RNA–Protein interactions for RNA: ENST00000216456.6

VTI1B-201, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 1 (best)

Gene VTI1B, Length 1,103 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-201ENST00000216456 DMXL1Q9Y485 3027 aa23.78■■□□□ 1.4
VTI1B-201ENST00000216456 MYBPHLA2RUH7 354 aa23.78■■□□□ 1.4
VTI1B-201ENST00000216456 AFMP43652 599 aa23.78■■□□□ 1.4
VTI1B-201ENST00000216456 RPS9P46781 194 aaKnown RBP23.78■■□□□ 1.4
VTI1B-201ENST00000216456 TSPY1Q01534 308 aa23.78■■□□□ 1.4
VTI1B-201ENST00000216456 DNM1Q05193 864 aaKnown RBP23.78■■□□□ 1.4
VTI1B-201ENST00000216456 CUL4BQ13620 913 aa23.78■■□□□ 1.4
VTI1B-201ENST00000216456 INTS6LQ5JSJ4 861 aaKnown RBP23.78■■□□□ 1.4
VTI1B-201ENST00000216456 ADGRF2Q8IZF7 708 aa23.78■■□□□ 1.4
VTI1B-201ENST00000216456 SCFD1Q8WVM8 642 aa23.78■■□□□ 1.4
VTI1B-201ENST00000216456 TASP1Q9H6P5 420 aa23.78■■□□□ 1.4
VTI1B-201ENST00000216456 AGPAT3Q9NRZ7 376 aa23.78■■□□□ 1.4
VTI1B-201ENST00000216456 GDAP2Q9NXN4 497 aa23.78■■□□□ 1.4
VTI1B-201ENST00000216456 ZNF292O60281 2723 aa23.78■■□□□ 1.4
VTI1B-201ENST00000216456 FANCMQ8IYD8 2048 aa23.77■■□□□ 1.4
VTI1B-201ENST00000216456 ZNF233A6NK53 670 aa23.77■■□□□ 1.4
VTI1B-201ENST00000216456 MAN2B1O00754 1011 aa23.77■■□□□ 1.4
VTI1B-201ENST00000216456 DPYSL4O14531 572 aa23.77■■□□□ 1.4
VTI1B-201ENST00000216456 CHADO15335 359 aa23.77■■□□□ 1.4
VTI1B-201ENST00000216456 F11P03951 625 aa23.77■■□□□ 1.4
VTI1B-201ENST00000216456 HSP90AA1P07900 732 aaKnown RBP23.77■■□□□ 1.4
VTI1B-201ENST00000216456 CHRNB1P11230 501 aa23.77■■□□□ 1.4
VTI1B-201ENST00000216456 LMO2P25791 158 aa23.77■■□□□ 1.4
VTI1B-201ENST00000216456 ME1P48163 572 aa23.77■■□□□ 1.4
VTI1B-201ENST00000216456 CYP2J2P51589 502 aa23.77■■□□□ 1.4
VTI1B-201ENST00000216456 NLRP12P59046 1061 aa23.77■■□□□ 1.4
VTI1B-201ENST00000216456 PSMC1P62191 440 aaKnown RBP23.77■■□□□ 1.4
VTI1B-201ENST00000216456 EHHADHQ08426 723 aa23.77■■□□□ 1.4
VTI1B-201ENST00000216456 TAF12Q16514 161 aa23.77■■□□□ 1.4
VTI1B-201ENST00000216456 ARHGAP15Q53QZ3 475 aa23.77■■□□□ 1.4
VTI1B-201ENST00000216456 TXNDC8Q6A555 127 aa23.77■■□□□ 1.4
VTI1B-201ENST00000216456 MAB21L3Q8N8X9 362 aa23.77■■□□□ 1.4
VTI1B-201ENST00000216456 SUMF1Q8NBK3 374 aa23.77■■□□□ 1.4
VTI1B-201ENST00000216456 ZNF507Q8TCN5 953 aa23.77■■□□□ 1.4
VTI1B-201ENST00000216456 CSGALNACT1Q8TDX6 532 aa23.77■■□□□ 1.4
VTI1B-201ENST00000216456 C2orf15Q8WU43 125 aaKnown RBP23.77■■□□□ 1.4
VTI1B-201ENST00000216456 KBTBD7Q8WVZ9 684 aa23.77■■□□□ 1.4
VTI1B-201ENST00000216456 CHRDQ9H2X0 955 aa23.77■■□□□ 1.4
VTI1B-201ENST00000216456 CUEDC2Q9H467 287 aa23.77■■□□□ 1.4
VTI1B-201ENST00000216456 SLC39A2Q9NP94 309 aa23.77■■□□□ 1.4
VTI1B-201ENST00000216456 FBXO4Q9UKT5 387 aa23.77■■□□□ 1.4
VTI1B-201ENST00000216456 NME7Q9Y5B8 376 aa23.77■■□□□ 1.4
VTI1B-201ENST00000216456 NCAM2O15394 837 aa23.76■■□□□ 1.39
VTI1B-201ENST00000216456 TADA3O75528 432 aa23.76■■□□□ 1.39
VTI1B-201ENST00000216456 CDC25CP30307 473 aa23.76■■□□□ 1.39
VTI1B-201ENST00000216456 KPNA1P52294 538 aaPredicted RBP23.76■■□□□ 1.39
VTI1B-201ENST00000216456 HPDLQ96IR7 371 aa23.76■■□□□ 1.39
VTI1B-201ENST00000216456 ANKRD36BP1Q96IX9 119 aa23.76■■□□□ 1.39
VTI1B-201ENST00000216456 ACBD6Q9BR61 282 aa23.76■■□□□ 1.39
VTI1B-201ENST00000216456 GZF1Q9H116 711 aaPredicted RBP23.76■■□□□ 1.39
VTI1B-201ENST00000216456 PRMT8Q9NR22 394 aaPredicted RBP23.76■■□□□ 1.39
VTI1B-201ENST00000216456 C2orf42Q9NWW7 574 aa23.76■■□□□ 1.39
VTI1B-201ENST00000216456 GABRDO14764 452 aa23.75■■□□□ 1.39
VTI1B-201ENST00000216456 EIF3DO15371 548 aaKnown RBP eCLIP23.75■■□□□ 1.39
VTI1B-201ENST00000216456 CST3P01034 146 aaPredicted RBP23.75■■□□□ 1.39
VTI1B-201ENST00000216456 DLATP10515 647 aaKnown RBP23.75■■□□□ 1.39
VTI1B-201ENST00000216456 ZNF528Q3MIS6 628 aa23.75■■□□□ 1.39
VTI1B-201ENST00000216456 RESP18Q5W5W9 173 aa23.75■■□□□ 1.39
VTI1B-201ENST00000216456 CNNM4Q6P4Q7 775 aa23.75■■□□□ 1.39
VTI1B-201ENST00000216456 ZC3H14Q6PJT7 736 aaKnown RBP23.75■■□□□ 1.39
VTI1B-201ENST00000216456 Q6ZS52 159 aa23.75■■□□□ 1.39
VTI1B-201ENST00000216456 STXBP4Q6ZWJ1 553 aa23.75■■□□□ 1.39
VTI1B-201ENST00000216456 UNC13DQ70J99 1090 aa23.75■■□□□ 1.39
VTI1B-201ENST00000216456 KIAA2013Q8IYS2 634 aa23.75■■□□□ 1.39
VTI1B-201ENST00000216456 E2F7Q96AV8 911 aa23.75■■□□□ 1.39
VTI1B-201ENST00000216456 ELMO3Q96BJ8 720 aa23.75■■□□□ 1.39
VTI1B-201ENST00000216456 CCDC127Q96BQ5 260 aa23.75■■□□□ 1.39
VTI1B-201ENST00000216456 LRRC27Q9C0I9 530 aa23.75■■□□□ 1.39
VTI1B-201ENST00000216456 SERTAD1Q9UHV2 236 aa23.75■■□□□ 1.39
VTI1B-201ENST00000216456 SPECC1L-ADORA2AF8WAN1 911 aa23.74■■□□□ 1.39
VTI1B-201ENST00000216456 FGF19O95750 216 aa23.74■■□□□ 1.39
VTI1B-201ENST00000216456 PDGFRBP09619 1106 aa23.74■■□□□ 1.39
VTI1B-201ENST00000216456 TDGF1P13385 188 aa23.74■■□□□ 1.39
VTI1B-201ENST00000216456 MAGEA9P43362 315 aa23.74■■□□□ 1.39
VTI1B-201ENST00000216456 AMPD3Q01432 767 aa23.74■■□□□ 1.39
VTI1B-201ENST00000216456 MYL7Q01449 175 aa23.74■■□□□ 1.39
VTI1B-201ENST00000216456 SATB1Q01826 763 aa23.74■■□□□ 1.39
VTI1B-201ENST00000216456 SMARCB1Q12824 385 aa23.74■■□□□ 1.39
VTI1B-201ENST00000216456 SNRNP35Q16560 246 aaKnown RBP23.74■■□□□ 1.39
VTI1B-201ENST00000216456 TRIM68Q6AZZ1 485 aa23.74■■□□□ 1.39
VTI1B-201ENST00000216456 TRAPPC11Q7Z392 1133 aa23.74■■□□□ 1.39
VTI1B-201ENST00000216456 SCN4BQ8IWT1 228 aa23.74■■□□□ 1.39
VTI1B-201ENST00000216456 CMTM8Q8IZV2 173 aa23.74■■□□□ 1.39
VTI1B-201ENST00000216456 TMEM86AQ8N2M4 240 aa23.74■■□□□ 1.39
VTI1B-201ENST00000216456 TOP6BLQ8N6T0 577 aa23.74■■□□□ 1.39
VTI1B-201ENST00000216456 BPIFB1Q8TDL5 484 aa23.74■■□□□ 1.39
VTI1B-201ENST00000216456 ZNF516Q92618 1163 aa23.74■■□□□ 1.39
VTI1B-201ENST00000216456 USP13Q92995 863 aaPredicted RBP23.74■■□□□ 1.39
VTI1B-201ENST00000216456 GCNAQ96QF7 691 aa23.74■■□□□ 1.39
VTI1B-201ENST00000216456 HINFPQ9BQA5 517 aa23.74■■□□□ 1.39
VTI1B-201ENST00000216456 SEMA4AQ9H3S1 761 aa23.74■■□□□ 1.39
VTI1B-201ENST00000216456 CRTAC1Q9NQ79 661 aa23.74■■□□□ 1.39
VTI1B-201ENST00000216456 NUP210Q8TEM1 1887 aaPredicted RBP23.74■■□□□ 1.39
VTI1B-201ENST00000216456 OTOGLQ3ZCN5 2332 aa23.73■■□□□ 1.39
VTI1B-201ENST00000216456 OTOL1A6NHN0 477 aaPredicted RBP23.73■■□□□ 1.39
VTI1B-201ENST00000216456 KINO60870 393 aaKnown RBP23.73■■□□□ 1.39
VTI1B-201ENST00000216456 TNNC2P02585 160 aa23.73■■□□□ 1.39
VTI1B-201ENST00000216456 CTHP32929 405 aa23.73■■□□□ 1.39
VTI1B-201ENST00000216456 CASP4P49662 377 aa23.73■■□□□ 1.39
VTI1B-201ENST00000216456 DMWDQ09019 674 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms