RNA–Protein interactions for RNA: ENST00000218388.8

TIMP1-201, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP1, Length 892 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-201ENST00000218388 MAFFQ9ULX9 164 aa14.02□□□□□ -0.17
TIMP1-201ENST00000218388 CAPN11Q9UMQ6 739 aa14.02□□□□□ -0.17
TIMP1-201ENST00000218388 LUC7L2Q9Y383 392 aaKnown RBP14.02□□□□□ -0.17
TIMP1-201ENST00000218388 HIDE1A8MVS5 230 aa14.01□□□□□ -0.17
TIMP1-201ENST00000218388 FOXN3O00409 490 aaPredicted RBP14.01□□□□□ -0.17
TIMP1-201ENST00000218388 MED7O43513 233 aa14.01□□□□□ -0.17
TIMP1-201ENST00000218388 C1RP00736 705 aa14.01□□□□□ -0.17
TIMP1-201ENST00000218388 VDRP11473 427 aa14.01□□□□□ -0.17
TIMP1-201ENST00000218388 CD19P15391 556 aa14.01□□□□□ -0.17
TIMP1-201ENST00000218388 RPL17P18621 184 aaKnown RBP14.01□□□□□ -0.17
TIMP1-201ENST00000218388 ZNF132P52740 706 aa14.01□□□□□ -0.17
TIMP1-201ENST00000218388 RAD23BP54727 409 aa14.01□□□□□ -0.17
TIMP1-201ENST00000218388 ZBED6P86452 979 aa14.01□□□□□ -0.17
TIMP1-201ENST00000218388 ROR1Q01973 937 aa14.01□□□□□ -0.17
TIMP1-201ENST00000218388 GPR17Q13304 367 aa14.01□□□□□ -0.17
TIMP1-201ENST00000218388 RAB33AQ14088 237 aa14.01□□□□□ -0.17
TIMP1-201ENST00000218388 STILQ15468 1287 aa14.01□□□□□ -0.17
TIMP1-201ENST00000218388 TSR1Q2NL82 804 aaKnown RBP14.01□□□□□ -0.17
TIMP1-201ENST00000218388 SLC39A12Q504Y0 691 aa14.01□□□□□ -0.17
TIMP1-201ENST00000218388 MDH1BQ5I0G3 518 aa14.01□□□□□ -0.17
TIMP1-201ENST00000218388 FAM171BQ6P995 826 aa14.01□□□□□ -0.17
TIMP1-201ENST00000218388 GLYCTKQ8IVS8 523 aa14.01□□□□□ -0.17
TIMP1-201ENST00000218388 FAM71AQ8IYT1 594 aa14.01□□□□□ -0.17
TIMP1-201ENST00000218388 SLC4A11Q8NBS3 891 aa14.01□□□□□ -0.17
TIMP1-201ENST00000218388 ZNF461Q8TAF7 563 aa14.01□□□□□ -0.17
TIMP1-201ENST00000218388 MYCBPAPQ8TBZ2 947 aa14.01□□□□□ -0.17
TIMP1-201ENST00000218388 CPLX3Q8WVH0 158 aa14.01□□□□□ -0.17
TIMP1-201ENST00000218388 TWNKQ96RR1 684 aa14.01□□□□□ -0.17
TIMP1-201ENST00000218388 DPEP3Q9H4B8 488 aa14.01□□□□□ -0.17
TIMP1-201ENST00000218388 TLE6Q9H808 572 aa14.01□□□□□ -0.17
TIMP1-201ENST00000218388 AFF4Q9UHB7 1163 aaKnown RBP14.01□□□□□ -0.17
TIMP1-201ENST00000218388 ATG2AQ2TAZ0 1938 aa14.01□□□□□ -0.17
TIMP1-201ENST00000218388 HCRTO43612 131 aa14□□□□□ -0.17
TIMP1-201ENST00000218388 GLUD1P00367 558 aa14□□□□□ -0.17
TIMP1-201ENST00000218388 GYPCP04921 128 aa14□□□□□ -0.17
TIMP1-201ENST00000218388 OR4Q2P0C623 313 aa14□□□□□ -0.17
TIMP1-201ENST00000218388 FERP16591 822 aa14□□□□□ -0.17
TIMP1-201ENST00000218388 GNA15P30679 374 aa14□□□□□ -0.17
TIMP1-201ENST00000218388 CASP14P31944 242 aa14□□□□□ -0.17
TIMP1-201ENST00000218388 ELF1P32519 619 aa14□□□□□ -0.17
TIMP1-201ENST00000218388 PDE6CP51160 858 aa14□□□□□ -0.17
TIMP1-201ENST00000218388 CYP27A1Q02318 531 aa14□□□□□ -0.17
TIMP1-201ENST00000218388 ORC1Q13415 861 aa14□□□□□ -0.17
TIMP1-201ENST00000218388 SGO2Q562F6 1265 aa14□□□□□ -0.17
TIMP1-201ENST00000218388 SFMBT2Q5VUG0 894 aa14□□□□□ -0.17
TIMP1-201ENST00000218388 SPATA2LQ8IUW3 424 aaPredicted RBP14□□□□□ -0.17
TIMP1-201ENST00000218388 CNGA4Q8IV77 575 aa14□□□□□ -0.17
TIMP1-201ENST00000218388 SPPL2BQ8TCT7 592 aa14□□□□□ -0.17
TIMP1-201ENST00000218388 BAP1Q92560 729 aa14□□□□□ -0.17
TIMP1-201ENST00000218388 MYLPFQ96A32 169 aa14□□□□□ -0.17
TIMP1-201ENST00000218388 FUBP3Q96I24 572 aaKnown RBP eCLIP14□□□□□ -0.17
TIMP1-201ENST00000218388 FAM161BQ96MY7 647 aa14□□□□□ -0.17
TIMP1-201ENST00000218388 TMEM209Q96SK2 561 aa14□□□□□ -0.17
TIMP1-201ENST00000218388 MED10Q9BTT4 135 aa14□□□□□ -0.17
TIMP1-201ENST00000218388 GPR88Q9GZN0 384 aa14□□□□□ -0.17
TIMP1-201ENST00000218388 ABCB6Q9NP58 842 aa14□□□□□ -0.17
TIMP1-201ENST00000218388 CRTAC1Q9NQ79 661 aa14□□□□□ -0.17
TIMP1-201ENST00000218388 GTF3C4Q9UKN8 822 aa14□□□□□ -0.17
TIMP1-201ENST00000218388 NME7Q9Y5B8 376 aa14□□□□□ -0.17
TIMP1-201ENST00000218388 PCDHB5Q9Y5E4 795 aa14□□□□□ -0.17
TIMP1-201ENST00000218388 WDR27A2RRH5 827 aa13.99□□□□□ -0.17
TIMP1-201ENST00000218388 MYBPHLA2RUH7 354 aa13.99□□□□□ -0.17
TIMP1-201ENST00000218388 LRRC53A6NM62 1247 aa13.99□□□□□ -0.17
TIMP1-201ENST00000218388 CYP26A1O43174 497 aa13.99□□□□□ -0.17
TIMP1-201ENST00000218388 ADAM12O43184 909 aa13.99□□□□□ -0.17
TIMP1-201ENST00000218388 CLASP2O75122 1294 aaKnown RBP13.99□□□□□ -0.17
TIMP1-201ENST00000218388 ATP2C2O75185 946 aa13.99□□□□□ -0.17
TIMP1-201ENST00000218388 GFPT2O94808 682 aa13.99□□□□□ -0.17
TIMP1-201ENST00000218388 PNMA6AP0CW24 399 aaPredicted RBP13.99□□□□□ -0.17
TIMP1-201ENST00000218388 SRGAP2BP0DMP2 458 aa13.99□□□□□ -0.17
TIMP1-201ENST00000218388 POU3F3P20264 500 aaPredicted RBP13.99□□□□□ -0.17
TIMP1-201ENST00000218388 IGFBP4P22692 258 aa13.99□□□□□ -0.17
TIMP1-201ENST00000218388 KRT9P35527 623 aa13.99□□□□□ -0.17
TIMP1-201ENST00000218388 SLC8A3P57103 927 aa13.99□□□□□ -0.17
TIMP1-201ENST00000218388 ASIC2Q16515 512 aa13.99□□□□□ -0.17
TIMP1-201ENST00000218388 DUSP6Q16828 381 aa13.99□□□□□ -0.17
TIMP1-201ENST00000218388 CFAP221Q4G0U5 840 aa13.99□□□□□ -0.17
TIMP1-201ENST00000218388 ARHGAP17Q68EM7 881 aa13.99□□□□□ -0.17
TIMP1-201ENST00000218388 RSPO2Q6UXX9 243 aaPredicted RBP13.99□□□□□ -0.17
TIMP1-201ENST00000218388 PALB2Q86YC2 1186 aa13.99□□□□□ -0.17
TIMP1-201ENST00000218388 SYN2Q92777 582 aaPredicted RBP13.99□□□□□ -0.17
TIMP1-201ENST00000218388 CYFIP2Q96F07 1278 aa13.99□□□□□ -0.17
TIMP1-201ENST00000218388 PCED1BQ96HM7 432 aa13.99□□□□□ -0.17
TIMP1-201ENST00000218388 PKMYT1Q99640 499 aa13.99□□□□□ -0.17
TIMP1-201ENST00000218388 ZNHIT6Q9NWK9 470 aaKnown RBP13.99□□□□□ -0.17
TIMP1-201ENST00000218388 ABI2Q9NYB9 513 aaPredicted RBP13.99□□□□□ -0.17
TIMP1-201ENST00000218388 IMPACTQ9P2X3 320 aa13.99□□□□□ -0.17
TIMP1-201ENST00000218388 HSFX1Q9UBD0 423 aa13.99□□□□□ -0.17
TIMP1-201ENST00000218388 HESX1Q9UBX0 185 aa13.99□□□□□ -0.17
TIMP1-201ENST00000218388 PCDHGC5Q9Y5F6 944 aa13.99□□□□□ -0.17
TIMP1-201ENST00000218388 CHD9Q3L8U1 2897 aa13.98□□□□□ -0.17
TIMP1-201ENST00000218388 LAMA2P24043 3122 aaKnown RBP13.98□□□□□ -0.17
TIMP1-201ENST00000218388 MTMR11A4FU01 709 aa13.98□□□□□ -0.17
TIMP1-201ENST00000218388 AKR1B15C9JRZ8 316 aaPredicted RBP13.98□□□□□ -0.17
TIMP1-201ENST00000218388 RNF225M0QZC1 329 aaPredicted RBP13.98□□□□□ -0.17
TIMP1-201ENST00000218388 THAP12O43422 761 aa13.98□□□□□ -0.17
TIMP1-201ENST00000218388 TGM5O43548 720 aa13.98□□□□□ -0.17
TIMP1-201ENST00000218388 MFAP3LO75121 409 aa13.98□□□□□ -0.17
TIMP1-201ENST00000218388 ABLIM3O94929 683 aa13.98□□□□□ -0.17
TIMP1-201ENST00000218388 ATF2P15336 505 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms