RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 HSD17B14Q9BPX1 270 aa17.48■□□□□ 0.39
PHRF1-201ENST00000264555 A1CFQ9NQ94 594 aaKnown RBP17.48■□□□□ 0.39
PHRF1-201ENST00000264555 C17orf102A2RUQ5 167 aa17.48■□□□□ 0.39
PHRF1-201ENST00000264555 ZBTB24O43167 697 aaPredicted RBP17.48■□□□□ 0.39
PHRF1-201ENST00000264555 FAM200BP0CF97 657 aa17.48■□□□□ 0.39
PHRF1-201ENST00000264555 ORC1Q13415 861 aa17.48■□□□□ 0.39
PHRF1-201ENST00000264555 TTC39BQ5VTQ0 682 aaPredicted RBP17.48■□□□□ 0.39
PHRF1-201ENST00000264555 BAP1Q92560 729 aa17.48■□□□□ 0.39
PHRF1-201ENST00000264555 TMEM176AQ96HP8 235 aa17.48■□□□□ 0.39
PHRF1-201ENST00000264555 GGT7Q9UJ14 662 aa17.48■□□□□ 0.39
PHRF1-201ENST00000264555 KIF3CO14782 793 aa17.48■□□□□ 0.39
PHRF1-201ENST00000264555 MTSS1O43312 755 aa17.48■□□□□ 0.39
PHRF1-201ENST00000264555 SPATA31C1P0DKV0 1188 aa17.48■□□□□ 0.39
PHRF1-201ENST00000264555 PTPRAP18433 802 aa17.48■□□□□ 0.39
PHRF1-201ENST00000264555 ATPAF2Q8N5M1 289 aa17.48■□□□□ 0.39
PHRF1-201ENST00000264555 HDAC7Q8WUI4 952 aa17.48■□□□□ 0.39
PHRF1-201ENST00000264555 DISP2A7MBM2 1401 aa17.48■□□□□ 0.39
PHRF1-201ENST00000264555 RGPD8O14715 1765 aaPredicted RBP17.48■□□□□ 0.39
PHRF1-201ENST00000264555 EPHB6O15197 1021 aa17.48■□□□□ 0.39
PHRF1-201ENST00000264555 ADCY3O60266 1144 aa17.48■□□□□ 0.39
PHRF1-201ENST00000264555 SNX2O60749 519 aa17.48■□□□□ 0.39
PHRF1-201ENST00000264555 ZNF235Q14590 738 aa17.48■□□□□ 0.39
PHRF1-201ENST00000264555 UGP2Q16851 508 aa17.48■□□□□ 0.39
PHRF1-201ENST00000264555 ICE2Q659A1 982 aa17.48■□□□□ 0.39
PHRF1-201ENST00000264555 EPS8L3Q8TE67 593 aaKnown RBP17.48■□□□□ 0.39
PHRF1-201ENST00000264555 PDCD6IPQ8WUM4 868 aaKnown RBP17.48■□□□□ 0.39
PHRF1-201ENST00000264555 ATXN7L3BQ96GX2 97 aa17.48■□□□□ 0.39
PHRF1-201ENST00000264555 SPON2Q9BUD6 331 aa17.48■□□□□ 0.39
PHRF1-201ENST00000264555 GANQ9H2C0 597 aa17.48■□□□□ 0.39
PHRF1-201ENST00000264555 PCDHA3Q9Y5H8 950 aa17.48■□□□□ 0.39
PHRF1-201ENST00000264555 GTF2BQ00403 316 aa17.47■□□□□ 0.39
PHRF1-201ENST00000264555 AENQ8WTP8 325 aaKnown RBP17.47■□□□□ 0.39
PHRF1-201ENST00000264555 HAUS8Q9BT25 410 aa17.47■□□□□ 0.39
PHRF1-201ENST00000264555 KCTD10Q9H3F6 313 aa17.47■□□□□ 0.39
PHRF1-201ENST00000264555 NPHS2Q9NP85 383 aa17.47■□□□□ 0.39
PHRF1-201ENST00000264555 TJP2Q9UDY2 1190 aa17.47■□□□□ 0.39
PHRF1-201ENST00000264555 SUN2Q9UH99 717 aa17.47■□□□□ 0.39
PHRF1-201ENST00000264555 A0A0U1RQJ8 604 aa17.47■□□□□ 0.39
PHRF1-201ENST00000264555 ANKRD63C9JTQ0 380 aa17.47■□□□□ 0.39
PHRF1-201ENST00000264555 VTNP04004 478 aa17.47■□□□□ 0.39
PHRF1-201ENST00000264555 PTPN11Q06124 597 aaPredicted RBP17.47■□□□□ 0.39
PHRF1-201ENST00000264555 ANO4Q32M45 955 aa17.47■□□□□ 0.39
PHRF1-201ENST00000264555 FASTKD1Q53R41 847 aaKnown RBP17.47■□□□□ 0.39
PHRF1-201ENST00000264555 KCNT1Q5JUK3 1230 aa17.47■□□□□ 0.39
PHRF1-201ENST00000264555 GNASQ5JWF2 1037 aa17.47■□□□□ 0.39
PHRF1-201ENST00000264555 SLC9A9Q8IVB4 645 aa17.47■□□□□ 0.39
PHRF1-201ENST00000264555 ZNF606Q8WXB4 792 aa17.47■□□□□ 0.39
PHRF1-201ENST00000264555 SMYD3Q9H7B4 428 aa17.47■□□□□ 0.39
PHRF1-201ENST00000264555 XAB2Q9HCS7 855 aaKnown RBP17.47■□□□□ 0.39
PHRF1-201ENST00000264555 MRPL40Q9NQ50 206 aaKnown RBP17.47■□□□□ 0.39
PHRF1-201ENST00000264555 GDF3Q9NR23 364 aa17.47■□□□□ 0.39
PHRF1-201ENST00000264555 PRKAG2Q9UGJ0 569 aa17.47■□□□□ 0.39
PHRF1-201ENST00000264555 STX3Q13277 289 aa17.47■□□□□ 0.39
PHRF1-201ENST00000264555 ACOT1Q86TX2 421 aa17.47■□□□□ 0.39
PHRF1-201ENST00000264555 HIPK4Q8NE63 616 aa17.47■□□□□ 0.39
PHRF1-201ENST00000264555 PPP1R2P1Q96PQ5 205 aa17.47■□□□□ 0.39
PHRF1-201ENST00000264555 CACYBPQ9HB71 228 aaKnown RBP17.47■□□□□ 0.39
PHRF1-201ENST00000264555 A0A087WZ62 844 aa17.47■□□□□ 0.39
PHRF1-201ENST00000264555 CCT8L1PA6NM43 557 aa17.47■□□□□ 0.39
PHRF1-201ENST00000264555 BNIP3LO60238 219 aa17.47■□□□□ 0.39
PHRF1-201ENST00000264555 POLBP06746 335 aa17.47■□□□□ 0.39
PHRF1-201ENST00000264555 HUNKP57058 714 aa17.47■□□□□ 0.39
PHRF1-201ENST00000264555 MORF4L2Q15014 288 aa17.47■□□□□ 0.39
PHRF1-201ENST00000264555 BMT2Q1RMZ1 405 aa17.47■□□□□ 0.39
PHRF1-201ENST00000264555 LVRNQ6Q4G3 990 aa17.47■□□□□ 0.39
PHRF1-201ENST00000264555 N4BP2L2Q92802 583 aaPredicted RBP17.47■□□□□ 0.39
PHRF1-201ENST00000264555 FDXACB1Q9BRP7 624 aaPredicted RBP17.47■□□□□ 0.39
PHRF1-201ENST00000264555 CNPY3Q9BT09 278 aa17.47■□□□□ 0.39
PHRF1-201ENST00000264555 AVENQ9NQS1 362 aaPredicted RBP17.47■□□□□ 0.39
PHRF1-201ENST00000264555 TFRCP02786 760 aaKnown RBP17.46■□□□□ 0.39
PHRF1-201ENST00000264555 MCF2P10911 925 aa17.46■□□□□ 0.39
PHRF1-201ENST00000264555 NOP9Q86U38 636 aaKnown RBP17.46■□□□□ 0.39
PHRF1-201ENST00000264555 FAM161BQ96MY7 647 aa17.46■□□□□ 0.39
PHRF1-201ENST00000264555 CDC42EP4Q9H3Q1 356 aaKnown RBP17.46■□□□□ 0.39
PHRF1-201ENST00000264555 PLA2G6O60733 806 aa17.46■□□□□ 0.39
PHRF1-201ENST00000264555 TADA2AO75478 443 aa17.46■□□□□ 0.39
PHRF1-201ENST00000264555 CELF2O95319 508 aaKnown RBP17.46■□□□□ 0.39
PHRF1-201ENST00000264555 SLURP2P0DP57 97 aa17.46■□□□□ 0.39
PHRF1-201ENST00000264555 OTUD4Q01804 1114 aaKnown RBP17.46■□□□□ 0.39
PHRF1-201ENST00000264555 GLRA4Q5JXX5 417 aa17.46■□□□□ 0.39
PHRF1-201ENST00000264555 FRA10AC1Q70Z53 315 aa17.46■□□□□ 0.39
PHRF1-201ENST00000264555 OPTNQ96CV9 577 aa17.46■□□□□ 0.39
PHRF1-201ENST00000264555 TRIM15Q9C019 465 aa17.46■□□□□ 0.39
PHRF1-201ENST00000264555 CXCL8P10145 99 aa17.46■□□□□ 0.39
PHRF1-201ENST00000264555 PPP3CAQ08209 521 aa17.46■□□□□ 0.39
PHRF1-201ENST00000264555 ECM1Q16610 540 aa17.46■□□□□ 0.39
PHRF1-201ENST00000264555 KIZQ2M2Z5 673 aa17.46■□□□□ 0.39
PHRF1-201ENST00000264555 GRAMD1BQ3KR37 738 aa17.46■□□□□ 0.39
PHRF1-201ENST00000264555 TFB1MQ8WVM0 346 aaKnown RBP17.46■□□□□ 0.39
PHRF1-201ENST00000264555 SPDL1Q96EA4 605 aa17.46■□□□□ 0.39
PHRF1-201ENST00000264555 THEGQ9P2T0 379 aa17.46■□□□□ 0.39
PHRF1-201ENST00000264555 CAND2O75155 1236 aa17.46■□□□□ 0.39
PHRF1-201ENST00000264555 BRSK2Q8IWQ3 736 aa17.46■□□□□ 0.39
PHRF1-201ENST00000264555 GPC2Q8N158 579 aa17.46■□□□□ 0.39
PHRF1-201ENST00000264555 CPB2Q96IY4 423 aa17.46■□□□□ 0.39
PHRF1-201ENST00000264555 P2RX7Q99572 595 aaKnown RBP17.46■□□□□ 0.39
PHRF1-201ENST00000264555 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.46■□□□□ 0.39
PHRF1-201ENST00000264555 BTNL10A8MVZ5 291 aa17.46■□□□□ 0.38
PHRF1-201ENST00000264555 GSTA4O15217 222 aa17.46■□□□□ 0.38
PHRF1-201ENST00000264555 EPHX2P34913 555 aa17.46■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms