RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 TTLL13PA6NNM8 815 aa19.35■□□□□ 0.69
PCDH1-201ENST00000287008 SPAG6O75602 509 aa19.35■□□□□ 0.69
PCDH1-201ENST00000287008 POLBP06746 335 aa19.35■□□□□ 0.69
PCDH1-201ENST00000287008 KCNA4P22459 653 aa19.35■□□□□ 0.69
PCDH1-201ENST00000287008 SPRP35270 261 aaPredicted RBP19.35■□□□□ 0.69
PCDH1-201ENST00000287008 KLK7P49862 253 aa19.35■□□□□ 0.69
PCDH1-201ENST00000287008 POLD3Q15054 466 aaPredicted RBP19.35■□□□□ 0.69
PCDH1-201ENST00000287008 COG1Q8WTW3 980 aa19.35■□□□□ 0.69
PCDH1-201ENST00000287008 TRABDQ9H4I3 376 aa19.35■□□□□ 0.69
PCDH1-201ENST00000287008 EML4Q9HC35 981 aaKnown RBP19.35■□□□□ 0.69
PCDH1-201ENST00000287008 OLFML3Q9NRN5 406 aa19.35■□□□□ 0.69
PCDH1-201ENST00000287008 PKP3Q9Y446 797 aa19.35■□□□□ 0.69
PCDH1-201ENST00000287008 ZNF185O15231 689 aa19.34■□□□□ 0.69
PCDH1-201ENST00000287008 SPAG7O75391 227 aa19.34■□□□□ 0.69
PCDH1-201ENST00000287008 ATP5HO75947 161 aa19.34■□□□□ 0.69
PCDH1-201ENST00000287008 PPIL2Q13356 520 aa19.34■□□□□ 0.69
PCDH1-201ENST00000287008 ACVR2BQ13705 512 aa19.34■□□□□ 0.69
PCDH1-201ENST00000287008 E4F1Q66K89 784 aaPredicted RBP19.34■□□□□ 0.69
PCDH1-201ENST00000287008 IQSEC1Q6DN90 963 aa19.34■□□□□ 0.69
PCDH1-201ENST00000287008 CYP2W1Q8TAV3 490 aa19.34■□□□□ 0.69
PCDH1-201ENST00000287008 CINPQ9BW66 212 aaPredicted RBP19.34■□□□□ 0.69
PCDH1-201ENST00000287008 TMEM39AQ9NV64 488 aa19.34■□□□□ 0.69
PCDH1-201ENST00000287008 AVPR1AP37288 418 aa19.34■□□□□ 0.69
PCDH1-201ENST00000287008 PKN1Q16512 942 aa19.34■□□□□ 0.69
PCDH1-201ENST00000287008 RABGAP1LQ5R372 815 aa19.34■□□□□ 0.69
PCDH1-201ENST00000287008 TAS1R2Q8TE23 839 aa19.34■□□□□ 0.69
PCDH1-201ENST00000287008 HASPINQ8TF76 798 aa19.34■□□□□ 0.69
PCDH1-201ENST00000287008 ATP6V1G3Q96LB4 118 aa19.34■□□□□ 0.69
PCDH1-201ENST00000287008 SLC4A9Q96Q91 983 aa19.34■□□□□ 0.69
PCDH1-201ENST00000287008 ANXA9O76027 345 aa19.34■□□□□ 0.69
PCDH1-201ENST00000287008 PON1P27169 355 aa19.34■□□□□ 0.69
PCDH1-201ENST00000287008 ORC1Q13415 861 aa19.34■□□□□ 0.69
PCDH1-201ENST00000287008 LRRC14Q15048 493 aa19.34■□□□□ 0.69
PCDH1-201ENST00000287008 SYNPO2Q9UMS6 1093 aa19.34■□□□□ 0.69
PCDH1-201ENST00000287008 ASS1P00966 412 aaKnown RBP19.33■□□□□ 0.69
PCDH1-201ENST00000287008 SERPIND1P05546 499 aa19.33■□□□□ 0.69
PCDH1-201ENST00000287008 STMN1P16949 149 aa19.33■□□□□ 0.69
PCDH1-201ENST00000287008 ANKS3Q6ZW76 656 aa19.33■□□□□ 0.69
PCDH1-201ENST00000287008 AGR3Q8TD06 166 aa19.33■□□□□ 0.69
PCDH1-201ENST00000287008 MRPL46Q9H2W6 279 aaKnown RBP19.33■□□□□ 0.69
PCDH1-201ENST00000287008 ADAM21Q9UKJ8 722 aa19.33■□□□□ 0.69
PCDH1-201ENST00000287008 CHMP2BQ9UQN3 213 aa19.33■□□□□ 0.69
PCDH1-201ENST00000287008 GOLGA8RI6L899 631 aa19.33■□□□□ 0.69
PCDH1-201ENST00000287008 CXCL8P10145 99 aa19.33■□□□□ 0.69
PCDH1-201ENST00000287008 TRADDQ15628 312 aa19.33■□□□□ 0.69
PCDH1-201ENST00000287008 SV2AQ7L0J3 742 aa19.33■□□□□ 0.69
PCDH1-201ENST00000287008 ZNF518BQ9C0D4 1074 aa19.33■□□□□ 0.69
PCDH1-201ENST00000287008 C20orf96Q9NUD7 363 aaPredicted RBP19.33■□□□□ 0.69
PCDH1-201ENST00000287008 NSMCE4AQ9NXX6 385 aa19.33■□□□□ 0.69
PCDH1-201ENST00000287008 STIP1P31948 543 aaKnown RBP19.33■□□□□ 0.68
PCDH1-201ENST00000287008 EPHB3P54753 998 aa19.33■□□□□ 0.68
PCDH1-201ENST00000287008 FBXW4P57775 412 aa19.33■□□□□ 0.68
PCDH1-201ENST00000287008 MYL6P60660 151 aa19.33■□□□□ 0.68
PCDH1-201ENST00000287008 BTG3Q14201 252 aaPredicted RBP19.33■□□□□ 0.68
PCDH1-201ENST00000287008 MFSD10Q14728 455 aa19.33■□□□□ 0.68
PCDH1-201ENST00000287008 FSCN1Q16658 493 aaKnown RBP19.33■□□□□ 0.68
PCDH1-201ENST00000287008 ZFPM1Q8IX07 1006 aa19.33■□□□□ 0.68
PCDH1-201ENST00000287008 CARD9Q9H257 536 aa19.33■□□□□ 0.68
PCDH1-201ENST00000287008 RRP15Q9Y3B9 282 aaKnown RBP19.33■□□□□ 0.68
PCDH1-201ENST00000287008 SYNDIG1LA6NDD5 238 aa19.33■□□□□ 0.68
PCDH1-201ENST00000287008 CASTOR2A6NHX0 329 aa19.33■□□□□ 0.68
PCDH1-201ENST00000287008 PMPCBO75439 489 aa19.33■□□□□ 0.68
PCDH1-201ENST00000287008 VCPP55072 806 aaKnown RBP19.33■□□□□ 0.68
PCDH1-201ENST00000287008 CYP24A1Q07973 514 aa19.33■□□□□ 0.68
PCDH1-201ENST00000287008 BEND6Q5SZJ8 279 aaPredicted RBP19.33■□□□□ 0.68
PCDH1-201ENST00000287008 CHORDC1Q9UHD1 332 aaPredicted RBP19.33■□□□□ 0.68
PCDH1-201ENST00000287008 BAZ2BQ9UIF8 2168 aaKnown RBP19.32■□□□□ 0.68
PCDH1-201ENST00000287008 GMNCA6NCL1 334 aa19.32■□□□□ 0.68
PCDH1-201ENST00000287008 FBXO21O94952 628 aa19.32■□□□□ 0.68
PCDH1-201ENST00000287008 MCF2P10911 925 aa19.32■□□□□ 0.68
PCDH1-201ENST00000287008 DNAJB2P25686 324 aa19.32■□□□□ 0.68
PCDH1-201ENST00000287008 KCNJ1P48048 391 aa19.32■□□□□ 0.68
PCDH1-201ENST00000287008 SFSWAPQ12872 951 aaKnown RBP19.32■□□□□ 0.68
PCDH1-201ENST00000287008 CENPPQ6IPU0 288 aa19.32■□□□□ 0.68
PCDH1-201ENST00000287008 JAMLQ86YT9 394 aa19.32■□□□□ 0.68
PCDH1-201ENST00000287008 FAM118BQ9BPY3 351 aa19.32■□□□□ 0.68
PCDH1-201ENST00000287008 FRMD8Q9BZ67 464 aaPredicted RBP19.32■□□□□ 0.68
PCDH1-201ENST00000287008 CRLS1Q9UJA2 301 aa19.32■□□□□ 0.68
PCDH1-201ENST00000287008 VWDEQ8N2E2 1590 aa19.32■□□□□ 0.68
PCDH1-201ENST00000287008 ZNF200P98182 395 aaPredicted RBP19.32■□□□□ 0.68
PCDH1-201ENST00000287008 MAPRE2Q15555 327 aa19.32■□□□□ 0.68
PCDH1-201ENST00000287008 C15orf52Q6ZUT6 534 aaKnown RBP19.32■□□□□ 0.68
PCDH1-201ENST00000287008 TEKT4Q8WW24 435 aa19.32■□□□□ 0.68
PCDH1-201ENST00000287008 ZNF669Q96BR6 464 aaPredicted RBP19.32■□□□□ 0.68
PCDH1-201ENST00000287008 ADA2Q9NZK5 511 aa19.32■□□□□ 0.68
PCDH1-201ENST00000287008 THEGQ9P2T0 379 aa19.32■□□□□ 0.68
PCDH1-201ENST00000287008 TRIM10Q9UDY6 481 aa19.32■□□□□ 0.68
PCDH1-201ENST00000287008 AARSP49588 968 aaKnown RBP eCLIP19.32■□□□□ 0.68
PCDH1-201ENST00000287008 CCZ1BP86790 482 aa19.32■□□□□ 0.68
PCDH1-201ENST00000287008 CCZ1P86791 482 aaPredicted RBP19.32■□□□□ 0.68
PCDH1-201ENST00000287008 CENPCQ03188 943 aa19.32■□□□□ 0.68
PCDH1-201ENST00000287008 PTPN11Q06124 597 aaPredicted RBP19.32■□□□□ 0.68
PCDH1-201ENST00000287008 OVOS1Q6IE37 1185 aa19.32■□□□□ 0.68
PCDH1-201ENST00000287008 RUBCNQ92622 972 aa19.32■□□□□ 0.68
PCDH1-201ENST00000287008 TEX12Q9BXU0 123 aa19.32■□□□□ 0.68
PCDH1-201ENST00000287008 GOLPH3Q9H4A6 298 aa19.32■□□□□ 0.68
PCDH1-201ENST00000287008 SMYD3Q9H7B4 428 aa19.32■□□□□ 0.68
PCDH1-201ENST00000287008 CISHQ9NSE2 258 aa19.32■□□□□ 0.68
PCDH1-201ENST00000287008 CCDC22O60826 627 aa19.32■□□□□ 0.68
PCDH1-201ENST00000287008 TAL1P17542 331 aaPredicted RBP19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms