RNA–Protein interactions for RNA: ENST00000291842.9

SHKBP1-201, Transcript of SH3KBP1 binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHKBP1, Length 2,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-201ENST00000291842 INSRRP14616 1297 aa19.36■□□□□ 0.69
SHKBP1-201ENST00000291842 CDKN2BP42772 138 aa19.36■□□□□ 0.69
SHKBP1-201ENST00000291842 RAD23BP54727 409 aa19.36■□□□□ 0.69
SHKBP1-201ENST00000291842 PSMC1P62191 440 aaKnown RBP19.36■□□□□ 0.69
SHKBP1-201ENST00000291842 VSTM1Q6UX27 236 aa19.36■□□□□ 0.69
SHKBP1-201ENST00000291842 EXOC8Q8IYI6 725 aa19.36■□□□□ 0.69
SHKBP1-201ENST00000291842 ARFGAP1Q8N6T3 406 aa19.36■□□□□ 0.69
SHKBP1-201ENST00000291842 DYDC1Q8WWB3 177 aa19.36■□□□□ 0.69
SHKBP1-201ENST00000291842 CDCA5Q96FF9 252 aa19.36■□□□□ 0.69
SHKBP1-201ENST00000291842 ELAC2Q9BQ52 826 aaKnown RBP19.36■□□□□ 0.69
SHKBP1-201ENST00000291842 FDXACB1Q9BRP7 624 aaPredicted RBP19.36■□□□□ 0.69
SHKBP1-201ENST00000291842 SAYSD1Q9NPB0 183 aa19.36■□□□□ 0.69
SHKBP1-201ENST00000291842 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.36■□□□□ 0.69
SHKBP1-201ENST00000291842 C22orf31O95567 290 aa19.35■□□□□ 0.69
SHKBP1-201ENST00000291842 VTNP04004 478 aa19.35■□□□□ 0.69
SHKBP1-201ENST00000291842 STAG3L1P0CL83 205 aa19.35■□□□□ 0.69
SHKBP1-201ENST00000291842 IL1R2P27930 398 aa19.35■□□□□ 0.69
SHKBP1-201ENST00000291842 CDH5P33151 784 aaPredicted RBP19.35■□□□□ 0.69
SHKBP1-201ENST00000291842 MAGEA4P43358 317 aa19.35■□□□□ 0.69
SHKBP1-201ENST00000291842 FASTKD3Q14CZ7 662 aaKnown RBP19.35■□□□□ 0.69
SHKBP1-201ENST00000291842 EAPPQ56P03 285 aaPredicted RBP19.35■□□□□ 0.69
SHKBP1-201ENST00000291842 ARMC9Q7Z3E5 817 aa19.35■□□□□ 0.69
SHKBP1-201ENST00000291842 BBOF1Q8ND07 529 aa19.35■□□□□ 0.69
SHKBP1-201ENST00000291842 SYNCQ9H7C4 482 aa19.35■□□□□ 0.69
SHKBP1-201ENST00000291842 TNFSF13BQ9Y275 285 aa19.35■□□□□ 0.69
SHKBP1-201ENST00000291842 SGK1O00141 431 aa19.35■□□□□ 0.69
SHKBP1-201ENST00000291842 DNM1LO00429 736 aa19.35■□□□□ 0.69
SHKBP1-201ENST00000291842 FSBPO95073 299 aa19.35■□□□□ 0.69
SHKBP1-201ENST00000291842 GH1P01241 217 aa19.35■□□□□ 0.69
SHKBP1-201ENST00000291842 MPP2Q14168 576 aa19.35■□□□□ 0.69
SHKBP1-201ENST00000291842 TTLL4Q14679 1199 aa19.35■□□□□ 0.69
SHKBP1-201ENST00000291842 LRRC38Q5VT99 294 aa19.35■□□□□ 0.69
SHKBP1-201ENST00000291842 CCDC13Q8IYE1 715 aa19.35■□□□□ 0.69
SHKBP1-201ENST00000291842 TAB3Q8N5C8 712 aaPredicted RBP19.35■□□□□ 0.69
SHKBP1-201ENST00000291842 ALLCQ8N6M5 410 aa19.35■□□□□ 0.69
SHKBP1-201ENST00000291842 GDAP1Q8TB36 358 aa19.35■□□□□ 0.69
SHKBP1-201ENST00000291842 NAALADL1Q9UQQ1 740 aa19.35■□□□□ 0.69
SHKBP1-201ENST00000291842 ANK1P16157 1881 aa19.34■□□□□ 0.69
SHKBP1-201ENST00000291842 PIK3R2O00459 728 aa19.34■□□□□ 0.69
SHKBP1-201ENST00000291842 DNALI1O14645 258 aaPredicted RBP19.34■□□□□ 0.69
SHKBP1-201ENST00000291842 PECAM1P16284 738 aaPredicted RBP19.34■□□□□ 0.69
SHKBP1-201ENST00000291842 YWHAEP62258 255 aaKnown RBP19.34■□□□□ 0.69
SHKBP1-201ENST00000291842 LMNB2Q03252 620 aa19.34■□□□□ 0.69
SHKBP1-201ENST00000291842 ACTN3Q08043 901 aaPredicted RBP19.34■□□□□ 0.69
SHKBP1-201ENST00000291842 SRRM1Q8IYB3 904 aaKnown RBP19.34■□□□□ 0.69
SHKBP1-201ENST00000291842 ZCCHC9Q8N567 271 aaKnown RBP19.34■□□□□ 0.69
SHKBP1-201ENST00000291842 METTL5Q9NRN9 209 aaKnown RBP19.34■□□□□ 0.69
SHKBP1-201ENST00000291842 ERAP1Q9NZ08 941 aa19.34■□□□□ 0.69
SHKBP1-201ENST00000291842 PCSK1NQ9UHG2 260 aa19.34■□□□□ 0.69
SHKBP1-201ENST00000291842 AKT3Q9Y243 479 aa19.34■□□□□ 0.69
SHKBP1-201ENST00000291842 GOLGA8MH3BSY2 632 aa19.34■□□□□ 0.69
SHKBP1-201ENST00000291842 LRCH4O75427 683 aa19.34■□□□□ 0.69
SHKBP1-201ENST00000291842 ERBB2P04626 1255 aa19.34■□□□□ 0.69
SHKBP1-201ENST00000291842 ZNF286BP0CG31 522 aa19.34■□□□□ 0.69
SHKBP1-201ENST00000291842 BRAFP15056 766 aa19.34■□□□□ 0.69
SHKBP1-201ENST00000291842 ARMCX2Q7L311 632 aa19.34■□□□□ 0.69
SHKBP1-201ENST00000291842 CCDC197Q8NCU1 140 aa19.34■□□□□ 0.69
SHKBP1-201ENST00000291842 ELOVL4Q9GZR5 314 aa19.34■□□□□ 0.69
SHKBP1-201ENST00000291842 KCNH4Q9UQ05 1017 aa19.34■□□□□ 0.69
SHKBP1-201ENST00000291842 DICER1Q9UPY3 1922 aaKnown RBP19.33■□□□□ 0.69
SHKBP1-201ENST00000291842 BANF1O75531 89 aa19.33■□□□□ 0.69
SHKBP1-201ENST00000291842 CD48P09326 243 aa19.33■□□□□ 0.69
SHKBP1-201ENST00000291842 OSBPP22059 807 aa19.33■□□□□ 0.69
SHKBP1-201ENST00000291842 TAP1Q03518 808 aa19.33■□□□□ 0.69
SHKBP1-201ENST00000291842 TAF5Q15542 800 aa19.33■□□□□ 0.69
SHKBP1-201ENST00000291842 FAM182AQ5T1J6 154 aa19.33■□□□□ 0.69
SHKBP1-201ENST00000291842 SLC4A11Q8NBS3 891 aa19.33■□□□□ 0.69
SHKBP1-201ENST00000291842 BCO2Q9BYV7 579 aa19.33■□□□□ 0.69
SHKBP1-201ENST00000291842 C3orf70A6NLC5 250 aaPredicted RBP19.33■□□□□ 0.68
SHKBP1-201ENST00000291842 SIGLEC16A6NMB1 481 aa19.33■□□□□ 0.68
SHKBP1-201ENST00000291842 POLR2BP30876 1174 aaKnown RBP19.33■□□□□ 0.68
SHKBP1-201ENST00000291842 SLC26A2P50443 739 aa19.33■□□□□ 0.68
SHKBP1-201ENST00000291842 VCPP55072 806 aaKnown RBP19.33■□□□□ 0.68
SHKBP1-201ENST00000291842 OASLQ15646 514 aaKnown RBP19.33■□□□□ 0.68
SHKBP1-201ENST00000291842 ANKRD20A8PQ5CZ79 823 aa19.33■□□□□ 0.68
SHKBP1-201ENST00000291842 NIPA2Q8N8Q9 360 aa19.33■□□□□ 0.68
SHKBP1-201ENST00000291842 MRRFQ96E11 262 aaKnown RBP19.33■□□□□ 0.68
SHKBP1-201ENST00000291842 DDX56Q9NY93 547 aaKnown RBP19.33■□□□□ 0.68
SHKBP1-201ENST00000291842 STRIP2Q9ULQ0 834 aa19.33■□□□□ 0.68
SHKBP1-201ENST00000291842 TPX2Q9ULW0 747 aaKnown RBP19.33■□□□□ 0.68
SHKBP1-201ENST00000291842 TCP11X1B4DZS4 312 aa19.32■□□□□ 0.68
SHKBP1-201ENST00000291842 MED7O43513 233 aa19.32■□□□□ 0.68
SHKBP1-201ENST00000291842 IL18RAPO95256 599 aa19.32■□□□□ 0.68
SHKBP1-201ENST00000291842 LGALS2P05162 132 aa19.32■□□□□ 0.68
SHKBP1-201ENST00000291842 COPS2P61201 443 aa19.32■□□□□ 0.68
SHKBP1-201ENST00000291842 SLC25A11Q02978 314 aaKnown RBP19.32■□□□□ 0.68
SHKBP1-201ENST00000291842 ARHGAP1Q07960 439 aa19.32■□□□□ 0.68
SHKBP1-201ENST00000291842 PPIL2Q13356 520 aa19.32■□□□□ 0.68
SHKBP1-201ENST00000291842 MTM1Q13496 603 aa19.32■□□□□ 0.68
SHKBP1-201ENST00000291842 TMED2Q15363 201 aa19.32■□□□□ 0.68
SHKBP1-201ENST00000291842 XYLT1Q86Y38 959 aa19.32■□□□□ 0.68
SHKBP1-201ENST00000291842 UBA3Q8TBC4 463 aa19.32■□□□□ 0.68
SHKBP1-201ENST00000291842 ADAM33Q9BZ11 813 aa19.32■□□□□ 0.68
SHKBP1-201ENST00000291842 CST8O60676 142 aa19.32■□□□□ 0.68
SHKBP1-201ENST00000291842 ATP5DP30049 168 aa19.32■□□□□ 0.68
SHKBP1-201ENST00000291842 PHKA2P46019 1235 aa19.32■□□□□ 0.68
SHKBP1-201ENST00000291842 GDF10P55107 478 aa19.32■□□□□ 0.68
SHKBP1-201ENST00000291842 GAD2Q05329 585 aa19.32■□□□□ 0.68
SHKBP1-201ENST00000291842 AMHR2Q16671 573 aa19.32■□□□□ 0.68
SHKBP1-201ENST00000291842 PIGWQ7Z7B1 504 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms