RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 MYH10P35580 1976 aa13.67□□□□□ -0.22
VPREB3-201ENST00000248948 TMEM221A6NGB7 291 aa13.66□□□□□ -0.22
VPREB3-201ENST00000248948 M0R296 226 aa13.66□□□□□ -0.22
VPREB3-201ENST00000248948 STX10O60499 249 aa13.66□□□□□ -0.22
VPREB3-201ENST00000248948 VNN1O95497 513 aa13.66□□□□□ -0.22
VPREB3-201ENST00000248948 ASS1P00966 412 aaKnown RBP13.66□□□□□ -0.22
VPREB3-201ENST00000248948 TRIM49P0CI25 452 aa13.66□□□□□ -0.22
VPREB3-201ENST00000248948 TRIM49CP0CI26 452 aa13.66□□□□□ -0.22
VPREB3-201ENST00000248948 CEBPBP17676 345 aa13.66□□□□□ -0.22
VPREB3-201ENST00000248948 CCNE1P24864 410 aa13.66□□□□□ -0.22
VPREB3-201ENST00000248948 SGSM1Q2NKQ1 1148 aa13.66□□□□□ -0.22
VPREB3-201ENST00000248948 FAM171BQ6P995 826 aa13.66□□□□□ -0.22
VPREB3-201ENST00000248948 ING5Q8WYH8 240 aa13.66□□□□□ -0.22
VPREB3-201ENST00000248948 CEP295NLQ96MC4 621 aa13.66□□□□□ -0.22
VPREB3-201ENST00000248948 LRRC3Q9BY71 257 aa13.66□□□□□ -0.22
VPREB3-201ENST00000248948 SNX25Q9H3E2 840 aa13.66□□□□□ -0.22
VPREB3-201ENST00000248948 TMEM8AQ9HCN3 771 aa13.66□□□□□ -0.22
VPREB3-201ENST00000248948 TMLHEQ9NVH6 421 aa13.66□□□□□ -0.22
VPREB3-201ENST00000248948 SLC27A5Q9Y2P5 690 aa13.66□□□□□ -0.22
VPREB3-201ENST00000248948 NUMBLQ9Y6R0 609 aa13.66□□□□□ -0.22
VPREB3-201ENST00000248948 MIA3Q5JRA6 1907 aa13.66□□□□□ -0.22
VPREB3-201ENST00000248948 TICRRQ7Z2Z1 1910 aa13.66□□□□□ -0.22
VPREB3-201ENST00000248948 ZDBF2Q9HCK1 2354 aa13.65□□□□□ -0.22
VPREB3-201ENST00000248948 BICDL2A1A5D9 508 aa13.65□□□□□ -0.22
VPREB3-201ENST00000248948 CLSTN1O94985 981 aa13.65□□□□□ -0.22
VPREB3-201ENST00000248948 SRFP11831 508 aa13.65□□□□□ -0.22
VPREB3-201ENST00000248948 BMP6P22004 513 aa13.65□□□□□ -0.22
VPREB3-201ENST00000248948 CCR2P41597 374 aa13.65□□□□□ -0.22
VPREB3-201ENST00000248948 MAGEA11P43364 429 aa13.65□□□□□ -0.22
VPREB3-201ENST00000248948 MXI1P50539 228 aa13.65□□□□□ -0.22
VPREB3-201ENST00000248948 PMS1P54277 932 aaKnown RBP13.65□□□□□ -0.22
VPREB3-201ENST00000248948 RPL10AP62906 217 aaKnown RBP13.65□□□□□ -0.22
VPREB3-201ENST00000248948 PPP3CAQ08209 521 aa13.65□□□□□ -0.22
VPREB3-201ENST00000248948 ANKRD40Q6AI12 368 aa13.65□□□□□ -0.22
VPREB3-201ENST00000248948 VSTM1Q6UX27 236 aa13.65□□□□□ -0.22
VPREB3-201ENST00000248948 SPATA2LQ8IUW3 424 aaPredicted RBP13.65□□□□□ -0.22
VPREB3-201ENST00000248948 MYLPFQ96A32 169 aa13.65□□□□□ -0.22
VPREB3-201ENST00000248948 FAXDC2Q96IV6 333 aa13.65□□□□□ -0.22
VPREB3-201ENST00000248948 CEP63Q96MT8 703 aa13.65□□□□□ -0.22
VPREB3-201ENST00000248948 GBP4Q96PP9 640 aa13.65□□□□□ -0.22
VPREB3-201ENST00000248948 GCNAQ96QF7 691 aa13.65□□□□□ -0.22
VPREB3-201ENST00000248948 MRPL45Q9BRJ2 306 aaKnown RBP13.65□□□□□ -0.22
VPREB3-201ENST00000248948 GPR88Q9GZN0 384 aa13.65□□□□□ -0.22
VPREB3-201ENST00000248948 SMYD3Q9H7B4 428 aa13.65□□□□□ -0.22
VPREB3-201ENST00000248948 NXF1Q9UBU9 619 aaKnown RBP13.65□□□□□ -0.22
VPREB3-201ENST00000248948 GTF3C4Q9UKN8 822 aa13.65□□□□□ -0.22
VPREB3-201ENST00000248948 TRIM49BA6NDI0 452 aa13.64□□□□□ -0.23
VPREB3-201ENST00000248948 HCRTO43612 131 aa13.64□□□□□ -0.23
VPREB3-201ENST00000248948 MOSPD3O75425 235 aa13.64□□□□□ -0.23
VPREB3-201ENST00000248948 ECI2O75521 394 aa13.64□□□□□ -0.23
VPREB3-201ENST00000248948 SOAT2O75908 522 aa13.64□□□□□ -0.23
VPREB3-201ENST00000248948 HLA-DRAP01903 254 aa13.64□□□□□ -0.23
VPREB3-201ENST00000248948 MYL4P12829 197 aa13.64□□□□□ -0.23
VPREB3-201ENST00000248948 CDC25CP30307 473 aa13.64□□□□□ -0.23
VPREB3-201ENST00000248948 GCLMP48507 274 aa13.64□□□□□ -0.23
VPREB3-201ENST00000248948 PSMC1P62191 440 aaKnown RBP13.64□□□□□ -0.23
VPREB3-201ENST00000248948 NOP14P78316 857 aaKnown RBP13.64□□□□□ -0.23
VPREB3-201ENST00000248948 KRT39Q6A163 491 aa13.64□□□□□ -0.23
VPREB3-201ENST00000248948 TTI2Q6NXR4 508 aa13.64□□□□□ -0.23
VPREB3-201ENST00000248948 DNAJB7Q7Z6W7 309 aaPredicted RBP13.64□□□□□ -0.23
VPREB3-201ENST00000248948 HS6ST3Q8IZP7 471 aa13.64□□□□□ -0.23
VPREB3-201ENST00000248948 SLC44A3Q8N4M1 653 aa13.64□□□□□ -0.23
VPREB3-201ENST00000248948 CCDC150Q8NCX0 1101 aa13.64□□□□□ -0.23
VPREB3-201ENST00000248948 OR6B3Q8NGW1 331 aa13.64□□□□□ -0.23
VPREB3-201ENST00000248948 SHKBP1Q8TBC3 707 aa13.64□□□□□ -0.23
VPREB3-201ENST00000248948 MYCBPAPQ8TBZ2 947 aa13.64□□□□□ -0.23
VPREB3-201ENST00000248948 FAM200AQ8TCP9 573 aa13.64□□□□□ -0.23
VPREB3-201ENST00000248948 TAS1R2Q8TE23 839 aa13.64□□□□□ -0.23
VPREB3-201ENST00000248948 FGF14Q92915 247 aa13.64□□□□□ -0.23
VPREB3-201ENST00000248948 TCEAL4Q96EI5 215 aa13.64□□□□□ -0.23
VPREB3-201ENST00000248948 TRMT2BQ96GJ1 504 aaKnown RBP13.64□□□□□ -0.23
VPREB3-201ENST00000248948 IPO9Q96P70 1041 aaKnown RBP13.64□□□□□ -0.23
VPREB3-201ENST00000248948 LPIN3Q9BQK8 851 aa13.64□□□□□ -0.23
VPREB3-201ENST00000248948 SMOC2Q9H3U7 446 aa13.64□□□□□ -0.23
VPREB3-201ENST00000248948 METTL14Q9HCE5 456 aaKnown RBP13.64□□□□□ -0.23
VPREB3-201ENST00000248948 CRTAC1Q9NQ79 661 aa13.64□□□□□ -0.23
VPREB3-201ENST00000248948 SLC2A4RGQ9NR83 387 aa13.64□□□□□ -0.23
VPREB3-201ENST00000248948 KIAA1468Q9P260 1216 aa13.64□□□□□ -0.23
VPREB3-201ENST00000248948 ZMYM5Q9UJ78 669 aa13.64□□□□□ -0.23
VPREB3-201ENST00000248948 NME7Q9Y5B8 376 aa13.64□□□□□ -0.23
VPREB3-201ENST00000248948 MYBPHLA2RUH7 354 aa13.63□□□□□ -0.23
VPREB3-201ENST00000248948 A8MXQ7 604 aa13.63□□□□□ -0.23
VPREB3-201ENST00000248948 PPP1R3GB7ZBB8 358 aa13.63□□□□□ -0.23
VPREB3-201ENST00000248948 NOL4O94818 638 aa13.63□□□□□ -0.23
VPREB3-201ENST00000248948 CSH1P0DML2 217 aa13.63□□□□□ -0.23
VPREB3-201ENST00000248948 CSH2P0DML3 217 aa13.63□□□□□ -0.23
VPREB3-201ENST00000248948 CD44P16070 742 aaKnown RBP13.63□□□□□ -0.23
VPREB3-201ENST00000248948 FCARP24071 287 aa13.63□□□□□ -0.23
VPREB3-201ENST00000248948 LMO2P25791 158 aa13.63□□□□□ -0.23
VPREB3-201ENST00000248948 GNL1P36915 607 aaPredicted RBP13.63□□□□□ -0.23
VPREB3-201ENST00000248948 ASPAP45381 313 aa13.63□□□□□ -0.23
VPREB3-201ENST00000248948 PAK1Q13153 545 aa13.63□□□□□ -0.23
VPREB3-201ENST00000248948 DCAF17Q5H9S7 520 aaPredicted RBP13.63□□□□□ -0.23
VPREB3-201ENST00000248948 PARM1Q6UWI2 310 aa13.63□□□□□ -0.23
VPREB3-201ENST00000248948 SCARA5Q6ZMJ2 495 aa13.63□□□□□ -0.23
VPREB3-201ENST00000248948 HFE2Q6ZVN8 426 aa13.63□□□□□ -0.23
VPREB3-201ENST00000248948 B3GALNT2Q8NCR0 500 aa13.63□□□□□ -0.23
VPREB3-201ENST00000248948 NELFBQ8WX92 580 aa13.63□□□□□ -0.23
VPREB3-201ENST00000248948 RSAD2Q8WXG1 361 aa13.63□□□□□ -0.23
VPREB3-201ENST00000248948 ELSPBP1Q96BH3 223 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms