RNA–Protein interactions for RNA: ENST00000043402.7

RTN4R-201, Transcript of reticulon 4 receptor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RTN4R, Length 2,157 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-201ENST00000043402 CYP3A43Q9HB55 503 aa27.52■■■□□ 2
RTN4R-201ENST00000043402 GBA2Q9HCG7 927 aaPredicted RBP27.52■■■□□ 2
RTN4R-201ENST00000043402 SMIM23A6NLE4 172 aa27.51■■□□□ 1.99
RTN4R-201ENST00000043402 LIASO43766 372 aa27.51■■□□□ 1.99
RTN4R-201ENST00000043402 MICAL2O94851 1124 aa27.51■■□□□ 1.99
RTN4R-201ENST00000043402 CETN2P41208 172 aa27.51■■□□□ 1.99
RTN4R-201ENST00000043402 BYSLQ13895 437 aaKnown RBP27.51■■□□□ 1.99
RTN4R-201ENST00000043402 GPR162Q16538 588 aa27.51■■□□□ 1.99
RTN4R-201ENST00000043402 KYAT1Q16773 422 aa27.51■■□□□ 1.99
RTN4R-201ENST00000043402 FAM110CQ1W6H9 321 aa27.51■■□□□ 1.99
RTN4R-201ENST00000043402 SPRYD7Q5W111 196 aa27.51■■□□□ 1.99
RTN4R-201ENST00000043402 SRLQ86TD4 932 aa27.51■■□□□ 1.99
RTN4R-201ENST00000043402 XYLT1Q86Y38 959 aa27.51■■□□□ 1.99
RTN4R-201ENST00000043402 EPS8L3Q8TE67 593 aaKnown RBP27.51■■□□□ 1.99
RTN4R-201ENST00000043402 PPP1R13LQ8WUF5 828 aa27.51■■□□□ 1.99
RTN4R-201ENST00000043402 PWWP2AQ96N64 755 aa27.51■■□□□ 1.99
RTN4R-201ENST00000043402 DPP3Q9NY33 737 aa27.51■■□□□ 1.99
RTN4R-201ENST00000043402 DNPEPQ9ULA0 475 aa27.51■■□□□ 1.99
RTN4R-201ENST00000043402 C2CD2Q9Y426 696 aa27.51■■□□□ 1.99
RTN4R-201ENST00000043402 PSMA2P25787 234 aa27.5■■□□□ 1.99
RTN4R-201ENST00000043402 KLRC2P26717 231 aa27.5■■□□□ 1.99
RTN4R-201ENST00000043402 TMEM62Q0P6H9 643 aa27.5■■□□□ 1.99
RTN4R-201ENST00000043402 TRMT10CQ7L0Y3 403 aaKnown RBP27.5■■□□□ 1.99
RTN4R-201ENST00000043402 TMEM109Q9BVC6 243 aa27.5■■□□□ 1.99
RTN4R-201ENST00000043402 TRAIPQ9BWF2 469 aa27.5■■□□□ 1.99
RTN4R-201ENST00000043402 ANAPC5Q9UJX4 755 aa27.5■■□□□ 1.99
RTN4R-201ENST00000043402 WDR3Q9UNX4 943 aaKnown RBP eCLIP27.5■■□□□ 1.99
RTN4R-201ENST00000043402 hCG_1818297A0A087WSY0 165 aa27.5■■□□□ 1.99
RTN4R-201ENST00000043402 NDUFAB1O14561 156 aa27.5■■□□□ 1.99
RTN4R-201ENST00000043402 TJP3O95049 919 aa27.5■■□□□ 1.99
RTN4R-201ENST00000043402 CDKN2BP42772 138 aa27.5■■□□□ 1.99
RTN4R-201ENST00000043402 ZNF365Q70YC5 407 aa27.5■■□□□ 1.99
RTN4R-201ENST00000043402 ZNF410Q86VK4 478 aa27.5■■□□□ 1.99
RTN4R-201ENST00000043402 EMC1Q8N766 993 aa27.5■■□□□ 1.99
RTN4R-201ENST00000043402 PARK7Q99497 189 aaKnown RBP27.5■■□□□ 1.99
RTN4R-201ENST00000043402 DNAJC17Q9NVM6 304 aaKnown RBP27.5■■□□□ 1.99
RTN4R-201ENST00000043402 ITGA11Q9UKX5 1188 aa27.5■■□□□ 1.99
RTN4R-201ENST00000043402 RRP15Q9Y3B9 282 aaKnown RBP27.5■■□□□ 1.99
RTN4R-201ENST00000043402 ECM2O94769 699 aaPredicted RBP27.49■■□□□ 1.99
RTN4R-201ENST00000043402 COPS2P61201 443 aa27.49■■□□□ 1.99
RTN4R-201ENST00000043402 SLC25A11Q02978 314 aaKnown RBP27.49■■□□□ 1.99
RTN4R-201ENST00000043402 IQSEC1Q6DN90 963 aa27.49■■□□□ 1.99
RTN4R-201ENST00000043402 CCDC89Q8N998 374 aa27.49■■□□□ 1.99
RTN4R-201ENST00000043402 GLIS1Q8NBF1 620 aa27.49■■□□□ 1.99
RTN4R-201ENST00000043402 ADPGKQ9BRR6 497 aa27.49■■□□□ 1.99
RTN4R-201ENST00000043402 ADAMTS10Q9H324 1103 aa27.49■■□□□ 1.99
RTN4R-201ENST00000043402 LRCH4O75427 683 aa27.49■■□□□ 1.99
RTN4R-201ENST00000043402 IL1R2P27930 398 aa27.49■■□□□ 1.99
RTN4R-201ENST00000043402 HOXA11P31270 313 aaPredicted RBP27.49■■□□□ 1.99
RTN4R-201ENST00000043402 GPD2P43304 727 aa27.49■■□□□ 1.99
RTN4R-201ENST00000043402 GSCP56915 257 aaPredicted RBP27.49■■□□□ 1.99
RTN4R-201ENST00000043402 IFI35P80217 286 aaPredicted RBP27.49■■□□□ 1.99
RTN4R-201ENST00000043402 METTL5Q9NRN9 209 aaKnown RBP27.49■■□□□ 1.99
RTN4R-201ENST00000043402 GINS2Q9Y248 185 aa27.49■■□□□ 1.99
RTN4R-201ENST00000043402 DOCK3Q8IZD9 2030 aa27.49■■□□□ 1.99
RTN4R-201ENST00000043402 LRRD1A4D1F6 860 aa27.48■■□□□ 1.99
RTN4R-201ENST00000043402 C3orf70A6NLC5 250 aaPredicted RBP27.48■■□□□ 1.99
RTN4R-201ENST00000043402 PTPN7P35236 360 aa27.48■■□□□ 1.99
RTN4R-201ENST00000043402 SLCO1A2P46721 670 aa27.48■■□□□ 1.99
RTN4R-201ENST00000043402 IRX5P78411 483 aaPredicted RBP27.48■■□□□ 1.99
RTN4R-201ENST00000043402 TFDP3Q5H9I0 405 aa27.48■■□□□ 1.99
RTN4R-201ENST00000043402 PRAMEF19Q5SWL8 479 aa27.48■■□□□ 1.99
RTN4R-201ENST00000043402 FNIP1Q8TF40 1166 aa27.48■■□□□ 1.99
RTN4R-201ENST00000043402 KIF12Q96FN5 646 aa27.48■■□□□ 1.99
RTN4R-201ENST00000043402 HEXIM2Q96MH2 286 aaKnown RBP27.48■■□□□ 1.99
RTN4R-201ENST00000043402 CDHR5Q9HBB8 845 aa27.48■■□□□ 1.99
RTN4R-201ENST00000043402 DDX56Q9NY93 547 aaKnown RBP27.48■■□□□ 1.99
RTN4R-201ENST00000043402 M0QYV0 167 aa27.48■■□□□ 1.99
RTN4R-201ENST00000043402 ACSL3O95573 720 aa27.48■■□□□ 1.99
RTN4R-201ENST00000043402 P4HA1P13674 534 aa27.48■■□□□ 1.99
RTN4R-201ENST00000043402 GRM5P41594 1212 aa27.48■■□□□ 1.99
RTN4R-201ENST00000043402 NDST1P52848 882 aa27.48■■□□□ 1.99
RTN4R-201ENST00000043402 FKBP1BP68106 108 aa27.48■■□□□ 1.99
RTN4R-201ENST00000043402 RBP5P82980 135 aa27.48■■□□□ 1.99
RTN4R-201ENST00000043402 CAV1Q03135 178 aa27.48■■□□□ 1.99
RTN4R-201ENST00000043402 INCA1Q0VD86 236 aa27.48■■□□□ 1.99
RTN4R-201ENST00000043402 C6orf118Q5T5N4 469 aa27.48■■□□□ 1.99
RTN4R-201ENST00000043402 FAM49AQ9H0Q0 323 aaPredicted RBP27.48■■□□□ 1.99
RTN4R-201ENST00000043402 PPANQ9NQ55 473 aaKnown RBP27.48■■□□□ 1.99
RTN4R-201ENST00000043402 BARX2Q9UMQ3 279 aaPredicted RBP27.48■■□□□ 1.99
RTN4R-201ENST00000043402 RGS16O15492 202 aaPredicted RBP27.47■■□□□ 1.99
RTN4R-201ENST00000043402 VDRP11473 427 aa27.47■■□□□ 1.99
RTN4R-201ENST00000043402 CYP3A5P20815 502 aa27.47■■□□□ 1.99
RTN4R-201ENST00000043402 ZNF268Q14587 947 aaPredicted RBP27.47■■□□□ 1.99
RTN4R-201ENST00000043402 CNGA2Q16280 664 aa27.47■■□□□ 1.99
RTN4R-201ENST00000043402 SMTNL2Q2TAL5 461 aa27.47■■□□□ 1.99
RTN4R-201ENST00000043402 DRICH1Q6PGQ1 229 aaPredicted RBP27.47■■□□□ 1.99
RTN4R-201ENST00000043402 GSTA5Q7RTV2 222 aa27.47■■□□□ 1.99
RTN4R-201ENST00000043402 POLNQ7Z5Q5 900 aa27.47■■□□□ 1.99
RTN4R-201ENST00000043402 MDM1Q8TC05 714 aa27.47■■□□□ 1.99
RTN4R-201ENST00000043402 SYNCQ9H7C4 482 aa27.47■■□□□ 1.99
RTN4R-201ENST00000043402 SCN1AP35498 2009 aa27.47■■□□□ 1.99
RTN4R-201ENST00000043402 GABRB2P47870 512 aa27.46■■□□□ 1.99
RTN4R-201ENST00000043402 TNFAIP8L3Q5GJ75 292 aa27.46■■□□□ 1.99
RTN4R-201ENST00000043402 KCNT1Q5JUK3 1230 aa27.46■■□□□ 1.99
RTN4R-201ENST00000043402 DPH6Q7L8W6 267 aa27.46■■□□□ 1.99
RTN4R-201ENST00000043402 UBA3Q8TBC4 463 aa27.46■■□□□ 1.99
RTN4R-201ENST00000043402 HAUS1Q96CS2 278 aa27.46■■□□□ 1.99
RTN4R-201ENST00000043402 ZWILCHQ9H900 591 aa27.46■■□□□ 1.99
RTN4R-201ENST00000043402 WDR35Q9P2L0 1181 aa27.46■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms