RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 SCNN1GP51170 649 aa23.67■■□□□ 1.38
SIX3-201ENST00000260653 PPP1R26Q5T8A7 1209 aaPredicted RBP23.67■■□□□ 1.38
SIX3-201ENST00000260653 LCLAT1Q6UWP7 414 aa23.67■■□□□ 1.38
SIX3-201ENST00000260653 C3orf20Q8ND61 904 aa23.67■■□□□ 1.38
SIX3-201ENST00000260653 LPIN3Q9BQK8 851 aa23.67■■□□□ 1.38
SIX3-201ENST00000260653 GIT1Q9Y2X7 761 aa23.67■■□□□ 1.38
SIX3-201ENST00000260653 TMEM191CA6NGB0 347 aa23.66■■□□□ 1.38
SIX3-201ENST00000260653 A8MXQ7 604 aa23.66■■□□□ 1.38
SIX3-201ENST00000260653 KBTBD13C9JR72 458 aa23.66■■□□□ 1.38
SIX3-201ENST00000260653 PYGMP11217 842 aa23.66■■□□□ 1.38
SIX3-201ENST00000260653 SLC1A1P43005 524 aa23.66■■□□□ 1.38
SIX3-201ENST00000260653 PDCLQ13371 301 aa23.66■■□□□ 1.38
SIX3-201ENST00000260653 MBTPS1Q14703 1052 aa23.66■■□□□ 1.38
SIX3-201ENST00000260653 PPP1R15BQ5SWA1 713 aa23.66■■□□□ 1.38
SIX3-201ENST00000260653 TRAF7Q6Q0C0 670 aa23.66■■□□□ 1.38
SIX3-201ENST00000260653 ADAT2Q7Z6V5 191 aaKnown RBP23.66■■□□□ 1.38
SIX3-201ENST00000260653 TRAIPQ9BWF2 469 aa23.66■■□□□ 1.38
SIX3-201ENST00000260653 SLC38A7Q9NVC3 462 aa23.66■■□□□ 1.38
SIX3-201ENST00000260653 STRIP2Q9ULQ0 834 aa23.66■■□□□ 1.38
SIX3-201ENST00000260653 PHF24Q9UPV7 400 aa23.66■■□□□ 1.38
SIX3-201ENST00000260653 A0A0U1RQF3 1178 aa23.66■■□□□ 1.38
SIX3-201ENST00000260653 ERBB2P04626 1255 aa23.66■■□□□ 1.38
SIX3-201ENST00000260653 THP07101 528 aa23.66■■□□□ 1.38
SIX3-201ENST00000260653 RAB27AP51159 221 aa23.66■■□□□ 1.38
SIX3-201ENST00000260653 LONRF2Q1L5Z9 754 aa23.66■■□□□ 1.38
SIX3-201ENST00000260653 GOLGA7BQ2TAP0 167 aa23.66■■□□□ 1.38
SIX3-201ENST00000260653 APPL2Q8NEU8 664 aa23.66■■□□□ 1.38
SIX3-201ENST00000260653 TSPYL2Q9H2G4 693 aaPredicted RBP23.66■■□□□ 1.38
SIX3-201ENST00000260653 PLEKHA4Q9H4M7 779 aa23.66■■□□□ 1.38
SIX3-201ENST00000260653 SYNCQ9H7C4 482 aa23.66■■□□□ 1.38
SIX3-201ENST00000260653 NR2E1Q9Y466 385 aa23.66■■□□□ 1.38
SIX3-201ENST00000260653 GOLGA8SH3BPF8 625 aa23.65■■□□□ 1.38
SIX3-201ENST00000260653 ZNF623O75123 536 aa23.65■■□□□ 1.38
SIX3-201ENST00000260653 CAND2O75155 1236 aa23.65■■□□□ 1.38
SIX3-201ENST00000260653 LMO2P25791 158 aa23.65■■□□□ 1.38
SIX3-201ENST00000260653 ZNF252P-AS1Q0IIN9 211 aa23.65■■□□□ 1.38
SIX3-201ENST00000260653 DCUN1D2Q6PH85 259 aa23.65■■□□□ 1.38
SIX3-201ENST00000260653 UNC93AQ86WB7 457 aa23.65■■□□□ 1.38
SIX3-201ENST00000260653 C18orf8Q96DM3 657 aa23.65■■□□□ 1.38
SIX3-201ENST00000260653 PDGFRBP09619 1106 aa23.65■■□□□ 1.38
SIX3-201ENST00000260653 RWDD2BP57060 319 aa23.65■■□□□ 1.38
SIX3-201ENST00000260653 OGDHQ02218 1023 aa23.65■■□□□ 1.38
SIX3-201ENST00000260653 LIMS2Q7Z4I7 341 aa23.65■■□□□ 1.38
SIX3-201ENST00000260653 ARVCFO00192 962 aa23.64■■□□□ 1.38
SIX3-201ENST00000260653 TUBBP07437 444 aa23.64■■□□□ 1.38
SIX3-201ENST00000260653 PFKMP08237 780 aa23.64■■□□□ 1.38
SIX3-201ENST00000260653 PSMC1P62191 440 aaKnown RBP23.64■■□□□ 1.38
SIX3-201ENST00000260653 XYLT1Q86Y38 959 aa23.64■■□□□ 1.38
SIX3-201ENST00000260653 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.64■■□□□ 1.38
SIX3-201ENST00000260653 ARFGAP3Q9NP61 516 aa23.64■■□□□ 1.38
SIX3-201ENST00000260653 USTQ9Y2C2 406 aa23.64■■□□□ 1.38
SIX3-201ENST00000260653 GNL1P36915 607 aaPredicted RBP23.64■■□□□ 1.37
SIX3-201ENST00000260653 SEL1L2Q5TEA6 688 aa23.64■■□□□ 1.37
SIX3-201ENST00000260653 ADGRF2Q8IZF7 708 aa23.64■■□□□ 1.37
SIX3-201ENST00000260653 DDX47Q9H0S4 455 aaKnown RBP23.64■■□□□ 1.37
SIX3-201ENST00000260653 RSAD1Q9HA92 442 aa23.64■■□□□ 1.37
SIX3-201ENST00000260653 STIM2Q9P246 746 aa23.64■■□□□ 1.37
SIX3-201ENST00000260653 IP6K2Q9UHH9 426 aa23.64■■□□□ 1.37
SIX3-201ENST00000260653 SQORQ9Y6N5 450 aa23.64■■□□□ 1.37
SIX3-201ENST00000260653 HUS1O60921 280 aa23.63■■□□□ 1.37
SIX3-201ENST00000260653 ZRANB2O95218 330 aaKnown RBP eCLIP23.63■■□□□ 1.37
SIX3-201ENST00000260653 CLCNKBP51801 687 aa23.63■■□□□ 1.37
SIX3-201ENST00000260653 TAS2R40P59535 323 aa23.63■■□□□ 1.37
SIX3-201ENST00000260653 STILQ15468 1287 aa23.63■■□□□ 1.37
SIX3-201ENST00000260653 TTC30AQ86WT1 665 aa23.63■■□□□ 1.37
SIX3-201ENST00000260653 SNX25Q9H3E2 840 aa23.63■■□□□ 1.37
SIX3-201ENST00000260653 ST7Q9NRC1 585 aa23.63■■□□□ 1.37
SIX3-201ENST00000260653 GLE1Q53GS7 698 aaKnown RBP23.63■■□□□ 1.37
SIX3-201ENST00000260653 CASTOR2A6NHX0 329 aa23.62■■□□□ 1.37
SIX3-201ENST00000260653 CCDC188H7C350 402 aa23.62■■□□□ 1.37
SIX3-201ENST00000260653 RAD51CO43502 376 aa23.62■■□□□ 1.37
SIX3-201ENST00000260653 MTFR1Q15390 333 aa23.62■■□□□ 1.37
SIX3-201ENST00000260653 HNRNPLLQ8WVV9 542 aaKnown RBP23.62■■□□□ 1.37
SIX3-201ENST00000260653 NAP1L3Q99457 506 aaPredicted RBP23.62■■□□□ 1.37
SIX3-201ENST00000260653 PAAF1Q9BRP4 392 aa23.62■■□□□ 1.37
SIX3-201ENST00000260653 TULP2O00295 520 aa23.62■■□□□ 1.37
SIX3-201ENST00000260653 PIK3R2O00459 728 aa23.62■■□□□ 1.37
SIX3-201ENST00000260653 PODXLO00592 558 aa23.62■■□□□ 1.37
SIX3-201ENST00000260653 ERLIN1O75477 346 aa23.62■■□□□ 1.37
SIX3-201ENST00000260653 POMCP01189 267 aa23.62■■□□□ 1.37
SIX3-201ENST00000260653 MYBL2P10244 700 aa23.62■■□□□ 1.37
SIX3-201ENST00000260653 MAN1A1P33908 653 aa23.62■■□□□ 1.37
SIX3-201ENST00000260653 RFC1P35251 1148 aaPredicted RBP23.62■■□□□ 1.37
SIX3-201ENST00000260653 GABRB2P47870 512 aa23.62■■□□□ 1.37
SIX3-201ENST00000260653 TAP1Q03518 808 aa23.62■■□□□ 1.37
SIX3-201ENST00000260653 PKDCCQ504Y2 493 aa23.62■■□□□ 1.37
SIX3-201ENST00000260653 OSTM1Q86WC4 334 aa23.62■■□□□ 1.37
SIX3-201ENST00000260653 GSPT2Q8IYD1 628 aaKnown RBP23.62■■□□□ 1.37
SIX3-201ENST00000260653 TOP6BLQ8N6T0 577 aa23.62■■□□□ 1.37
SIX3-201ENST00000260653 C3orf58Q8NDZ4 430 aa23.62■■□□□ 1.37
SIX3-201ENST00000260653 JOSD2Q8TAC2 188 aa23.62■■□□□ 1.37
SIX3-201ENST00000260653 DDX27Q96GQ7 796 aaKnown RBP23.62■■□□□ 1.37
SIX3-201ENST00000260653 PTPN22Q9Y2R2 807 aa23.62■■□□□ 1.37
SIX3-201ENST00000260653 F8VP50 259 aa23.61■■□□□ 1.37
SIX3-201ENST00000260653 CYB561D2O14569 222 aa23.61■■□□□ 1.37
SIX3-201ENST00000260653 SART1O43290 800 aaKnown RBP23.61■■□□□ 1.37
SIX3-201ENST00000260653 GLI1P08151 1106 aa23.61■■□□□ 1.37
SIX3-201ENST00000260653 KRT3P12035 628 aa23.61■■□□□ 1.37
SIX3-201ENST00000260653 TCF4P15884 667 aa23.61■■□□□ 1.37
SIX3-201ENST00000260653 GSCP56915 257 aaPredicted RBP23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms