RNA–Protein interactions for RNA: ENST00000238497.9

VPS4B-201, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS4B, Length 3,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-201ENST00000238497 SPG21Q9NZD8 308 aa9.21□□□□□ -0.94
VPS4B-201ENST00000238497 PPME1Q9Y570 386 aa9.21□□□□□ -0.94
VPS4B-201ENST00000238497 C2CD2LO14523 706 aa9.2□□□□□ -0.94
VPS4B-201ENST00000238497 LYPLA2O95372 231 aa9.2□□□□□ -0.94
VPS4B-201ENST00000238497 SP100P23497 879 aaPredicted RBP9.2□□□□□ -0.94
VPS4B-201ENST00000238497 MCM3P25205 808 aa9.2□□□□□ -0.94
VPS4B-201ENST00000238497 DNAJB1P25685 340 aa9.2□□□□□ -0.94
VPS4B-201ENST00000238497 OR1G1P47890 313 aa9.2□□□□□ -0.94
VPS4B-201ENST00000238497 RAB27AP51159 221 aa9.2□□□□□ -0.94
VPS4B-201ENST00000238497 PDE6CP51160 858 aa9.2□□□□□ -0.94
VPS4B-201ENST00000238497 MFAP3P55082 362 aa9.2□□□□□ -0.94
VPS4B-201ENST00000238497 MARSP56192 900 aaKnown RBP9.2□□□□□ -0.94
VPS4B-201ENST00000238497 FAM189BP81408 668 aa9.2□□□□□ -0.94
VPS4B-201ENST00000238497 MAPK6Q16659 721 aa9.2□□□□□ -0.94
VPS4B-201ENST00000238497 CFAP58Q5T655 872 aa9.2□□□□□ -0.94
VPS4B-201ENST00000238497 IFT20Q8IY31 132 aa9.2□□□□□ -0.94
VPS4B-201ENST00000238497 AUTS2Q8WXX7 1259 aa9.2□□□□□ -0.94
VPS4B-201ENST00000238497 CASD1Q96PB1 797 aa9.2□□□□□ -0.94
VPS4B-201ENST00000238497 RPS6KC1Q96S38 1066 aa9.2□□□□□ -0.94
VPS4B-201ENST00000238497 HEMGNQ9BXL5 484 aa9.2□□□□□ -0.94
VPS4B-201ENST00000238497 CCDC113Q9H0I3 377 aa9.2□□□□□ -0.94
VPS4B-201ENST00000238497 ELAC1Q9H777 363 aaKnown RBP9.2□□□□□ -0.94
VPS4B-201ENST00000238497 RC3H2Q9HBD1 1191 aaKnown RBP9.2□□□□□ -0.94
VPS4B-201ENST00000238497 AGO2Q9UKV8 859 aaKnown RBP9.2□□□□□ -0.94
VPS4B-201ENST00000238497 PCDHB4Q9Y5E5 795 aa9.2□□□□□ -0.94
VPS4B-201ENST00000238497 TTI1O43156 1089 aa9.2□□□□□ -0.94
VPS4B-201ENST00000238497 SART1O43290 800 aaKnown RBP9.2□□□□□ -0.94
VPS4B-201ENST00000238497 CD19P15391 556 aa9.2□□□□□ -0.94
VPS4B-201ENST00000238497 KCNJ1P48048 391 aa9.2□□□□□ -0.94
VPS4B-201ENST00000238497 MARCKSL1P49006 195 aa9.2□□□□□ -0.94
VPS4B-201ENST00000238497 ERVFC1P60507 584 aa9.2□□□□□ -0.94
VPS4B-201ENST00000238497 BMT2Q1RMZ1 405 aa9.2□□□□□ -0.94
VPS4B-201ENST00000238497 FAM182AQ5T1J6 154 aa9.2□□□□□ -0.94
VPS4B-201ENST00000238497 LEKR1Q6ZMV7 388 aa9.2□□□□□ -0.94
VPS4B-201ENST00000238497 ADGRD2Q7Z7M1 963 aa9.2□□□□□ -0.94
VPS4B-201ENST00000238497 FBXL13Q8NEE6 735 aa9.2□□□□□ -0.94
VPS4B-201ENST00000238497 RAB20Q9NX57 234 aa9.2□□□□□ -0.94
VPS4B-201ENST00000238497 NR2E1Q9Y466 385 aa9.2□□□□□ -0.94
VPS4B-201ENST00000238497 LINC01565O15544 149 aa9.2□□□□□ -0.94
VPS4B-201ENST00000238497 DAPK3O43293 454 aa9.2□□□□□ -0.94
VPS4B-201ENST00000238497 ATF7P17544 494 aaPredicted RBP9.2□□□□□ -0.94
VPS4B-201ENST00000238497 ARF4P18085 180 aaPredicted RBP9.2□□□□□ -0.94
VPS4B-201ENST00000238497 POU3F3P20264 500 aaPredicted RBP9.2□□□□□ -0.94
VPS4B-201ENST00000238497 PPM1AP35813 382 aa9.2□□□□□ -0.94
VPS4B-201ENST00000238497 MLH1P40692 756 aa9.2□□□□□ -0.94
VPS4B-201ENST00000238497 AFF1P51825 1210 aaKnown RBP9.2□□□□□ -0.94
VPS4B-201ENST00000238497 ZNF131P52739 623 aa9.2□□□□□ -0.94
VPS4B-201ENST00000238497 BCAR1P56945 870 aa9.2□□□□□ -0.94
VPS4B-201ENST00000238497 GABPB1Q06547 395 aaPredicted RBP9.2□□□□□ -0.94
VPS4B-201ENST00000238497 MEI1Q5TIA1 1274 aa9.2□□□□□ -0.94
VPS4B-201ENST00000238497 PARD3BQ8TEW8 1205 aa9.2□□□□□ -0.94
VPS4B-201ENST00000238497 SYN2Q92777 582 aaPredicted RBP9.2□□□□□ -0.94
VPS4B-201ENST00000238497 RPGRIP1Q96KN7 1286 aa9.2□□□□□ -0.94
VPS4B-201ENST00000238497 ZFP42Q96MM3 310 aa9.2□□□□□ -0.94
VPS4B-201ENST00000238497 ADPGKQ9BRR6 497 aa9.2□□□□□ -0.94
VPS4B-201ENST00000238497 RNF39Q9H2S5 420 aa9.2□□□□□ -0.94
VPS4B-201ENST00000238497 TBC1D13Q9NVG8 400 aa9.2□□□□□ -0.94
VPS4B-201ENST00000238497 KLHL11Q9NVR0 708 aa9.2□□□□□ -0.94
VPS4B-201ENST00000238497 RBAKQ9NYW8 714 aaPredicted RBP9.2□□□□□ -0.94
VPS4B-201ENST00000238497 ALG6Q9Y672 507 aa9.2□□□□□ -0.94
VPS4B-201ENST00000238497 ZDBF2Q9HCK1 2354 aa9.19□□□□□ -0.94
VPS4B-201ENST00000238497 MUC3AQ02505 3323 aa9.19□□□□□ -0.94
VPS4B-201ENST00000238497 PGRMC1O00264 195 aaKnown RBP9.19□□□□□ -0.94
VPS4B-201ENST00000238497 PIK3R2O00459 728 aa9.19□□□□□ -0.94
VPS4B-201ENST00000238497 CLDN3O15551 220 aa9.19□□□□□ -0.94
VPS4B-201ENST00000238497 TSPAN1O60635 241 aa9.19□□□□□ -0.94
VPS4B-201ENST00000238497 PRKCBP05771 671 aa9.19□□□□□ -0.94
VPS4B-201ENST00000238497 IL9P15248 144 aa9.19□□□□□ -0.94
VPS4B-201ENST00000238497 PTPRSQ13332 1948 aa9.19□□□□□ -0.94
VPS4B-201ENST00000238497 PPP2R5AQ15172 486 aa9.19□□□□□ -0.94
VPS4B-201ENST00000238497 KAZNQ674X7 775 aa9.19□□□□□ -0.94
VPS4B-201ENST00000238497 NOP9Q86U38 636 aaKnown RBP9.19□□□□□ -0.94
VPS4B-201ENST00000238497 GPD1LQ8N335 351 aa9.19□□□□□ -0.94
VPS4B-201ENST00000238497 KIFAP3Q92845 792 aa9.19□□□□□ -0.94
VPS4B-201ENST00000238497 C11orf70Q9BRQ4 267 aa9.19□□□□□ -0.94
VPS4B-201ENST00000238497 TRIM7Q9C029 511 aa9.19□□□□□ -0.94
VPS4B-201ENST00000238497 LMAN2LQ9H0V9 348 aa9.19□□□□□ -0.94
VPS4B-201ENST00000238497 NXF3Q9H4D5 531 aaKnown RBP9.19□□□□□ -0.94
VPS4B-201ENST00000238497 C5orf42Q9H799 3197 aa9.19□□□□□ -0.94
VPS4B-201ENST00000238497 KCND2Q9NZV8 630 aa9.19□□□□□ -0.94
VPS4B-201ENST00000238497 RSPH14Q9UHP6 348 aa9.19□□□□□ -0.94
VPS4B-201ENST00000238497 BARX2Q9UMQ3 279 aaPredicted RBP9.19□□□□□ -0.94
VPS4B-201ENST00000238497 IPPQ9Y573 584 aa9.19□□□□□ -0.94
VPS4B-201ENST00000238497 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.19□□□□□ -0.94
VPS4B-201ENST00000238497 GOLGA6CA6NDK9 693 aa9.19□□□□□ -0.94
VPS4B-201ENST00000238497 TTLL13PA6NNM8 815 aa9.19□□□□□ -0.94
VPS4B-201ENST00000238497 GOLGA6DP0CG33 693 aa9.19□□□□□ -0.94
VPS4B-201ENST00000238497 HOXA11P31270 313 aaPredicted RBP9.19□□□□□ -0.94
VPS4B-201ENST00000238497 ARL2P36404 184 aa9.19□□□□□ -0.94
VPS4B-201ENST00000238497 SCNN1GP51170 649 aa9.19□□□□□ -0.94
VPS4B-201ENST00000238497 DLX2Q07687 328 aaPredicted RBP9.19□□□□□ -0.94
VPS4B-201ENST00000238497 IFFO1Q0D2I5 559 aa9.19□□□□□ -0.94
VPS4B-201ENST00000238497 HYAL1Q12794 435 aa9.19□□□□□ -0.94
VPS4B-201ENST00000238497 SCARA3Q6AZY7 606 aa9.19□□□□□ -0.94
VPS4B-201ENST00000238497 KIAA1841Q6NSI8 718 aa9.19□□□□□ -0.94
VPS4B-201ENST00000238497 ZNF280BQ86YH2 543 aa9.19□□□□□ -0.94
VPS4B-201ENST00000238497 VPS52Q8N1B4 723 aa9.19□□□□□ -0.94
VPS4B-201ENST00000238497 KRT35Q92764 455 aa9.19□□□□□ -0.94
VPS4B-201ENST00000238497 KREMEN1Q96MU8 473 aa9.19□□□□□ -0.94
VPS4B-201ENST00000238497 MKNK1Q9BUB5 465 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms