RNA–Protein interactions for RNA: ENST00000238112.7

CPSF3-201, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-201ENST00000238112 ANKMY2Q8IV38 441 aa19.7■□□□□ 0.74
CPSF3-201ENST00000238112 ANKLE1Q8NAG6 615 aa19.7■□□□□ 0.74
CPSF3-201ENST00000238112 ERP27Q96DN0 273 aa19.7■□□□□ 0.74
CPSF3-201ENST00000238112 RSRC1Q96IZ7 334 aaKnown RBP19.7■□□□□ 0.74
CPSF3-201ENST00000238112 MYLK2Q9H1R3 596 aa19.7■□□□□ 0.74
CPSF3-201ENST00000238112 NRBP2Q9NSY0 501 aa19.7■□□□□ 0.74
CPSF3-201ENST00000238112 NOP53Q9NZM5 478 aaKnown RBP19.7■□□□□ 0.74
CPSF3-201ENST00000238112 A8MUI8 341 aa19.7■□□□□ 0.74
CPSF3-201ENST00000238112 ATP5HO75947 161 aa19.7■□□□□ 0.74
CPSF3-201ENST00000238112 ANP32DO95626 131 aa19.7■□□□□ 0.74
CPSF3-201ENST00000238112 RPSAP08865 295 aaKnown RBP19.7■□□□□ 0.74
CPSF3-201ENST00000238112 PSMA2P25787 234 aa19.7■□□□□ 0.74
CPSF3-201ENST00000238112 ALDH3A1P30838 453 aa19.7■□□□□ 0.74
CPSF3-201ENST00000238112 PHBP35232 272 aa19.7■□□□□ 0.74
CPSF3-201ENST00000238112 YARSP54577 528 aaKnown RBP19.7■□□□□ 0.74
CPSF3-201ENST00000238112 DUOXA2Q1HG44 320 aa19.7■□□□□ 0.74
CPSF3-201ENST00000238112 AEBP2Q6ZN18 517 aaPredicted RBP19.7■□□□□ 0.74
CPSF3-201ENST00000238112 POLNQ7Z5Q5 900 aa19.7■□□□□ 0.74
CPSF3-201ENST00000238112 L3MBTL3Q96JM7 780 aaPredicted RBP19.7■□□□□ 0.74
CPSF3-201ENST00000238112 LRRC37BQ96QE4 947 aa19.7■□□□□ 0.74
CPSF3-201ENST00000238112 MRPL4Q9BYD3 311 aaKnown RBP19.7■□□□□ 0.74
CPSF3-201ENST00000238112 SLCO1B3Q9NPD5 702 aa19.7■□□□□ 0.74
CPSF3-201ENST00000238112 STRIP2Q9ULQ0 834 aa19.7■□□□□ 0.74
CPSF3-201ENST00000238112 C19orf81C9J6K1 198 aa19.69■□□□□ 0.74
CPSF3-201ENST00000238112 TOM1L1O75674 476 aa19.69■□□□□ 0.74
CPSF3-201ENST00000238112 CTCFP49711 727 aaPredicted RBP19.69■□□□□ 0.74
CPSF3-201ENST00000238112 GEMIN4P57678 1058 aaKnown RBP19.69■□□□□ 0.74
CPSF3-201ENST00000238112 RASA2Q15283 850 aa19.69■□□□□ 0.74
CPSF3-201ENST00000238112 SCARA5Q6ZMJ2 495 aa19.69■□□□□ 0.74
CPSF3-201ENST00000238112 SLC35B2Q8TB61 432 aa19.69■□□□□ 0.74
CPSF3-201ENST00000238112 ZWILCHQ9H900 591 aa19.69■□□□□ 0.74
CPSF3-201ENST00000238112 PCDHGC3Q9UN70 934 aa19.69■□□□□ 0.74
CPSF3-201ENST00000238112 SIP14410 1827 aa19.69■□□□□ 0.74
CPSF3-201ENST00000238112 TTLL13PA6NNM8 815 aa19.69■□□□□ 0.74
CPSF3-201ENST00000238112 EDF1O60869 148 aaKnown RBP19.69■□□□□ 0.74
CPSF3-201ENST00000238112 DCTN3O75935 186 aa19.69■□□□□ 0.74
CPSF3-201ENST00000238112 WEE2P0C1S8 567 aa19.69■□□□□ 0.74
CPSF3-201ENST00000238112 EFNA5P52803 228 aa19.69■□□□□ 0.74
CPSF3-201ENST00000238112 ARL4CP56559 192 aa19.69■□□□□ 0.74
CPSF3-201ENST00000238112 MOGSQ13724 837 aa19.69■□□□□ 0.74
CPSF3-201ENST00000238112 ZNF772Q68DY9 489 aaPredicted RBP19.69■□□□□ 0.74
CPSF3-201ENST00000238112 TLDC1Q6P9B6 456 aa19.69■□□□□ 0.74
CPSF3-201ENST00000238112 CATSPERGQ6ZRH7 1159 aa19.69■□□□□ 0.74
CPSF3-201ENST00000238112 PPIL6Q8IXY8 311 aa19.69■□□□□ 0.74
CPSF3-201ENST00000238112 MICALL2Q8IY33 904 aa19.69■□□□□ 0.74
CPSF3-201ENST00000238112 WDTC1Q8N5D0 677 aa19.69■□□□□ 0.74
CPSF3-201ENST00000238112 PYROXD1Q8WU10 500 aa19.69■□□□□ 0.74
CPSF3-201ENST00000238112 PDGFDQ9GZP0 370 aaPredicted RBP19.69■□□□□ 0.74
CPSF3-201ENST00000238112 GRID1Q9ULK0 1009 aa19.69■□□□□ 0.74
CPSF3-201ENST00000238112 C15orf41Q9Y2V0 281 aa19.69■□□□□ 0.74
CPSF3-201ENST00000238112 DOCK1Q14185 1865 aa19.69■□□□□ 0.74
CPSF3-201ENST00000238112 IGKV6D-21A0A0A0MT36 114 aa19.68■□□□□ 0.74
CPSF3-201ENST00000238112 BANF1O75531 89 aa19.68■□□□□ 0.74
CPSF3-201ENST00000238112 KRT7P08729 469 aa19.68■□□□□ 0.74
CPSF3-201ENST00000238112 RPS12P25398 132 aaKnown RBP19.68■□□□□ 0.74
CPSF3-201ENST00000238112 POLR2BP30876 1174 aaKnown RBP19.68■□□□□ 0.74
CPSF3-201ENST00000238112 CDH5P33151 784 aaPredicted RBP19.68■□□□□ 0.74
CPSF3-201ENST00000238112 OTUD4Q01804 1114 aaKnown RBP19.68■□□□□ 0.74
CPSF3-201ENST00000238112 SLC1A5Q15758 541 aa19.68■□□□□ 0.74
CPSF3-201ENST00000238112 SMTNL2Q2TAL5 461 aa19.68■□□□□ 0.74
CPSF3-201ENST00000238112 ZNF699Q32M78 642 aa19.68■□□□□ 0.74
CPSF3-201ENST00000238112 ATP11CQ8NB49 1132 aa19.68■□□□□ 0.74
CPSF3-201ENST00000238112 TTC13Q8NBP0 860 aa19.68■□□□□ 0.74
CPSF3-201ENST00000238112 DNERQ8NFT8 737 aa19.68■□□□□ 0.74
CPSF3-201ENST00000238112 ACTL9Q8TC94 416 aa19.68■□□□□ 0.74
CPSF3-201ENST00000238112 NSMCE1Q8WV22 266 aa19.68■□□□□ 0.74
CPSF3-201ENST00000238112 TFAP2BQ92481 460 aa19.68■□□□□ 0.74
CPSF3-201ENST00000238112 ADAM33Q9BZ11 813 aa19.68■□□□□ 0.74
CPSF3-201ENST00000238112 FARP1Q9Y4F1 1045 aaPredicted RBP19.68■□□□□ 0.74
CPSF3-201ENST00000238112 A0A1W2PPM1 405 aa19.68■□□□□ 0.74
CPSF3-201ENST00000238112 TYROBPO43914 113 aa19.68■□□□□ 0.74
CPSF3-201ENST00000238112 KRT4P19013 534 aa19.68■□□□□ 0.74
CPSF3-201ENST00000238112 TFAMQ00059 246 aaKnown RBP19.68■□□□□ 0.74
CPSF3-201ENST00000238112 SURF1Q15526 300 aa19.68■□□□□ 0.74
CPSF3-201ENST00000238112 TARBP2Q15633 366 aaKnown RBP19.68■□□□□ 0.74
CPSF3-201ENST00000238112 HADHQ16836 314 aaKnown RBP19.68■□□□□ 0.74
CPSF3-201ENST00000238112 EFHC2Q5JST6 749 aa19.68■□□□□ 0.74
CPSF3-201ENST00000238112 PRPF31Q8WWY3 499 aaKnown RBP19.68■□□□□ 0.74
CPSF3-201ENST00000238112 RSAD2Q8WXG1 361 aa19.68■□□□□ 0.74
CPSF3-201ENST00000238112 MAF1Q9H063 256 aa19.68■□□□□ 0.74
CPSF3-201ENST00000238112 SAE1Q9UBE0 346 aaPredicted RBP19.68■□□□□ 0.74
CPSF3-201ENST00000238112 ZNF112Q9UJU3 913 aa19.68■□□□□ 0.74
CPSF3-201ENST00000238112 CHKBQ9Y259 395 aa19.68■□□□□ 0.74
CPSF3-201ENST00000238112 EFR3BQ9Y2G0 817 aa19.68■□□□□ 0.74
CPSF3-201ENST00000238112 RLFQ13129 1914 aa19.67■□□□□ 0.74
CPSF3-201ENST00000238112 C3orf70A6NLC5 250 aaPredicted RBP19.67■□□□□ 0.74
CPSF3-201ENST00000238112 OGTO15294 1046 aa19.67■□□□□ 0.74
CPSF3-201ENST00000238112 FAM189A1O60320 539 aa19.67■□□□□ 0.74
CPSF3-201ENST00000238112 ZWINTO95229 277 aa19.67■□□□□ 0.74
CPSF3-201ENST00000238112 KRT3P12035 628 aa19.67■□□□□ 0.74
CPSF3-201ENST00000238112 UBA1P22314 1058 aaKnown RBP19.67■□□□□ 0.74
CPSF3-201ENST00000238112 RFC1P35251 1148 aaPredicted RBP19.67■□□□□ 0.74
CPSF3-201ENST00000238112 STAT5BP51692 787 aa19.67■□□□□ 0.74
CPSF3-201ENST00000238112 CLNS1AP54105 237 aaKnown RBP19.67■□□□□ 0.74
CPSF3-201ENST00000238112 GPX6P59796 221 aa19.67■□□□□ 0.74
CPSF3-201ENST00000238112 CNTN2Q02246 1040 aa19.67■□□□□ 0.74
CPSF3-201ENST00000238112 EN1Q05925 392 aaPredicted RBP19.67■□□□□ 0.74
CPSF3-201ENST00000238112 FSTL1Q12841 308 aa19.67■□□□□ 0.74
CPSF3-201ENST00000238112 SEPT7Q16181 437 aaKnown RBP19.67■□□□□ 0.74
CPSF3-201ENST00000238112 FAM160B1Q5W0V3 765 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms