RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 PSMC3IPQ9P2W1 217 aaPredicted RBP5.94□□□□□ -1.46
VCAN-201ENST00000265077 PPRC1Q5VV67 1664 aaKnown RBP5.94□□□□□ -1.46
VCAN-201ENST00000265077 KRT36O76013 467 aa5.94□□□□□ -1.46
VCAN-201ENST00000265077 ABL1P00519 1130 aa5.94□□□□□ -1.46
VCAN-201ENST00000265077 KITP10721 976 aa5.94□□□□□ -1.46
VCAN-201ENST00000265077 KRT17Q04695 432 aa5.94□□□□□ -1.46
VCAN-201ENST00000265077 TTMPQ5BVD1 217 aa5.94□□□□□ -1.46
VCAN-201ENST00000265077 MS4A14Q96JA4 679 aa5.94□□□□□ -1.46
VCAN-201ENST00000265077 NSMCE3Q96MG7 304 aa5.94□□□□□ -1.46
VCAN-201ENST00000265077 TBC1D22BQ9NU19 505 aa5.94□□□□□ -1.46
VCAN-201ENST00000265077 MPP6Q9NZW5 540 aa5.94□□□□□ -1.46
VCAN-201ENST00000265077 DOLKQ9UPQ8 538 aa5.94□□□□□ -1.46
VCAN-201ENST00000265077 ABCB11O95342 1321 aa5.94□□□□□ -1.46
VCAN-201ENST00000265077 SFNP31947 248 aa5.94□□□□□ -1.46
VCAN-201ENST00000265077 SNRPFP62306 86 aaKnown RBP5.94□□□□□ -1.46
VCAN-201ENST00000265077 HPCAP84074 193 aa5.94□□□□□ -1.46
VCAN-201ENST00000265077 SUZ12Q15022 739 aaKnown RBP5.94□□□□□ -1.46
VCAN-201ENST00000265077 PCYOX1LQ8NBM8 494 aa5.94□□□□□ -1.46
VCAN-201ENST00000265077 ATXN2LQ8WWM7 1075 aaKnown RBP5.94□□□□□ -1.46
VCAN-201ENST00000265077 NCLNQ969V3 563 aa5.94□□□□□ -1.46
VCAN-201ENST00000265077 NEXMIFQ5QGS0 1516 aa5.94□□□□□ -1.46
VCAN-201ENST00000265077 TULP4Q9NRJ4 1543 aa5.94□□□□□ -1.46
VCAN-201ENST00000265077 SPDYE5A6NIY4 337 aa5.94□□□□□ -1.46
VCAN-201ENST00000265077 POTECB2RU33 542 aa5.94□□□□□ -1.46
VCAN-201ENST00000265077 PSMG1O95456 288 aa5.94□□□□□ -1.46
VCAN-201ENST00000265077 EPHB2P29323 1055 aa5.94□□□□□ -1.46
VCAN-201ENST00000265077 SMU1Q2TAY7 513 aa5.94□□□□□ -1.46
VCAN-201ENST00000265077 MIGA2Q7L4E1 593 aa5.94□□□□□ -1.46
VCAN-201ENST00000265077 FAM9CQ8IZT9 166 aa5.94□□□□□ -1.46
VCAN-201ENST00000265077 CHID1Q9BWS9 393 aa5.94□□□□□ -1.46
VCAN-201ENST00000265077 FEM1BQ9UK73 627 aa5.94□□□□□ -1.46
VCAN-201ENST00000265077 ZNF638Q14966 1978 aaKnown RBP5.94□□□□□ -1.46
VCAN-201ENST00000265077 CDH2P19022 906 aaPredicted RBP5.94□□□□□ -1.46
VCAN-201ENST00000265077 TYK2P29597 1187 aa5.94□□□□□ -1.46
VCAN-201ENST00000265077 ERFP50548 548 aa5.94□□□□□ -1.46
VCAN-201ENST00000265077 PLIN5Q00G26 463 aa5.94□□□□□ -1.46
VCAN-201ENST00000265077 LACTB2Q53H82 288 aaPredicted RBP5.94□□□□□ -1.46
VCAN-201ENST00000265077 RMND5BQ96G75 393 aaPredicted RBP5.94□□□□□ -1.46
VCAN-201ENST00000265077 MMTAG2Q9BU76 263 aaKnown RBP5.94□□□□□ -1.46
VCAN-201ENST00000265077 APEX2Q9UBZ4 518 aa5.94□□□□□ -1.46
VCAN-201ENST00000265077 AURKCQ9UQB9 309 aa5.94□□□□□ -1.46
VCAN-201ENST00000265077 ARHGEF28Q8N1W1 1705 aaKnown RBP5.94□□□□□ -1.46
VCAN-201ENST00000265077 RGL2O15211 777 aa5.94□□□□□ -1.46
VCAN-201ENST00000265077 WDR47O94967 919 aa5.94□□□□□ -1.46
VCAN-201ENST00000265077 GYPCP04921 128 aa5.94□□□□□ -1.46
VCAN-201ENST00000265077 PRLRP16471 622 aa5.94□□□□□ -1.46
VCAN-201ENST00000265077 CHKAP35790 457 aa5.94□□□□□ -1.46
VCAN-201ENST00000265077 LAMC2Q13753 1193 aa5.94□□□□□ -1.46
VCAN-201ENST00000265077 CYB5R4Q7L1T6 521 aa5.94□□□□□ -1.46
VCAN-201ENST00000265077 NLGN1Q8N2Q7 840 aa5.94□□□□□ -1.46
VCAN-201ENST00000265077 OR2W6PQ8NHA6 318 aa5.94□□□□□ -1.46
VCAN-201ENST00000265077 KRT35Q92764 455 aa5.94□□□□□ -1.46
VCAN-201ENST00000265077 MARCH7Q9H992 704 aa5.94□□□□□ -1.46
VCAN-201ENST00000265077 HERC5Q9UII4 1024 aaKnown RBP5.94□□□□□ -1.46
VCAN-201ENST00000265077 SNRNP200O75643 2136 aaKnown RBP5.94□□□□□ -1.46
VCAN-201ENST00000265077 CCDC195A0A1B0GUA6 201 aa5.94□□□□□ -1.46
VCAN-201ENST00000265077 TRMUO75648 421 aaKnown RBP5.94□□□□□ -1.46
VCAN-201ENST00000265077 RGS20O76081 388 aa5.94□□□□□ -1.46
VCAN-201ENST00000265077 MTMR1Q13613 665 aa5.94□□□□□ -1.46
VCAN-201ENST00000265077 TBC1D10CQ8IV04 446 aa5.94□□□□□ -1.46
VCAN-201ENST00000265077 SERPINB12Q96P63 405 aa5.94□□□□□ -1.46
VCAN-201ENST00000265077 C2orf40Q9H1Z8 148 aa5.94□□□□□ -1.46
VCAN-201ENST00000265077 SLAIN2Q9P270 581 aa5.94□□□□□ -1.46
VCAN-201ENST00000265077 SPDYE2BA6NHP3 402 aa5.94□□□□□ -1.46
VCAN-201ENST00000265077 ASNSP08243 561 aa5.94□□□□□ -1.46
VCAN-201ENST00000265077 SPDYE6P0CI01 402 aa5.94□□□□□ -1.46
VCAN-201ENST00000265077 ITGAXP20702 1163 aa5.94□□□□□ -1.46
VCAN-201ENST00000265077 SKIV2L2P42285 1042 aaKnown RBP5.94□□□□□ -1.46
VCAN-201ENST00000265077 QARSP47897 775 aaKnown RBP5.94□□□□□ -1.46
VCAN-201ENST00000265077 BCAR1P56945 870 aa5.94□□□□□ -1.46
VCAN-201ENST00000265077 TXNRD1Q16881 649 aa5.94□□□□□ -1.46
VCAN-201ENST00000265077 RAD9BQ6WBX8 426 aa5.94□□□□□ -1.46
VCAN-201ENST00000265077 PRR23CQ6ZRP0 262 aa5.94□□□□□ -1.46
VCAN-201ENST00000265077 CD302Q8IX05 232 aa5.94□□□□□ -1.46
VCAN-201ENST00000265077 SLC35G2Q8TBE7 412 aa5.94□□□□□ -1.46
VCAN-201ENST00000265077 HEY1Q9Y5J3 304 aa5.94□□□□□ -1.46
VCAN-201ENST00000265077 CLDN3O15551 220 aa5.93□□□□□ -1.46
VCAN-201ENST00000265077 RTN2O75298 545 aa5.93□□□□□ -1.46
VCAN-201ENST00000265077 C4BPBP20851 252 aa5.93□□□□□ -1.46
VCAN-201ENST00000265077 CASP1P29466 404 aa5.93□□□□□ -1.46
VCAN-201ENST00000265077 CDC27P30260 824 aa5.93□□□□□ -1.46
VCAN-201ENST00000265077 GNA15P30679 374 aa5.93□□□□□ -1.46
VCAN-201ENST00000265077 CCT3P49368 545 aaKnown RBP5.93□□□□□ -1.46
VCAN-201ENST00000265077 CDK7P50613 346 aa5.93□□□□□ -1.46
VCAN-201ENST00000265077 HABP4Q5JVS0 413 aaKnown RBP5.93□□□□□ -1.46
VCAN-201ENST00000265077 PDXDC2PQ6P474 469 aa5.93□□□□□ -1.46
VCAN-201ENST00000265077 LUZP2Q86TE4 346 aa5.93□□□□□ -1.46
VCAN-201ENST00000265077 TMEM47Q9BQJ4 181 aa5.93□□□□□ -1.46
VCAN-201ENST00000265077 PHF24Q9UPV7 400 aa5.93□□□□□ -1.46
VCAN-201ENST00000265077 GDF11O95390 407 aa5.93□□□□□ -1.46
VCAN-201ENST00000265077 PARNO95453 639 aaKnown RBP5.93□□□□□ -1.46
VCAN-201ENST00000265077 STAT3P40763 770 aa5.93□□□□□ -1.46
VCAN-201ENST00000265077 PIGHQ14442 188 aaPredicted RBP5.93□□□□□ -1.46
VCAN-201ENST00000265077 OR6B2Q6IFH4 312 aa5.93□□□□□ -1.46
VCAN-201ENST00000265077 NEK5Q6P3R8 708 aa5.93□□□□□ -1.46
VCAN-201ENST00000265077 LRRC6Q86X45 466 aa5.93□□□□□ -1.46
VCAN-201ENST00000265077 RYBPQ8N488 228 aaPredicted RBP5.93□□□□□ -1.46
VCAN-201ENST00000265077 GRPEL2Q8TAA5 225 aa5.93□□□□□ -1.46
VCAN-201ENST00000265077 NSMCE4AQ9NXX6 385 aa5.93□□□□□ -1.46
VCAN-201ENST00000265077 IDO1P14902 403 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms