RNA–Protein interactions for RNA: ENST00000173898.11

TRO-201, Transcript of trophinin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRO, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRO-201ENST00000173898 THEMIS2Q5TEJ8 643 aa12.53□□□□□ -0.4
TRO-201ENST00000173898 TSPAN17Q96FV3 270 aa12.53□□□□□ -0.4
TRO-201ENST00000173898 PNMA5Q96PV4 448 aa12.53□□□□□ -0.4
TRO-201ENST00000173898 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.53□□□□□ -0.4
TRO-201ENST00000173898 SLC39A10Q9ULF5 831 aa12.53□□□□□ -0.4
TRO-201ENST00000173898 GTPBP10A4D1E9 387 aaKnown RBP12.53□□□□□ -0.4
TRO-201ENST00000173898 ZSCAN5CA6NGD5 496 aaPredicted RBP12.53□□□□□ -0.4
TRO-201ENST00000173898 GAS2O43903 313 aaKnown RBP12.53□□□□□ -0.4
TRO-201ENST00000173898 ZC3H11AO75152 810 aaKnown RBP eCLIP12.53□□□□□ -0.4
TRO-201ENST00000173898 NDUFS3O75489 264 aa12.53□□□□□ -0.4
TRO-201ENST00000173898 NAMPTP43490 491 aa12.53□□□□□ -0.4
TRO-201ENST00000173898 LAMC2Q13753 1193 aa12.53□□□□□ -0.4
TRO-201ENST00000173898 SPATA17Q96L03 361 aa12.53□□□□□ -0.4
TRO-201ENST00000173898 CDC42EP4Q9H3Q1 356 aaKnown RBP12.53□□□□□ -0.4
TRO-201ENST00000173898 TMBIM4Q9HC24 238 aa12.53□□□□□ -0.4
TRO-201ENST00000173898 PCDHGB4Q9UN71 923 aa12.53□□□□□ -0.4
TRO-201ENST00000173898 ADCY3O60266 1144 aa12.53□□□□□ -0.4
TRO-201ENST00000173898 SEC24DO94855 1032 aaPredicted RBP12.53□□□□□ -0.4
TRO-201ENST00000173898 TFRCP02786 760 aaKnown RBP12.53□□□□□ -0.4
TRO-201ENST00000173898 HMOX2P30519 316 aa12.53□□□□□ -0.4
TRO-201ENST00000173898 AMHR2Q16671 573 aa12.53□□□□□ -0.4
TRO-201ENST00000173898 TFDP3Q5H9I0 405 aa12.53□□□□□ -0.4
TRO-201ENST00000173898 ELMSAN1Q6PJG2 1045 aa12.53□□□□□ -0.4
TRO-201ENST00000173898 NUP93Q8N1F7 819 aa12.53□□□□□ -0.4
TRO-201ENST00000173898 SLC25A41Q8N5S1 370 aa12.53□□□□□ -0.4
TRO-201ENST00000173898 EFHBQ8N7U6 833 aa12.53□□□□□ -0.4
TRO-201ENST00000173898 TMC2Q8TDI7 906 aa12.53□□□□□ -0.4
TRO-201ENST00000173898 EME1Q96AY2 570 aa12.53□□□□□ -0.4
TRO-201ENST00000173898 KATNAL1Q9BW62 490 aa12.53□□□□□ -0.4
TRO-201ENST00000173898 SLC38A7Q9NVC3 462 aa12.53□□□□□ -0.4
TRO-201ENST00000173898 FARP1Q9Y4F1 1045 aaPredicted RBP12.53□□□□□ -0.4
TRO-201ENST00000173898 SALL1Q9NSC2 1324 aa12.53□□□□□ -0.4
TRO-201ENST00000173898 CLTCQ00610 1675 aaKnown RBP12.53□□□□□ -0.4
TRO-201ENST00000173898 DPYSL4O14531 572 aa12.52□□□□□ -0.4
TRO-201ENST00000173898 RPS12P25398 132 aaKnown RBP12.52□□□□□ -0.4
TRO-201ENST00000173898 NOTUMQ6P988 496 aa12.52□□□□□ -0.4
TRO-201ENST00000173898 ARHGAP18Q8N392 663 aa12.52□□□□□ -0.4
TRO-201ENST00000173898 CATSPER1Q8NEC5 780 aa12.52□□□□□ -0.4
TRO-201ENST00000173898 GPRC5AQ8NFJ5 357 aa12.52□□□□□ -0.4
TRO-201ENST00000173898 PBXIP1Q96AQ6 731 aa12.52□□□□□ -0.4
TRO-201ENST00000173898 NSL1Q96IY1 281 aa12.52□□□□□ -0.4
TRO-201ENST00000173898 PDCD2LQ9BRP1 358 aa12.52□□□□□ -0.4
TRO-201ENST00000173898 VPS33BQ9H267 617 aa12.52□□□□□ -0.4
TRO-201ENST00000173898 LATS2Q9NRM7 1088 aa12.52□□□□□ -0.4
TRO-201ENST00000173898 ZC3H4Q9UPT8 1303 aaKnown RBP12.52□□□□□ -0.4
TRO-201ENST00000173898 A0A0A6YYK5 440 aaPredicted RBP12.52□□□□□ -0.41
TRO-201ENST00000173898 ZNF263O14978 683 aa12.52□□□□□ -0.41
TRO-201ENST00000173898 MYO1DO94832 1006 aa12.52□□□□□ -0.41
TRO-201ENST00000173898 FAM200BP0CF97 657 aa12.52□□□□□ -0.41
TRO-201ENST00000173898 TCN1P20061 433 aaPredicted RBP12.52□□□□□ -0.41
TRO-201ENST00000173898 OTUD4Q01804 1114 aaKnown RBP12.52□□□□□ -0.41
TRO-201ENST00000173898 ZBTB17Q13105 803 aa12.52□□□□□ -0.41
TRO-201ENST00000173898 IL31Q6EBC2 164 aa12.52□□□□□ -0.41
TRO-201ENST00000173898 C4orf22Q6V702 233 aa12.52□□□□□ -0.41
TRO-201ENST00000173898 PRPF39Q86UA1 669 aaKnown RBP12.52□□□□□ -0.41
TRO-201ENST00000173898 SHCBP1Q8NEM2 672 aa12.52□□□□□ -0.41
TRO-201ENST00000173898 DNAJC9Q8WXX5 260 aa12.52□□□□□ -0.41
TRO-201ENST00000173898 CDY2AQ9Y6F7 541 aa12.52□□□□□ -0.41
TRO-201ENST00000173898 CDY1Q9Y6F8 540 aa12.52□□□□□ -0.41
TRO-201ENST00000173898 SLC30A1Q9Y6M5 507 aa12.52□□□□□ -0.41
TRO-201ENST00000173898 RPS6KL1Q9Y6S9 549 aa12.52□□□□□ -0.41
TRO-201ENST00000173898 SPATA31A6Q5VVP1 1343 aa12.52□□□□□ -0.41
TRO-201ENST00000173898 MTSS1O43312 755 aa12.52□□□□□ -0.41
TRO-201ENST00000173898 PROSCO94903 275 aa12.52□□□□□ -0.41
TRO-201ENST00000173898 SUPT20HL2P0C7V6 817 aa12.52□□□□□ -0.41
TRO-201ENST00000173898 TAL1P17542 331 aaPredicted RBP12.52□□□□□ -0.41
TRO-201ENST00000173898 HNRNPH1P31943 449 aaKnown RBP12.52□□□□□ -0.41
TRO-201ENST00000173898 TAF6P49848 677 aa12.52□□□□□ -0.41
TRO-201ENST00000173898 ABCE1P61221 599 aaKnown RBP12.52□□□□□ -0.41
TRO-201ENST00000173898 TBX2Q13207 712 aaPredicted RBP12.52□□□□□ -0.41
TRO-201ENST00000173898 FBXO36Q8NEA4 188 aa12.52□□□□□ -0.41
TRO-201ENST00000173898 SGF29Q96ES7 293 aa12.52□□□□□ -0.41
TRO-201ENST00000173898 ZNF512Q96ME7 567 aaPredicted RBP12.52□□□□□ -0.41
TRO-201ENST00000173898 TLR10Q9BXR5 811 aa12.52□□□□□ -0.41
TRO-201ENST00000173898 SHCBP1LQ9BZQ2 653 aa12.52□□□□□ -0.41
TRO-201ENST00000173898 SEMA4AQ9H3S1 761 aa12.52□□□□□ -0.41
TRO-201ENST00000173898 DDIT4Q9NX09 232 aa12.52□□□□□ -0.41
TRO-201ENST00000173898 KLK14Q9P0G3 267 aa12.52□□□□□ -0.41
TRO-201ENST00000173898 PHTF1Q9UMS5 762 aa12.52□□□□□ -0.41
TRO-201ENST00000173898 CYP2C8P10632 490 aa12.52□□□□□ -0.41
TRO-201ENST00000173898 HOXD10P28358 340 aa12.52□□□□□ -0.41
TRO-201ENST00000173898 GRAMD4Q6IC98 578 aa12.52□□□□□ -0.41
TRO-201ENST00000173898 NAPEPLDQ6IQ20 393 aa12.52□□□□□ -0.41
TRO-201ENST00000173898 C16orf87Q6PH81 154 aa12.52□□□□□ -0.41
TRO-201ENST00000173898 ACOT1Q86TX2 421 aa12.52□□□□□ -0.41
TRO-201ENST00000173898 C4orf19Q8IY42 314 aa12.52□□□□□ -0.41
TRO-201ENST00000173898 ANKRD13AQ8IZ07 590 aa12.52□□□□□ -0.41
TRO-201ENST00000173898 TTC30BQ8N4P2 665 aa12.52□□□□□ -0.41
TRO-201ENST00000173898 HDAC7Q8WUI4 952 aa12.52□□□□□ -0.41
TRO-201ENST00000173898 TMEM121Q9BTD3 319 aa12.52□□□□□ -0.41
TRO-201ENST00000173898 DPP3Q9NY33 737 aa12.52□□□□□ -0.41
TRO-201ENST00000173898 ZC3H13Q5T200 1668 aaKnown RBP12.52□□□□□ -0.41
TRO-201ENST00000173898 M0QYT0 321 aa12.51□□□□□ -0.41
TRO-201ENST00000173898 ACO1P21399 889 aaKnown RBP12.51□□□□□ -0.41
TRO-201ENST00000173898 TARSP26639 723 aaKnown RBP12.51□□□□□ -0.41
TRO-201ENST00000173898 SHMT1P34896 483 aa12.51□□□□□ -0.41
TRO-201ENST00000173898 BACE1P56817 501 aa12.51□□□□□ -0.41
TRO-201ENST00000173898 DGKDQ16760 1214 aa12.51□□□□□ -0.41
TRO-201ENST00000173898 GNASQ5JWF2 1037 aa12.51□□□□□ -0.41
TRO-201ENST00000173898 GLB1LQ6UWU2 654 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms