RNA–Protein interactions for RNA: ENST00000254630.11

PTCD3-201, Transcript of pentatricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD3, Length 6,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-201ENST00000254630 AP1G2O75843 785 aa9.08□□□□□ -0.96
PTCD3-201ENST00000254630 PDHA1P08559 390 aa9.08□□□□□ -0.96
PTCD3-201ENST00000254630 SLC2A3P11169 496 aa9.08□□□□□ -0.96
PTCD3-201ENST00000254630 MZF1P28698 734 aaPredicted RBP9.08□□□□□ -0.96
PTCD3-201ENST00000254630 GEMP55040 296 aa9.08□□□□□ -0.96
PTCD3-201ENST00000254630 CCZ1BP86790 482 aa9.08□□□□□ -0.96
PTCD3-201ENST00000254630 CCZ1P86791 482 aaPredicted RBP9.08□□□□□ -0.96
PTCD3-201ENST00000254630 CCDC15Q0P6D6 951 aa9.08□□□□□ -0.96
PTCD3-201ENST00000254630 SEZ6Q53EL9 994 aa9.08□□□□□ -0.96
PTCD3-201ENST00000254630 RABGAP1LQ5R372 815 aa9.08□□□□□ -0.96
PTCD3-201ENST00000254630 MTMR12Q9C0I1 747 aa9.08□□□□□ -0.96
PTCD3-201ENST00000254630 RRAGCQ9HB90 399 aa9.08□□□□□ -0.96
PTCD3-201ENST00000254630 NKRFO15226 690 aaKnown RBP eCLIP9.08□□□□□ -0.96
PTCD3-201ENST00000254630 MED24O75448 989 aa9.08□□□□□ -0.96
PTCD3-201ENST00000254630 GYS1P13807 737 aa9.08□□□□□ -0.96
PTCD3-201ENST00000254630 GCLCP48506 637 aaPredicted RBP9.08□□□□□ -0.96
PTCD3-201ENST00000254630 AGBL2Q5U5Z8 902 aa9.08□□□□□ -0.96
PTCD3-201ENST00000254630 AP1ARQ63HQ0 302 aa9.08□□□□□ -0.96
PTCD3-201ENST00000254630 CLEC17AQ6ZS10 378 aa9.08□□□□□ -0.96
PTCD3-201ENST00000254630 LONP2Q86WA8 852 aa9.08□□□□□ -0.96
PTCD3-201ENST00000254630 TRIM48Q8IWZ4 208 aa9.08□□□□□ -0.96
PTCD3-201ENST00000254630 GLT1D1Q96MS3 346 aa9.08□□□□□ -0.96
PTCD3-201ENST00000254630 KIF2CQ99661 725 aa9.08□□□□□ -0.96
PTCD3-201ENST00000254630 TARS2Q9BW92 718 aaKnown RBP9.08□□□□□ -0.96
PTCD3-201ENST00000254630 MRPL1Q9BYD6 325 aaKnown RBP9.08□□□□□ -0.96
PTCD3-201ENST00000254630 FRMD8P1Q9BZ68 369 aaPredicted RBP9.08□□□□□ -0.96
PTCD3-201ENST00000254630 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.08□□□□□ -0.96
PTCD3-201ENST00000254630 TMEM131LA2VDJ0 1609 aa9.08□□□□□ -0.96
PTCD3-201ENST00000254630 H2AFYO75367 372 aaKnown RBP9.08□□□□□ -0.96
PTCD3-201ENST00000254630 CARSP49589 748 aaKnown RBP9.08□□□□□ -0.96
PTCD3-201ENST00000254630 GUCY1A3Q02108 690 aa9.08□□□□□ -0.96
PTCD3-201ENST00000254630 PRMT6Q96LA8 375 aaPredicted RBP9.08□□□□□ -0.96
PTCD3-201ENST00000254630 SMAPO00193 183 aa9.07□□□□□ -0.96
PTCD3-201ENST00000254630 MTSS1O43312 755 aa9.07□□□□□ -0.96
PTCD3-201ENST00000254630 RAD51CO43502 376 aa9.07□□□□□ -0.96
PTCD3-201ENST00000254630 CLASP2O75122 1294 aaKnown RBP9.07□□□□□ -0.96
PTCD3-201ENST00000254630 PGM1P36871 562 aa9.07□□□□□ -0.96
PTCD3-201ENST00000254630 NAPEPLDQ6IQ20 393 aa9.07□□□□□ -0.96
PTCD3-201ENST00000254630 TIGD7Q6NT04 549 aaPredicted RBP9.07□□□□□ -0.96
PTCD3-201ENST00000254630 JAMLQ86YT9 394 aa9.07□□□□□ -0.96
PTCD3-201ENST00000254630 KIRREL3Q8IZU9 778 aa9.07□□□□□ -0.96
PTCD3-201ENST00000254630 STX19Q8N4C7 294 aa9.07□□□□□ -0.96
PTCD3-201ENST00000254630 OSBPL8Q9BZF1 889 aa9.07□□□□□ -0.96
PTCD3-201ENST00000254630 SPATS2LQ9NUQ6 558 aaKnown RBP9.07□□□□□ -0.96
PTCD3-201ENST00000254630 STOML1Q9UBI4 398 aa9.07□□□□□ -0.96
PTCD3-201ENST00000254630 TUBE1Q9UJT0 475 aa9.07□□□□□ -0.96
PTCD3-201ENST00000254630 DCDC2CA8MYV0 355 aa9.07□□□□□ -0.96
PTCD3-201ENST00000254630 MYO1GB0I1T2 1018 aa9.07□□□□□ -0.96
PTCD3-201ENST00000254630 KPNA6O60684 536 aa9.07□□□□□ -0.96
PTCD3-201ENST00000254630 ANXA9O76027 345 aa9.07□□□□□ -0.96
PTCD3-201ENST00000254630 CYP2C8P10632 490 aa9.07□□□□□ -0.96
PTCD3-201ENST00000254630 COILP38432 576 aaPredicted RBP9.07□□□□□ -0.96
PTCD3-201ENST00000254630 MAGEA4P43358 317 aa9.07□□□□□ -0.96
PTCD3-201ENST00000254630 NPEPPSP55786 919 aa9.07□□□□□ -0.96
PTCD3-201ENST00000254630 PLD1Q13393 1074 aa9.07□□□□□ -0.96
PTCD3-201ENST00000254630 FBXO32Q969P5 355 aa9.07□□□□□ -0.96
PTCD3-201ENST00000254630 ZCWPW1Q9H0M4 648 aa9.07□□□□□ -0.96
PTCD3-201ENST00000254630 LATS2Q9NRM7 1088 aa9.07□□□□□ -0.96
PTCD3-201ENST00000254630 CRLS1Q9UJA2 301 aa9.07□□□□□ -0.96
PTCD3-201ENST00000254630 TRAF3IP3Q9Y228 551 aa9.07□□□□□ -0.96
PTCD3-201ENST00000254630 DCCP43146 1447 aa9.07□□□□□ -0.96
PTCD3-201ENST00000254630 HEATR9A2RTY3 570 aa9.07□□□□□ -0.96
PTCD3-201ENST00000254630 TBC1D4O60343 1298 aa9.07□□□□□ -0.96
PTCD3-201ENST00000254630 KRT4P19013 534 aa9.07□□□□□ -0.96
PTCD3-201ENST00000254630 PON1P27169 355 aa9.07□□□□□ -0.96
PTCD3-201ENST00000254630 MAGEA9P43362 315 aa9.07□□□□□ -0.96
PTCD3-201ENST00000254630 MAP3K7CLP57077 242 aa9.07□□□□□ -0.96
PTCD3-201ENST00000254630 ZBTB17Q13105 803 aa9.07□□□□□ -0.96
PTCD3-201ENST00000254630 EPC2Q52LR7 807 aa9.07□□□□□ -0.96
PTCD3-201ENST00000254630 C11orf96Q7Z7L8 435 aa9.07□□□□□ -0.96
PTCD3-201ENST00000254630 ERO1BQ86YB8 467 aa9.07□□□□□ -0.96
PTCD3-201ENST00000254630 ZNF513Q8N8E2 541 aaPredicted RBP9.07□□□□□ -0.96
PTCD3-201ENST00000254630 EPN3Q9H201 632 aa9.07□□□□□ -0.96
PTCD3-201ENST00000254630 EHD4Q9H223 541 aa9.07□□□□□ -0.96
PTCD3-201ENST00000254630 RBM12Q9NTZ6 932 aaKnown RBP9.07□□□□□ -0.96
PTCD3-201ENST00000254630 ARHGAP26Q9UNA1 814 aa9.07□□□□□ -0.96
PTCD3-201ENST00000254630 SPATA31D1Q6ZQQ2 1576 aa9.07□□□□□ -0.96
PTCD3-201ENST00000254630 GTPBP10A4D1E9 387 aaKnown RBP9.07□□□□□ -0.96
PTCD3-201ENST00000254630 SREBF1P36956 1147 aa9.07□□□□□ -0.96
PTCD3-201ENST00000254630 MDH1P40925 334 aaKnown RBP9.07□□□□□ -0.96
PTCD3-201ENST00000254630 POLD3Q15054 466 aaPredicted RBP9.07□□□□□ -0.96
PTCD3-201ENST00000254630 HORMAD1Q86X24 394 aa9.07□□□□□ -0.96
PTCD3-201ENST00000254630 ADAM33Q9BZ11 813 aa9.07□□□□□ -0.96
PTCD3-201ENST00000254630 ETNK1Q9HBU6 452 aa9.07□□□□□ -0.96
PTCD3-201ENST00000254630 SMARCAL1Q9NZC9 954 aa9.07□□□□□ -0.96
PTCD3-201ENST00000254630 ADAM21Q9UKJ8 722 aa9.07□□□□□ -0.96
PTCD3-201ENST00000254630 ARL2BPQ9Y2Y0 163 aa9.07□□□□□ -0.96
PTCD3-201ENST00000254630 CFAP99D6REC4 459 aa9.07□□□□□ -0.96
PTCD3-201ENST00000254630 FDPSP14324 419 aaKnown RBP9.07□□□□□ -0.96
PTCD3-201ENST00000254630 CYP11B2P19099 503 aa9.07□□□□□ -0.96
PTCD3-201ENST00000254630 KDSRQ06136 332 aa9.07□□□□□ -0.96
PTCD3-201ENST00000254630 HIST2H2ACQ16777 129 aaPredicted RBP9.07□□□□□ -0.96
PTCD3-201ENST00000254630 HIST2H2AA3Q6FI13 130 aa9.07□□□□□ -0.96
PTCD3-201ENST00000254630 GRAMD4Q6IC98 578 aa9.07□□□□□ -0.96
PTCD3-201ENST00000254630 ACER1Q8TDN7 264 aa9.07□□□□□ -0.96
PTCD3-201ENST00000254630 GMCL1Q96IK5 515 aa9.07□□□□□ -0.96
PTCD3-201ENST00000254630 PRG3Q9Y2Y8 225 aaPredicted RBP9.07□□□□□ -0.96
PTCD3-201ENST00000254630 ARP10275 920 aa9.06□□□□□ -0.96
PTCD3-201ENST00000254630 VDRP11473 427 aa9.06□□□□□ -0.96
PTCD3-201ENST00000254630 CKBP12277 381 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms