RNA–Protein interactions for RNA: ENST00000268896.9

PCTP-201, Transcript of phosphatidylcholine transfer protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCTP, Length 2,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCTP-201ENST00000268896 TANC1Q9C0D5 1861 aa17.1■□□□□ 0.33
PCTP-201ENST00000268896 ATP2C2O75185 946 aa17.09■□□□□ 0.33
PCTP-201ENST00000268896 C1QBPQ07021 282 aaKnown RBP17.09■□□□□ 0.33
PCTP-201ENST00000268896 RPS6KA1Q15418 735 aa17.09■□□□□ 0.33
PCTP-201ENST00000268896 SLFN11Q7Z7L1 901 aa17.09■□□□□ 0.33
PCTP-201ENST00000268896 NT5DC3Q86UY8 548 aa17.09■□□□□ 0.33
PCTP-201ENST00000268896 UNC93AQ86WB7 457 aa17.09■□□□□ 0.33
PCTP-201ENST00000268896 ANKRD7Q92527 254 aa17.09■□□□□ 0.33
PCTP-201ENST00000268896 CPXM1Q96SM3 734 aa17.09■□□□□ 0.33
PCTP-201ENST00000268896 TMEM106CQ9BVX2 250 aa17.09■□□□□ 0.33
PCTP-201ENST00000268896 SYNCQ9H7C4 482 aa17.09■□□□□ 0.33
PCTP-201ENST00000268896 UVRAGQ9P2Y5 699 aa17.09■□□□□ 0.33
PCTP-201ENST00000268896 AMFRQ9UKV5 643 aa17.09■□□□□ 0.33
PCTP-201ENST00000268896 GOLGA8SH3BPF8 625 aa17.09■□□□□ 0.33
PCTP-201ENST00000268896 TULP2O00295 520 aa17.09■□□□□ 0.33
PCTP-201ENST00000268896 KCNK3O14649 394 aa17.09■□□□□ 0.33
PCTP-201ENST00000268896 KIF4AO95239 1232 aa17.09■□□□□ 0.33
PCTP-201ENST00000268896 CLTBP09497 229 aa17.09■□□□□ 0.33
PCTP-201ENST00000268896 WARSP23381 471 aaKnown RBP17.09■□□□□ 0.33
PCTP-201ENST00000268896 CDH5P33151 784 aaPredicted RBP17.09■□□□□ 0.33
PCTP-201ENST00000268896 OR1G1P47890 313 aa17.09■□□□□ 0.33
PCTP-201ENST00000268896 RGS7P49802 495 aa17.09■□□□□ 0.33
PCTP-201ENST00000268896 RNASE9P60153 205 aaKnown RBP17.09■□□□□ 0.33
PCTP-201ENST00000268896 ABI1Q8IZP0 508 aa17.09■□□□□ 0.33
PCTP-201ENST00000268896 MS4A14Q96JA4 679 aa17.09■□□□□ 0.33
PCTP-201ENST00000268896 ZNF518BQ9C0D4 1074 aa17.09■□□□□ 0.33
PCTP-201ENST00000268896 LHX5Q9H2C1 402 aa17.09■□□□□ 0.33
PCTP-201ENST00000268896 TBC1D13Q9NVG8 400 aa17.09■□□□□ 0.33
PCTP-201ENST00000268896 DDX43Q9NXZ2 648 aaKnown RBP17.09■□□□□ 0.33
PCTP-201ENST00000268896 HCSTQ9UBK5 93 aa17.09■□□□□ 0.33
PCTP-201ENST00000268896 DNAJB4Q9UDY4 337 aa17.09■□□□□ 0.33
PCTP-201ENST00000268896 TBX21Q9UL17 535 aa17.09■□□□□ 0.33
PCTP-201ENST00000268896 ALG6Q9Y672 507 aa17.09■□□□□ 0.33
PCTP-201ENST00000268896 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.08■□□□□ 0.33
PCTP-201ENST00000268896 UPP2O95045 317 aa17.08■□□□□ 0.33
PCTP-201ENST00000268896 CALB1P05937 261 aa17.08■□□□□ 0.33
PCTP-201ENST00000268896 GPD2P43304 727 aa17.08■□□□□ 0.33
PCTP-201ENST00000268896 MAMLD1Q13495 774 aa17.08■□□□□ 0.33
PCTP-201ENST00000268896 DAB2IPQ5VWQ8 1189 aa17.08■□□□□ 0.33
PCTP-201ENST00000268896 LCLAT1Q6UWP7 414 aa17.08■□□□□ 0.33
PCTP-201ENST00000268896 LIMS2Q7Z4I7 341 aa17.08■□□□□ 0.33
PCTP-201ENST00000268896 TTC30AQ86WT1 665 aa17.08■□□□□ 0.33
PCTP-201ENST00000268896 APBB2Q92870 758 aa17.08■□□□□ 0.33
PCTP-201ENST00000268896 FAM193BQ96PV7 902 aaPredicted RBP17.08■□□□□ 0.33
PCTP-201ENST00000268896 FAM124BQ9H5Z6 455 aaPredicted RBP17.08■□□□□ 0.33
PCTP-201ENST00000268896 AVENQ9NQS1 362 aaPredicted RBP17.08■□□□□ 0.33
PCTP-201ENST00000268896 KIAA1257Q9ULG3 409 aa17.08■□□□□ 0.33
PCTP-201ENST00000268896 PRG3Q9Y2Y8 225 aaPredicted RBP17.08■□□□□ 0.33
PCTP-201ENST00000268896 ERBB2P04626 1255 aa17.08■□□□□ 0.32
PCTP-201ENST00000268896 PFKMP08237 780 aa17.08■□□□□ 0.32
PCTP-201ENST00000268896 COMTP21964 271 aa17.08■□□□□ 0.32
PCTP-201ENST00000268896 TUBB2AQ13885 445 aa17.08■□□□□ 0.32
PCTP-201ENST00000268896 WHAMMP3Q1A5X7 153 aa17.08■□□□□ 0.32
PCTP-201ENST00000268896 C1orf53Q5VUE5 145 aa17.08■□□□□ 0.32
PCTP-201ENST00000268896 CD300LGQ6UXG3 332 aa17.08■□□□□ 0.32
PCTP-201ENST00000268896 ANKLE1Q8NAG6 615 aa17.08■□□□□ 0.32
PCTP-201ENST00000268896 SLC2A14Q8TDB8 520 aa17.08■□□□□ 0.32
PCTP-201ENST00000268896 DDX27Q96GQ7 796 aaKnown RBP17.08■□□□□ 0.32
PCTP-201ENST00000268896 VCPIP1Q96JH7 1222 aa17.08■□□□□ 0.32
PCTP-201ENST00000268896 TUBB2BQ9BVA1 445 aa17.08■□□□□ 0.32
PCTP-201ENST00000268896 ABCB6Q9NP58 842 aa17.08■□□□□ 0.32
PCTP-201ENST00000268896 PDE2AO00408 941 aaPredicted RBP17.07■□□□□ 0.32
PCTP-201ENST00000268896 MTA2O94776 668 aa17.07■□□□□ 0.32
PCTP-201ENST00000268896 CXCL10P02778 98 aa17.07■□□□□ 0.32
PCTP-201ENST00000268896 TCP1P17987 556 aaKnown RBP17.07■□□□□ 0.32
PCTP-201ENST00000268896 ITGB8P26012 769 aa17.07■□□□□ 0.32
PCTP-201ENST00000268896 HADHBP55084 474 aaKnown RBP17.07■□□□□ 0.32
PCTP-201ENST00000268896 RPL7AP62424 266 aaKnown RBP17.07■□□□□ 0.32
PCTP-201ENST00000268896 PDCLQ13371 301 aa17.07■□□□□ 0.32
PCTP-201ENST00000268896 TCEAL1Q15170 157 aa17.07■□□□□ 0.32
PCTP-201ENST00000268896 ERCC6LQ2NKX8 1250 aa17.07■□□□□ 0.32
PCTP-201ENST00000268896 KIAA0319Q5VV43 1072 aa17.07■□□□□ 0.32
PCTP-201ENST00000268896 DNAJC24Q6P3W2 148 aa17.07■□□□□ 0.32
PCTP-201ENST00000268896 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.07■□□□□ 0.329e-9■■■■■ 40.7
PCTP-201ENST00000268896 B3GALNT2Q8NCR0 500 aa17.07■□□□□ 0.32
PCTP-201ENST00000268896 MCEEQ96PE7 176 aa17.07■□□□□ 0.32
PCTP-201ENST00000268896 HESX1Q9UBX0 185 aa17.07■□□□□ 0.32
PCTP-201ENST00000268896 CLDN5O00501 218 aa17.06■□□□□ 0.32
PCTP-201ENST00000268896 SPOPO43791 374 aa17.06■□□□□ 0.32
PCTP-201ENST00000268896 TADA3O75528 432 aa17.06■□□□□ 0.32
PCTP-201ENST00000268896 TKTP29401 623 aaKnown RBP17.06■□□□□ 0.32
PCTP-201ENST00000268896 BCAR1P56945 870 aa17.06■□□□□ 0.32
PCTP-201ENST00000268896 ELF2Q15723 593 aa17.06■□□□□ 0.32
PCTP-201ENST00000268896 MDH1BQ5I0G3 518 aa17.06■□□□□ 0.32
PCTP-201ENST00000268896 TEX35Q5T0J7 233 aa17.06■□□□□ 0.32
PCTP-201ENST00000268896 PLEKHA7Q6IQ23 1121 aa17.06■□□□□ 0.32
PCTP-201ENST00000268896 C11orf63Q6NUN7 778 aa17.06■□□□□ 0.32
PCTP-201ENST00000268896 PPP1R2P3Q6NXS1 205 aa17.06■□□□□ 0.32
PCTP-201ENST00000268896 NECAB2Q7Z6G3 386 aa17.06■□□□□ 0.32
PCTP-201ENST00000268896 CREG2Q8IUH2 290 aa17.06■□□□□ 0.32
PCTP-201ENST00000268896 CEP112Q8N8E3 955 aa17.06■□□□□ 0.32
PCTP-201ENST00000268896 TNIP3Q96KP6 325 aa17.06■□□□□ 0.32
PCTP-201ENST00000268896 UROC1Q96N76 676 aa17.06■□□□□ 0.32
PCTP-201ENST00000268896 MRPL47Q9HD33 250 aaKnown RBP17.06■□□□□ 0.32
PCTP-201ENST00000268896 PARVAQ9NVD7 372 aa17.06■□□□□ 0.32
PCTP-201ENST00000268896 SCINQ9Y6U3 715 aa17.06■□□□□ 0.32
PCTP-201ENST00000268896 EFCAB8A8MWE9 144 aa17.06■□□□□ 0.32
PCTP-201ENST00000268896 INPPL1O15357 1258 aa17.06■□□□□ 0.32
PCTP-201ENST00000268896 ODC1P11926 461 aa17.06■□□□□ 0.32
PCTP-201ENST00000268896 PDE4CQ08493 712 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms