RNA–Protein interactions for RNA: ENST00000245479.2

SOX9-201, Transcript of SRY-box 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX9, Length 3,935 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-201ENST00000245479 ATP5OP48047 213 aa12.1□□□□□ -0.47
SOX9-201ENST00000245479 DCAF12L1Q5VU92 463 aa12.1□□□□□ -0.47
SOX9-201ENST00000245479 LRRC74BQ6ZQY2 392 aa12.1□□□□□ -0.47
SOX9-201ENST00000245479 C15orf52Q6ZUT6 534 aaKnown RBP12.1□□□□□ -0.47
SOX9-201ENST00000245479 PRELID2Q8N945 189 aa12.1□□□□□ -0.47
SOX9-201ENST00000245479 FAM149B1Q96BN6 582 aa12.1□□□□□ -0.47
SOX9-201ENST00000245479 ZSWIM1Q9BR11 485 aa12.1□□□□□ -0.47
SOX9-201ENST00000245479 FAM49BQ9NUQ9 324 aa12.1□□□□□ -0.47
SOX9-201ENST00000245479 AGAP1Q9UPQ3 857 aa12.1□□□□□ -0.47
SOX9-201ENST00000245479 E7ENQ6 273 aa12.1□□□□□ -0.47
SOX9-201ENST00000245479 CHKAP35790 457 aa12.1□□□□□ -0.47
SOX9-201ENST00000245479 DSG1Q02413 1049 aa12.1□□□□□ -0.47
SOX9-201ENST00000245479 CYLC2Q14093 348 aaPredicted RBP12.1□□□□□ -0.47
SOX9-201ENST00000245479 EMC2Q15006 297 aa12.1□□□□□ -0.47
SOX9-201ENST00000245479 GRAMD4Q6IC98 578 aa12.1□□□□□ -0.47
SOX9-201ENST00000245479 OR6B2Q6IFH4 312 aa12.1□□□□□ -0.47
SOX9-201ENST00000245479 TTC27Q6P3X3 843 aa12.1□□□□□ -0.47
SOX9-201ENST00000245479 EXOC3L1Q86VI1 746 aa12.1□□□□□ -0.47
SOX9-201ENST00000245479 TRIM56Q9BRZ2 755 aaKnown RBP12.1□□□□□ -0.47
SOX9-201ENST00000245479 KIAA1683Q9H0B3 1180 aa12.1□□□□□ -0.47
SOX9-201ENST00000245479 RANBP17Q9H2T7 1088 aaKnown RBP12.1□□□□□ -0.47
SOX9-201ENST00000245479 GPATCH2LQ9NWQ4 482 aa12.1□□□□□ -0.47
SOX9-201ENST00000245479 NAALADL1Q9UQQ1 740 aa12.1□□□□□ -0.47
SOX9-201ENST00000245479 SPATA31A6Q5VVP1 1343 aa12.1□□□□□ -0.47
SOX9-201ENST00000245479 LIN7AO14910 233 aaPredicted RBP12.09□□□□□ -0.47
SOX9-201ENST00000245479 SLC16A3O15427 465 aaKnown RBP12.09□□□□□ -0.47
SOX9-201ENST00000245479 PSMA2P25787 234 aa12.09□□□□□ -0.47
SOX9-201ENST00000245479 ARSEP51690 589 aa12.09□□□□□ -0.47
SOX9-201ENST00000245479 TPD52P55327 224 aaPredicted RBP12.09□□□□□ -0.47
SOX9-201ENST00000245479 NCOA4Q13772 614 aa12.09□□□□□ -0.47
SOX9-201ENST00000245479 HIC1Q14526 733 aa12.09□□□□□ -0.47
SOX9-201ENST00000245479 ATG16L1Q676U5 607 aa12.09□□□□□ -0.47
SOX9-201ENST00000245479 ZNF280CQ8ND82 737 aa12.09□□□□□ -0.47
SOX9-201ENST00000245479 TTC8Q8TAM2 541 aa12.09□□□□□ -0.47
SOX9-201ENST00000245479 PXMP2Q9NR77 195 aa12.09□□□□□ -0.47
SOX9-201ENST00000245479 C5orf60A6NFR6 353 aa12.09□□□□□ -0.47
SOX9-201ENST00000245479 F8VP50 259 aa12.09□□□□□ -0.47
SOX9-201ENST00000245479 TTC4O95801 387 aa12.09□□□□□ -0.47
SOX9-201ENST00000245479 TCF4P15884 667 aa12.09□□□□□ -0.47
SOX9-201ENST00000245479 ADSSP30520 456 aa12.09□□□□□ -0.47
SOX9-201ENST00000245479 CIITAP33076 1130 aa12.09□□□□□ -0.47
SOX9-201ENST00000245479 ALDH18A1P54886 795 aaKnown RBP12.09□□□□□ -0.47
SOX9-201ENST00000245479 MYL6P60660 151 aa12.09□□□□□ -0.47
SOX9-201ENST00000245479 SLC34A1Q06495 639 aa12.09□□□□□ -0.47
SOX9-201ENST00000245479 ZNF568Q3ZCX4 644 aa12.09□□□□□ -0.47
SOX9-201ENST00000245479 NXNQ6DKJ4 435 aa12.09□□□□□ -0.47
SOX9-201ENST00000245479 WDR75Q8IWA0 830 aaKnown RBP12.09□□□□□ -0.47
SOX9-201ENST00000245479 FITM2Q8N6M3 262 aa12.09□□□□□ -0.47
SOX9-201ENST00000245479 CKAP2Q8WWK9 683 aa12.09□□□□□ -0.47
SOX9-201ENST00000245479 ATXN7L3BQ96GX2 97 aa12.09□□□□□ -0.47
SOX9-201ENST00000245479 ZNF570Q96NI8 536 aa12.09□□□□□ -0.47
SOX9-201ENST00000245479 IWS1Q96ST2 819 aa12.09□□□□□ -0.47
SOX9-201ENST00000245479 DDNO94850 711 aaPredicted RBP12.09□□□□□ -0.47
SOX9-201ENST00000245479 GH1P01241 217 aa12.09□□□□□ -0.47
SOX9-201ENST00000245479 NUDT17P0C025 328 aa12.09□□□□□ -0.47
SOX9-201ENST00000245479 STXBP2Q15833 593 aa12.09□□□□□ -0.47
SOX9-201ENST00000245479 SPRED3Q2MJR0 410 aa12.09□□□□□ -0.47
SOX9-201ENST00000245479 SPDYE2Q495Y8 402 aa12.09□□□□□ -0.47
SOX9-201ENST00000245479 SLC44A4Q53GD3 710 aa12.09□□□□□ -0.47
SOX9-201ENST00000245479 FBXO16Q8IX29 292 aaPredicted RBP12.09□□□□□ -0.47
SOX9-201ENST00000245479 PPWD1Q96BP3 646 aaKnown RBP12.09□□□□□ -0.47
SOX9-201ENST00000245479 SEL1LQ9UBV2 794 aa12.09□□□□□ -0.47
SOX9-201ENST00000245479 ZC3H4Q9UPT8 1303 aaKnown RBP12.08□□□□□ -0.47
SOX9-201ENST00000245479 VWA5AO00534 786 aa12.08□□□□□ -0.47
SOX9-201ENST00000245479 STAM2O75886 525 aa12.08□□□□□ -0.47
SOX9-201ENST00000245479 FESP07332 822 aa12.08□□□□□ -0.47
SOX9-201ENST00000245479 CYP3A7P24462 503 aa12.08□□□□□ -0.47
SOX9-201ENST00000245479 STAT5BP51692 787 aa12.08□□□□□ -0.47
SOX9-201ENST00000245479 KRT76Q01546 638 aa12.08□□□□□ -0.47
SOX9-201ENST00000245479 CFAP36Q96G28 342 aa12.08□□□□□ -0.47
SOX9-201ENST00000245479 RIT2Q99578 217 aa12.08□□□□□ -0.47
SOX9-201ENST00000245479 CCDC189A1A4V9 331 aa12.08□□□□□ -0.48
SOX9-201ENST00000245479 PHKA2P46019 1235 aa12.08□□□□□ -0.48
SOX9-201ENST00000245479 ARL4CP56559 192 aa12.08□□□□□ -0.48
SOX9-201ENST00000245479 BNIP1Q12981 228 aa12.08□□□□□ -0.48
SOX9-201ENST00000245479 IL31Q6EBC2 164 aa12.08□□□□□ -0.48
SOX9-201ENST00000245479 GPAT2Q6NUI2 795 aa12.08□□□□□ -0.48
SOX9-201ENST00000245479 FERMT1Q9BQL6 677 aa12.08□□□□□ -0.48
SOX9-201ENST00000245479 SLC13A1Q9BZW2 595 aa12.08□□□□□ -0.48
SOX9-201ENST00000245479 CYP26B1Q9NR63 512 aa12.08□□□□□ -0.48
SOX9-201ENST00000245479 NEU2Q9Y3R4 380 aa12.08□□□□□ -0.48
SOX9-201ENST00000245479 LAMB4A4D0S4 1761 aa12.08□□□□□ -0.48
SOX9-201ENST00000245479 KIAA0391O15091 583 aaKnown RBP12.08□□□□□ -0.48
SOX9-201ENST00000245479 PDGFRBP09619 1106 aa12.08□□□□□ -0.48
SOX9-201ENST00000245479 KRT4P19013 534 aa12.08□□□□□ -0.48
SOX9-201ENST00000245479 PHEXP78562 749 aa12.08□□□□□ -0.48
SOX9-201ENST00000245479 CYTH1Q15438 398 aa12.08□□□□□ -0.48
SOX9-201ENST00000245479 DCAF15Q66K64 600 aa12.08□□□□□ -0.48
SOX9-201ENST00000245479 LRRC57Q8N9N7 239 aa12.08□□□□□ -0.48
SOX9-201ENST00000245479 KCTD6Q8NC69 237 aa12.08□□□□□ -0.48
SOX9-201ENST00000245479 CPB2Q96IY4 423 aa12.08□□□□□ -0.48
SOX9-201ENST00000245479 CEP41Q9BYV8 373 aa12.08□□□□□ -0.48
SOX9-201ENST00000245479 SCINQ9Y6U3 715 aa12.08□□□□□ -0.48
SOX9-201ENST00000245479 TTLL13PA6NNM8 815 aa12.07□□□□□ -0.48
SOX9-201ENST00000245479 ETS2P15036 469 aa12.07□□□□□ -0.48
SOX9-201ENST00000245479 FMO1Q01740 532 aa12.07□□□□□ -0.48
SOX9-201ENST00000245479 MTFR1Q15390 333 aa12.07□□□□□ -0.48
SOX9-201ENST00000245479 ZNF699Q32M78 642 aa12.07□□□□□ -0.48
SOX9-201ENST00000245479 LRRC43Q8N309 656 aa12.07□□□□□ -0.48
SOX9-201ENST00000245479 AGR3Q8TD06 166 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms