RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 FAM111AQ96PZ2 611 aa14.2□□□□□ -0.14
VHL-201ENST00000256474 AVENQ9NQS1 362 aaPredicted RBP14.2□□□□□ -0.14
VHL-201ENST00000256474 ARMCX1Q9P291 453 aa14.2□□□□□ -0.14
VHL-201ENST00000256474 NKX1-2Q9UD57 310 aaPredicted RBP14.2□□□□□ -0.14
VHL-201ENST00000256474 ZMYND8Q9ULU4 1186 aaPredicted RBP14.2□□□□□ -0.14
VHL-201ENST00000256474 CHKBQ9Y259 395 aa14.2□□□□□ -0.14
VHL-201ENST00000256474 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.19□□□□□ -0.14
VHL-201ENST00000256474 NOP56O00567 594 aaKnown RBP14.19□□□□□ -0.14
VHL-201ENST00000256474 FAM155BO75949 473 aa14.19□□□□□ -0.14
VHL-201ENST00000256474 MT-ND3P03897 115 aa14.19□□□□□ -0.14
VHL-201ENST00000256474 CRELD2Q6UXH1 353 aaPredicted RBP14.19□□□□□ -0.14
VHL-201ENST00000256474 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.19□□□□□ -0.14
VHL-201ENST00000256474 C7orf43Q8WVR3 580 aa14.19□□□□□ -0.14
VHL-201ENST00000256474 FBXO6Q9NRD1 293 aaPredicted RBP14.19□□□□□ -0.14
VHL-201ENST00000256474 STK32BQ9NY57 414 aa14.19□□□□□ -0.14
VHL-201ENST00000256474 XPO7Q9UIA9 1087 aaKnown RBP14.19□□□□□ -0.14
VHL-201ENST00000256474 ATP8B3O60423 1300 aa14.19□□□□□ -0.14
VHL-201ENST00000256474 SLX4Q8IY92 1834 aa14.19□□□□□ -0.14
VHL-201ENST00000256474 LAMA2P24043 3122 aaKnown RBP14.19□□□□□ -0.14
VHL-201ENST00000256474 CYP1A1P04798 512 aaPredicted RBP14.19□□□□□ -0.14
VHL-201ENST00000256474 ACO1P21399 889 aaKnown RBP14.19□□□□□ -0.14
VHL-201ENST00000256474 GCKP35557 465 aa14.19□□□□□ -0.14
VHL-201ENST00000256474 KLF1Q13351 362 aaPredicted RBP14.19□□□□□ -0.14
VHL-201ENST00000256474 KATNAL2Q8IYT4 538 aa14.19□□□□□ -0.14
VHL-201ENST00000256474 VPS52Q8N1B4 723 aa14.19□□□□□ -0.14
VHL-201ENST00000256474 MCUR1Q96AQ8 359 aa14.19□□□□□ -0.14
VHL-201ENST00000256474 PAFAH2Q99487 392 aa14.19□□□□□ -0.14
VHL-201ENST00000256474 TRIM56Q9BRZ2 755 aaKnown RBP14.19□□□□□ -0.14
VHL-201ENST00000256474 NGRNQ9NPE2 291 aaKnown RBP14.19□□□□□ -0.14
VHL-201ENST00000256474 DKC1O60832 514 aaKnown RBP eCLIP14.19□□□□□ -0.14
VHL-201ENST00000256474 LYPLA2O95372 231 aa14.19□□□□□ -0.14
VHL-201ENST00000256474 OATP04181 439 aa14.19□□□□□ -0.14
VHL-201ENST00000256474 RBP3P10745 1247 aa14.19□□□□□ -0.14
VHL-201ENST00000256474 EIF3EP60228 445 aaKnown RBP14.19□□□□□ -0.14
VHL-201ENST00000256474 MXRA7P84157 204 aa14.19□□□□□ -0.14
VHL-201ENST00000256474 LMNB2Q03252 620 aa14.19□□□□□ -0.14
VHL-201ENST00000256474 LY6KQ17RY6 165 aa14.19□□□□□ -0.14
VHL-201ENST00000256474 RAB6CQ53S08 254 aa14.19□□□□□ -0.14
VHL-201ENST00000256474 TFDP3Q5H9I0 405 aa14.19□□□□□ -0.14
VHL-201ENST00000256474 SH3PXD2AQ5TCZ1 1133 aa14.19□□□□□ -0.14
VHL-201ENST00000256474 NLRP9Q7RTR0 991 aa14.19□□□□□ -0.14
VHL-201ENST00000256474 UNC45BQ8IWX7 931 aa14.19□□□□□ -0.14
VHL-201ENST00000256474 RFWD2Q8NHY2 731 aa14.19□□□□□ -0.14
VHL-201ENST00000256474 YIPF3Q9GZM5 350 aa14.19□□□□□ -0.14
VHL-201ENST00000256474 RAB6CQ9H0N0 254 aa14.19□□□□□ -0.14
VHL-201ENST00000256474 TXLNGQ9NUQ3 528 aa14.19□□□□□ -0.14
VHL-201ENST00000256474 SYNJ2BP-COX16A0A087WUM0 186 aa14.18□□□□□ -0.14
VHL-201ENST00000256474 SUPT20HL2P0C7V6 817 aa14.18□□□□□ -0.14
VHL-201ENST00000256474 BMPR2Q13873 1038 aa14.18□□□□□ -0.14
VHL-201ENST00000256474 SUPT20HL1Q3ZLR7 823 aa14.18□□□□□ -0.14
VHL-201ENST00000256474 SYDE1Q6ZW31 735 aaPredicted RBP14.18□□□□□ -0.14
VHL-201ENST00000256474 OTOAQ7RTW8 1153 aa14.18□□□□□ -0.14
VHL-201ENST00000256474 CCDC125Q86Z20 511 aa14.18□□□□□ -0.14
VHL-201ENST00000256474 RTKN2Q8IZC4 609 aa14.18□□□□□ -0.14
VHL-201ENST00000256474 SPATA18Q8TC71 538 aa14.18□□□□□ -0.14
VHL-201ENST00000256474 COX16Q9P0S2 106 aa14.18□□□□□ -0.14
VHL-201ENST00000256474 ARHGAP28Q9P2N2 729 aa14.18□□□□□ -0.14
VHL-201ENST00000256474 USH1CQ9Y6N9 552 aa14.18□□□□□ -0.14
VHL-201ENST00000256474 B4GALT5O43286 388 aa14.18□□□□□ -0.14
VHL-201ENST00000256474 ZBTB7AO95365 584 aa14.18□□□□□ -0.14
VHL-201ENST00000256474 INHBAP08476 426 aa14.18□□□□□ -0.14
VHL-201ENST00000256474 TROVE2P10155 538 aaKnown RBP eCLIP14.18□□□□□ -0.14
VHL-201ENST00000256474 VCPP55072 806 aaKnown RBP14.18□□□□□ -0.14
VHL-201ENST00000256474 MAPK6Q16659 721 aa14.18□□□□□ -0.14
VHL-201ENST00000256474 NBPF20Q3BBV1 942 aa14.18□□□□□ -0.14
VHL-201ENST00000256474 ZNF568Q3ZCX4 644 aa14.18□□□□□ -0.14
VHL-201ENST00000256474 ANKRD20A3Q5VUR7 823 aa14.18□□□□□ -0.14
VHL-201ENST00000256474 NIPA1Q7RTP0 329 aa14.18□□□□□ -0.14
VHL-201ENST00000256474 RPAINQ86UA6 219 aa14.18□□□□□ -0.14
VHL-201ENST00000256474 PDIK1LQ8N165 341 aa14.18□□□□□ -0.14
VHL-201ENST00000256474 ZNF75CPQ92670 426 aaPredicted RBP14.18□□□□□ -0.14
VHL-201ENST00000256474 FBXL18Q96ME1 805 aa14.18□□□□□ -0.14
VHL-201ENST00000256474 TIPINQ9BVW5 301 aa14.18□□□□□ -0.14
VHL-201ENST00000256474 ST6GALNAC4Q9H4F1 302 aa14.18□□□□□ -0.14
VHL-201ENST00000256474 PSMC3IPQ9P2W1 217 aaPredicted RBP14.18□□□□□ -0.14
VHL-201ENST00000256474 NR2E3Q9Y5X4 410 aa14.18□□□□□ -0.14
VHL-201ENST00000256474 UNC5CO95185 931 aa14.18□□□□□ -0.14
VHL-201ENST00000256474 CDH6P55285 790 aa14.18□□□□□ -0.14
VHL-201ENST00000256474 ARL4CP56559 192 aa14.18□□□□□ -0.14
VHL-201ENST00000256474 ZNF252P-AS1Q0IIN9 211 aa14.18□□□□□ -0.14
VHL-201ENST00000256474 CAPSQ13938 189 aa14.18□□□□□ -0.14
VHL-201ENST00000256474 ANKRD20A2Q5SQ80 823 aa14.18□□□□□ -0.14
VHL-201ENST00000256474 FAM102AQ5T9C2 384 aaPredicted RBP14.18□□□□□ -0.14
VHL-201ENST00000256474 ANKRD20A1Q5TYW2 823 aa14.18□□□□□ -0.14
VHL-201ENST00000256474 OR6B2Q6IFH4 312 aa14.18□□□□□ -0.14
VHL-201ENST00000256474 HEXIM2Q96MH2 286 aaKnown RBP14.18□□□□□ -0.14
VHL-201ENST00000256474 HEY2Q9UBP5 337 aa14.18□□□□□ -0.14
VHL-201ENST00000256474 ONECUT3O60422 494 aaPredicted RBP14.17□□□□□ -0.14
VHL-201ENST00000256474 LPXNO60711 386 aa14.17□□□□□ -0.14
VHL-201ENST00000256474 ATP4AP20648 1035 aa14.17□□□□□ -0.14
VHL-201ENST00000256474 MMP8P22894 467 aa14.17□□□□□ -0.14
VHL-201ENST00000256474 KLRC2P26717 231 aa14.17□□□□□ -0.14
VHL-201ENST00000256474 IL1R2P27930 398 aa14.17□□□□□ -0.14
VHL-201ENST00000256474 STAT5BP51692 787 aa14.17□□□□□ -0.14
VHL-201ENST00000256474 BACE1P56817 501 aa14.17□□□□□ -0.14
VHL-201ENST00000256474 STXBP2Q15833 593 aa14.17□□□□□ -0.14
VHL-201ENST00000256474 CASC4Q6P4E1 433 aa14.17□□□□□ -0.14
VHL-201ENST00000256474 TMEM192Q8IY95 271 aa14.17□□□□□ -0.14
VHL-201ENST00000256474 RAB3IPQ96QF0 476 aaPredicted RBP14.17□□□□□ -0.14
VHL-201ENST00000256474 TBC1D10AQ9BXI6 508 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms