RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 C16orf72Q14CZ0 275 aa8.1□□□□□ -1.11
GPNMB-201ENST00000258733 EEF1A1P5Q5VTE0 462 aa8.1□□□□□ -1.11
GPNMB-201ENST00000258733 DRICH1Q6PGQ1 229 aaPredicted RBP8.1□□□□□ -1.11
GPNMB-201ENST00000258733 KRT26Q7Z3Y9 468 aa8.1□□□□□ -1.11
GPNMB-201ENST00000258733 RALYLQ86SE5 291 aaKnown RBP8.1□□□□□ -1.11
GPNMB-201ENST00000258733 ADGRG5Q8IZF4 528 aa8.1□□□□□ -1.11
GPNMB-201ENST00000258733 SCFD2Q8WU76 684 aa8.1□□□□□ -1.11
GPNMB-201ENST00000258733 SHC3Q92529 594 aa8.1□□□□□ -1.11
GPNMB-201ENST00000258733 TRIM47Q96LD4 638 aa8.1□□□□□ -1.11
GPNMB-201ENST00000258733 CFAP57Q96MR6 1250 aa8.1□□□□□ -1.11
GPNMB-201ENST00000258733 CDRT15Q96T59 188 aa8.1□□□□□ -1.11
GPNMB-201ENST00000258733 HERPUD2Q9BSE4 406 aa8.1□□□□□ -1.11
GPNMB-201ENST00000258733 DPEP3Q9H4B8 488 aa8.1□□□□□ -1.11
GPNMB-201ENST00000258733 NPHP4O75161 1426 aaPredicted RBP8.1□□□□□ -1.11
GPNMB-201ENST00000258733 RAB19A4D1S5 217 aa8.1□□□□□ -1.11
GPNMB-201ENST00000258733 PHF20L1A8MW92 1017 aa8.1□□□□□ -1.11
GPNMB-201ENST00000258733 H0Y858 1186 aa8.1□□□□□ -1.11
GPNMB-201ENST00000258733 BTN3A1O00481 513 aa8.1□□□□□ -1.11
GPNMB-201ENST00000258733 SHOXO15266 292 aa8.1□□□□□ -1.11
GPNMB-201ENST00000258733 DAB1O75553 588 aa8.1□□□□□ -1.11
GPNMB-201ENST00000258733 DCTN3O75935 186 aa8.1□□□□□ -1.11
GPNMB-201ENST00000258733 PAEPP09466 180 aa8.1□□□□□ -1.11
GPNMB-201ENST00000258733 VAV2P52735 878 aa8.1□□□□□ -1.11
GPNMB-201ENST00000258733 COPS2P61201 443 aa8.1□□□□□ -1.11
GPNMB-201ENST00000258733 FOXK2Q01167 660 aa8.1□□□□□ -1.11
GPNMB-201ENST00000258733 FCHO2Q0JRZ9 810 aa8.1□□□□□ -1.11
GPNMB-201ENST00000258733 NKX1-1Q15270 411 aaPredicted RBP8.1□□□□□ -1.11
GPNMB-201ENST00000258733 MAPKAPK3Q16644 382 aa8.1□□□□□ -1.11
GPNMB-201ENST00000258733 ARSHQ5FYA8 562 aa8.1□□□□□ -1.11
GPNMB-201ENST00000258733 AARS2Q5JTZ9 985 aaKnown RBP8.1□□□□□ -1.11
GPNMB-201ENST00000258733 HGSNATQ68CP4 663 aa8.1□□□□□ -1.11
GPNMB-201ENST00000258733 RNF19BQ6ZMZ0 732 aa8.1□□□□□ -1.11
GPNMB-201ENST00000258733 FAM47EQ6ZV65 393 aa8.1□□□□□ -1.11
GPNMB-201ENST00000258733 FBXL6Q8N531 539 aa8.1□□□□□ -1.11
GPNMB-201ENST00000258733 PCYOX1LQ8NBM8 494 aa8.1□□□□□ -1.11
GPNMB-201ENST00000258733 OR8K3Q8NH51 312 aa8.1□□□□□ -1.11
GPNMB-201ENST00000258733 SYTL5Q8TDW5 730 aaPredicted RBP8.1□□□□□ -1.11
GPNMB-201ENST00000258733 CIDECQ96AQ7 238 aaPredicted RBP8.1□□□□□ -1.11
GPNMB-201ENST00000258733 EXOC2Q96KP1 924 aa8.1□□□□□ -1.11
GPNMB-201ENST00000258733 RPRD1AQ96P16 312 aaPredicted RBP8.1□□□□□ -1.11
GPNMB-201ENST00000258733 NAPGQ99747 312 aaPredicted RBP8.1□□□□□ -1.11
GPNMB-201ENST00000258733 EPS15L1Q9UBC2 864 aa8.1□□□□□ -1.11
GPNMB-201ENST00000258733 PRSS44E7EML9 344 aa8.09□□□□□ -1.11
GPNMB-201ENST00000258733 SLC7A4O43246 635 aa8.09□□□□□ -1.11
GPNMB-201ENST00000258733 BRINP1O60477 761 aa8.09□□□□□ -1.11
GPNMB-201ENST00000258733 USP2O75604 605 aaPredicted RBP8.09□□□□□ -1.11
GPNMB-201ENST00000258733 MYL4P12829 197 aa8.09□□□□□ -1.11
GPNMB-201ENST00000258733 PCSK2P16519 638 aa8.09□□□□□ -1.11
GPNMB-201ENST00000258733 SULT1E1P49888 294 aa8.09□□□□□ -1.11
GPNMB-201ENST00000258733 SLC39A14Q15043 492 aa8.09□□□□□ -1.11
GPNMB-201ENST00000258733 ALX1Q15699 326 aa8.09□□□□□ -1.11
GPNMB-201ENST00000258733 ADCK5Q3MIX3 580 aa8.09□□□□□ -1.11
GPNMB-201ENST00000258733 ZNF569Q5MCW4 686 aa8.09□□□□□ -1.11
GPNMB-201ENST00000258733 ASRGL1Q7L266 308 aa8.09□□□□□ -1.11
GPNMB-201ENST00000258733 SLFN11Q7Z7L1 901 aa8.09□□□□□ -1.11
GPNMB-201ENST00000258733 RNF135Q8IUD6 432 aa8.09□□□□□ -1.11
GPNMB-201ENST00000258733 CPXCR1Q8N123 301 aa8.09□□□□□ -1.11
GPNMB-201ENST00000258733 ATAD1Q8NBU5 361 aa8.09□□□□□ -1.11
GPNMB-201ENST00000258733 TSEN2Q8NCE0 465 aaKnown RBP8.09□□□□□ -1.11
GPNMB-201ENST00000258733 LHFPL5Q8TAF8 219 aa8.09□□□□□ -1.11
GPNMB-201ENST00000258733 AGR3Q8TD06 166 aa8.09□□□□□ -1.11
GPNMB-201ENST00000258733 CAPSLQ8WWF8 208 aa8.09□□□□□ -1.11
GPNMB-201ENST00000258733 POMGNT1Q8WZA1 660 aa8.09□□□□□ -1.11
GPNMB-201ENST00000258733 MARC2Q969Z3 335 aa8.09□□□□□ -1.11
GPNMB-201ENST00000258733 VPS33AQ96AX1 596 aa8.09□□□□□ -1.11
GPNMB-201ENST00000258733 TMEM68Q96MH6 324 aa8.09□□□□□ -1.11
GPNMB-201ENST00000258733 PHF20Q9BVI0 1012 aa8.09□□□□□ -1.11
GPNMB-201ENST00000258733 NCOR1P1Q9H4R4 102 aa8.09□□□□□ -1.11
GPNMB-201ENST00000258733 GPRC5DQ9NZD1 345 aa8.09□□□□□ -1.11
GPNMB-201ENST00000258733 FETUBQ9UGM5 382 aa8.09□□□□□ -1.11
GPNMB-201ENST00000258733 CYB5R1Q9UHQ9 305 aa8.09□□□□□ -1.11
GPNMB-201ENST00000258733 SLC12A6Q9UHW9 1150 aa8.09□□□□□ -1.11
GPNMB-201ENST00000258733 PNMA3Q9UL41 463 aa8.09□□□□□ -1.11
GPNMB-201ENST00000258733 UTP11Q9Y3A2 253 aaKnown RBP8.09□□□□□ -1.11
GPNMB-201ENST00000258733 CBY1Q9Y3M2 126 aa8.09□□□□□ -1.11
GPNMB-201ENST00000258733 ZNF804BA4D1E1 1349 aa8.09□□□□□ -1.11
GPNMB-201ENST00000258733 FLT1P17948 1338 aa8.09□□□□□ -1.11
GPNMB-201ENST00000258733 NPHP3-ACAD11A0A0J9YXS1 232 aa8.09□□□□□ -1.11
GPNMB-201ENST00000258733 DNAJC6O75061 913 aa8.09□□□□□ -1.11
GPNMB-201ENST00000258733 P4HBP07237 508 aaKnown RBP8.09□□□□□ -1.11
GPNMB-201ENST00000258733 NUDT1P36639 197 aa8.09□□□□□ -1.11
GPNMB-201ENST00000258733 HCAR3P49019 387 aa8.09□□□□□ -1.11
GPNMB-201ENST00000258733 KCNC4Q03721 635 aa8.09□□□□□ -1.11
GPNMB-201ENST00000258733 RNASELQ05823 741 aaKnown RBP8.09□□□□□ -1.11
GPNMB-201ENST00000258733 EDRF1Q3B7T1 1238 aa8.09□□□□□ -1.11
GPNMB-201ENST00000258733 WDR72Q3MJ13 1102 aa8.09□□□□□ -1.11
GPNMB-201ENST00000258733 TBRG1Q3YBR2 411 aa8.09□□□□□ -1.11
GPNMB-201ENST00000258733 DCAF6Q58WW2 860 aa8.09□□□□□ -1.11
GPNMB-201ENST00000258733 TPGS2Q68CL5 300 aa8.09□□□□□ -1.11
GPNMB-201ENST00000258733 KLHDC10Q6PID8 442 aa8.09□□□□□ -1.11
GPNMB-201ENST00000258733 ELMSAN1Q6PJG2 1045 aa8.09□□□□□ -1.11
GPNMB-201ENST00000258733 STOX1Q6ZVD7 989 aa8.09□□□□□ -1.11
GPNMB-201ENST00000258733 USP51Q70EK9 711 aa8.09□□□□□ -1.11
GPNMB-201ENST00000258733 TAS2R42Q7RTR8 314 aa8.09□□□□□ -1.11
GPNMB-201ENST00000258733 CENPSQ8N2Z9 138 aa8.09□□□□□ -1.11
GPNMB-201ENST00000258733 TCAIMQ8N3R3 496 aa8.09□□□□□ -1.11
GPNMB-201ENST00000258733 CPA6Q8N4T0 437 aa8.09□□□□□ -1.11
GPNMB-201ENST00000258733 ZNF579Q8NAF0 562 aaKnown RBP8.09□□□□□ -1.11
GPNMB-201ENST00000258733 PIK3C3Q8NEB9 887 aa8.09□□□□□ -1.11
GPNMB-201ENST00000258733 ZNF680Q8NEM1 530 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms