201ENST00000295927 TULP2O00295 520 aa24.13■■□□□ 1.45
PTX3-201ENST00000295927 FGGP02679 453 aa24.13■■□□□ 1.45
PTX3-201ENST00000295927 MAN1A1P33908 653 aa24.13■■□□□ 1.45
PTX3-201ENST00000295927 AARSP49588 968 aaKnown RBP eCLIP24.13■■□□□ 1.45
PTX3-201ENST00000295927 ZNF252P-AS1Q0IIN9 211 aa24.13■■□□□ 1.45
PTX3-201ENST00000295927 AADACL2Q6P093 401 aa24.13■■□□□ 1.45
PTX3-201ENST00000295927 B3GALNT2Q8NCR0 500 aa24.13■■□□□ 1.45
PTX3-201ENST00000295927 IPO4Q8TEX9 1081 aaKnown RBP24.13■■□□□ 1.45
PTX3-201ENST00000295927 SCN5AQ14524 2016 aa24.13■■□□□ 1.45
PTX3-201ENST00000295927 SETSIPP0DME0 302 aa24.12■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms