RNA–Protein interactions for RNA: ENST00000273286.5

LRTM1-201, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRTM1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-201ENST00000273286 IGSF21Q96ID5 467 aa10.77□□□□□ -0.68
LRTM1-201ENST00000273286 NCOA5Q9HCD5 579 aaKnown RBP10.77□□□□□ -0.68
LRTM1-201ENST00000273286 CYP26B1Q9NR63 512 aa10.77□□□□□ -0.68
LRTM1-201ENST00000273286 TBC1D13Q9NVG8 400 aa10.77□□□□□ -0.68
LRTM1-201ENST00000273286 SSX2IPQ9Y2D8 614 aa10.77□□□□□ -0.68
LRTM1-201ENST00000273286 CCDC194A0A1B0GVG4 234 aa10.76□□□□□ -0.69
LRTM1-201ENST00000273286 EDIL3O43854 480 aa10.76□□□□□ -0.69
LRTM1-201ENST00000273286 CLASP2O75122 1294 aaKnown RBP10.76□□□□□ -0.69
LRTM1-201ENST00000273286 STBD1O95210 358 aa10.76□□□□□ -0.69
LRTM1-201ENST00000273286 BPNT1O95861 308 aa10.76□□□□□ -0.69
LRTM1-201ENST00000273286 PLCG1P19174 1290 aa10.76□□□□□ -0.69
LRTM1-201ENST00000273286 FGFR4P22455 802 aa10.76□□□□□ -0.69
LRTM1-201ENST00000273286 NCBP1Q09161 790 aaKnown RBP10.76□□□□□ -0.69
LRTM1-201ENST00000273286 TOB2Q14106 344 aaPredicted RBP10.76□□□□□ -0.69
LRTM1-201ENST00000273286 MLANAQ16655 118 aa10.76□□□□□ -0.69
LRTM1-201ENST00000273286 ANO5Q75V66 913 aa10.76□□□□□ -0.69
LRTM1-201ENST00000273286 NEK8Q86SG6 692 aa10.76□□□□□ -0.69
LRTM1-201ENST00000273286 SLFN12Q8IYM2 578 aa10.76□□□□□ -0.69
LRTM1-201ENST00000273286 ZDHHC14Q8IZN3 488 aa10.76□□□□□ -0.69
LRTM1-201ENST00000273286 TDRD5Q8NAT2 981 aaKnown RBP10.76□□□□□ -0.69
LRTM1-201ENST00000273286 KREMEN2Q8NCW0 462 aa10.76□□□□□ -0.69
LRTM1-201ENST00000273286 DNAJB8Q8NHS0 232 aa10.76□□□□□ -0.69
LRTM1-201ENST00000273286 PIWIL2Q8TC59 973 aaKnown RBP10.76□□□□□ -0.69
LRTM1-201ENST00000273286 PSPC1Q8WXF1 523 aaKnown RBP10.76□□□□□ -0.69
LRTM1-201ENST00000273286 LIN37Q96GY3 246 aaPredicted RBP10.76□□□□□ -0.69
LRTM1-201ENST00000273286 KIRREL1Q96J84 757 aa10.76□□□□□ -0.69
LRTM1-201ENST00000273286 ZNF668Q96K58 619 aaPredicted RBP10.76□□□□□ -0.69
LRTM1-201ENST00000273286 NLRP4Q96MN2 994 aa10.76□□□□□ -0.69
LRTM1-201ENST00000273286 TMEM175Q9BSA9 504 aa10.76□□□□□ -0.69
LRTM1-201ENST00000273286 POMKQ9H5K3 350 aa10.76□□□□□ -0.69
LRTM1-201ENST00000273286 SFXN1Q9H9B4 322 aa10.76□□□□□ -0.69
LRTM1-201ENST00000273286 KCNMB3Q9NPA1 279 aa10.76□□□□□ -0.69
LRTM1-201ENST00000273286 AGPAT5Q9NUQ2 364 aa10.76□□□□□ -0.69
LRTM1-201ENST00000273286 FAM53CQ9NYF3 392 aa10.76□□□□□ -0.69
LRTM1-201ENST00000273286 COL4A3BPQ9Y5P4 624 aa10.76□□□□□ -0.69
LRTM1-201ENST00000273286 KRTAP4-8A0A0G2JLE6 195 aa10.75□□□□□ -0.69
LRTM1-201ENST00000273286 OFD1O75665 1012 aa10.75□□□□□ -0.69
LRTM1-201ENST00000273286 GALTP07902 379 aa10.75□□□□□ -0.69
LRTM1-201ENST00000273286 AXLP30530 894 aa10.75□□□□□ -0.69
LRTM1-201ENST00000273286 GDNFP39905 211 aa10.75□□□□□ -0.69
LRTM1-201ENST00000273286 LMNB2Q03252 620 aa10.75□□□□□ -0.69
LRTM1-201ENST00000273286 DRP2Q13474 957 aa10.75□□□□□ -0.69
LRTM1-201ENST00000273286 LETM2Q2VYF4 491 aa10.75□□□□□ -0.69
LRTM1-201ENST00000273286 CYP26C1Q6V0L0 522 aa10.75□□□□□ -0.69
LRTM1-201ENST00000273286 C15orf39Q6ZRI6 1047 aa10.75□□□□□ -0.69
LRTM1-201ENST00000273286 CABP7Q86V35 215 aa10.75□□□□□ -0.69
LRTM1-201ENST00000273286 C4orf19Q8IY42 314 aa10.75□□□□□ -0.69
LRTM1-201ENST00000273286 WASF1Q92558 559 aa10.75□□□□□ -0.69
LRTM1-201ENST00000273286 FAM193BQ96PV7 902 aaPredicted RBP10.75□□□□□ -0.69
LRTM1-201ENST00000273286 ALPK1Q96QP1 1244 aa10.75□□□□□ -0.69
LRTM1-201ENST00000273286 SLC38A3Q99624 504 aa10.75□□□□□ -0.69
LRTM1-201ENST00000273286 SLKQ9H2G2 1235 aaPredicted RBP10.75□□□□□ -0.69
LRTM1-201ENST00000273286 DHX33Q9H6R0 707 aaKnown RBP10.75□□□□□ -0.69
LRTM1-201ENST00000273286 NRDE2Q9H7Z3 1164 aa10.75□□□□□ -0.69
LRTM1-201ENST00000273286 RSAD1Q9HA92 442 aa10.75□□□□□ -0.69
LRTM1-201ENST00000273286 IFT122Q9HBG6 1241 aa10.75□□□□□ -0.69
LRTM1-201ENST00000273286 VTI1BQ9UEU0 232 aa10.75□□□□□ -0.69
LRTM1-201ENST00000273286 DBR1Q9UK59 544 aaKnown RBP10.75□□□□□ -0.69
LRTM1-201ENST00000273286 STK36Q9NRP7 1315 aa10.75□□□□□ -0.69
LRTM1-201ENST00000273286 C2CD4DB7Z1M9 353 aa10.75□□□□□ -0.69
LRTM1-201ENST00000273286 NT5C1B-RDH14C9J2C7 533 aa10.75□□□□□ -0.69
LRTM1-201ENST00000273286 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.75□□□□□ -0.69
LRTM1-201ENST00000273286 MARCH6O60337 910 aa10.75□□□□□ -0.69
LRTM1-201ENST00000273286 CSDE1O75534 798 aaKnown RBP10.75□□□□□ -0.69
LRTM1-201ENST00000273286 ERLIN2O94905 339 aa10.75□□□□□ -0.69
LRTM1-201ENST00000273286 BAG4O95429 457 aaKnown RBP10.75□□□□□ -0.69
LRTM1-201ENST00000273286 C1RP00736 705 aa10.75□□□□□ -0.69
LRTM1-201ENST00000273286 ALDH2P05091 517 aa10.75□□□□□ -0.69
LRTM1-201ENST00000273286 POU5F1BQ06416 359 aa10.75□□□□□ -0.69
LRTM1-201ENST00000273286 TCF15Q12870 199 aa10.75□□□□□ -0.69
LRTM1-201ENST00000273286 CAMK2GQ13555 558 aaPredicted RBP10.75□□□□□ -0.69
LRTM1-201ENST00000273286 MXD4Q14582 209 aaPredicted RBP10.75□□□□□ -0.69
LRTM1-201ENST00000273286 EPHA7Q15375 998 aa10.75□□□□□ -0.69
LRTM1-201ENST00000273286 NPY5RQ15761 445 aa10.75□□□□□ -0.69
LRTM1-201ENST00000273286 INF2Q27J81 1249 aa10.75□□□□□ -0.69
LRTM1-201ENST00000273286 OTOP3Q7RTS5 596 aa10.75□□□□□ -0.69
LRTM1-201ENST00000273286 MRPL10Q7Z7H8 261 aaKnown RBP10.75□□□□□ -0.69
LRTM1-201ENST00000273286 SKAP1Q86WV1 359 aa10.75□□□□□ -0.69
LRTM1-201ENST00000273286 FAM13CQ8NE31 585 aa10.75□□□□□ -0.69
LRTM1-201ENST00000273286 GJA10Q969M2 543 aa10.75□□□□□ -0.69
LRTM1-201ENST00000273286 CCDC51Q96ER9 411 aa10.75□□□□□ -0.69
LRTM1-201ENST00000273286 CEP170P1Q96L14 293 aa10.75□□□□□ -0.69
LRTM1-201ENST00000273286 PHF20Q9BVI0 1012 aa10.75□□□□□ -0.69
LRTM1-201ENST00000273286 APOL5Q9BWW9 433 aa10.75□□□□□ -0.69
LRTM1-201ENST00000273286 MRPL17Q9NRX2 175 aaKnown RBP10.75□□□□□ -0.69
LRTM1-201ENST00000273286 SLAMF8Q9P0V8 285 aa10.75□□□□□ -0.69
LRTM1-201ENST00000273286 INPP5FQ9Y2H2 1132 aa10.75□□□□□ -0.69
LRTM1-201ENST00000273286 PCDHB2Q9Y5E7 798 aa10.75□□□□□ -0.69
LRTM1-201ENST00000273286 KMT2EQ8IZD2 1858 aa10.74□□□□□ -0.69
LRTM1-201ENST00000273286 CILPO75339 1184 aa10.74□□□□□ -0.69
LRTM1-201ENST00000273286 PF4P02776 101 aa10.74□□□□□ -0.69
LRTM1-201ENST00000273286 GLI1P08151 1106 aa10.74□□□□□ -0.69
LRTM1-201ENST00000273286 NCLP19338 710 aaKnown RBP10.74□□□□□ -0.69
LRTM1-201ENST00000273286 YWHABP31946 246 aaKnown RBP10.74□□□□□ -0.69
LRTM1-201ENST00000273286 TAGLNQ01995 201 aaKnown RBP10.74□□□□□ -0.69
LRTM1-201ENST00000273286 PTPN14Q15678 1187 aa10.74□□□□□ -0.69
LRTM1-201ENST00000273286 RARS2Q5T160 578 aaKnown RBP10.74□□□□□ -0.69
LRTM1-201ENST00000273286 ERICH6BQ5W0A0 696 aa10.74□□□□□ -0.69
LRTM1-201ENST00000273286 CCDC149Q6ZUS6 474 aa10.74□□□□□ -0.69
LRTM1-201ENST00000273286 HACE1Q8IYU2 909 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms