RNA–Protein interactions for RNA: ENSMUST00000052648.8

Ccdc28a-201, Transcript of Coiled-coil domain-containing 28A, mousemouse

TSL 1 (best) BASIC

Gene Ccdc28a, Length 2,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-201ENSMUST00000052648 Olfr212Q7TS33 327 aa9.4□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Proser3Q7TSA6 634 aa9.4□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Arhgap15Q811M1 481 aa9.4□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Slfn5Q8CBA2 884 aa9.4□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 FgbQ8K0E8 481 aa9.4□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Dusp19Q8K4T5 220 aa9.4□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Ace2Q8R0I0 805 aa9.4□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Snrnp25Q8VIK1 123 aa9.4□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Lztr1Q9CQ33 837 aa9.4□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Luc7lQ9CYI4 371 aaKnown RBP9.4□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Rnf186Q9D241 226 aa9.4□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Gm3404Q9D506 307 aa9.4□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 CenpkQ9ESN5 271 aa9.4□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Nup50Q9JIH2 466 aaKnown RBP9.4□□□□□ -0.9
Ccdc28a-201ENSMUST00000052648 Adgrf5G5E8Q8 1348 aa9.39□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Capn2O08529 700 aa9.39□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Edil3O35474 480 aa9.39□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Trappc3O55013 180 aa9.39□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 P01878 344 aa9.39□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Rrm1P07742 792 aa9.39□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Itgb1P09055 798 aaKnown RBP9.39□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Pola2P33611 600 aa9.39□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 SftpdP50404 374 aa9.39□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Eef1dP57776 281 aaKnown RBP9.39□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Polr2fP61219 127 aa9.39□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Lhx5P61375 402 aa9.39□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Gjb6P70689 261 aa9.39□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Fut7Q11131 389 aa9.39□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Pi4k2aQ2TBE6 479 aa9.39□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Aarsd1Q3THG9 412 aa9.39□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Ttc9Q3V038 219 aa9.39□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 SpdyaQ5IBH7 310 aa9.39□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 HarsQ61035 509 aa9.39□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Pde1cQ64338 706 aa9.39□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Nrg1Q6DR99 700 aa9.39□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Q6PD19 689 aa9.39□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Q80ZQ3 298 aa9.39□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Fbxw21Q8BI38 468 aa9.39□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Ldhal6bQ8BVP2 382 aa9.39□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Tceal5Q8CCT4 200 aa9.39□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Commd10Q8JZY2 202 aa9.39□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 SarafQ8R3Q0 334 aa9.39□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Ccdc71Q8VEG0 433 aa9.39□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 GOLGA7BQ9D428 167 aa9.39□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Lrrc46Q9DAP0 323 aa9.39□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 PrelpQ9JK53 378 aa9.39□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Cyp39a1Q9JKJ9 470 aa9.39□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Tspan3Q9QY33 253 aa9.39□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Pdzd4Q9QY39 772 aa9.39□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Vwa8Q8CC88 1905 aa9.39□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 0610012G03RikA0A0J9YTR2 95 aa9.39□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Dcpp3L7N259 170 aa9.39□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Axin1O35625 863 aa9.39□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 TertO70372 1122 aa9.39□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Fgf18O89101 207 aa9.39□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 P01652 108 aa9.39□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Myl1P05977 188 aa9.39□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Nr3c1P06537 783 aa9.39□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Oas1aP11928 367 aa9.39□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Kcnd1Q03719 651 aa9.39□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Q3TQQ9 903 aa9.39□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 GstcdQ5RL51 634 aa9.39□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Stip1Q60864 543 aaKnown RBP9.39□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 MyorgQ69ZQ1 716 aa9.39□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 RbfaQ6P3B9 350 aa9.39□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Tatdn1Q6P8M1 295 aa9.39□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Gpr156Q6PCP7 798 aa9.39□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Ostm1Q8BGT0 338 aa9.39□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Tmem209Q8BRG8 561 aaKnown RBP9.39□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 4931406P16RikQ8C5X1 1059 aa9.39□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Oas1gQ8K469 367 aa9.39□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Prrg2Q8R182 198 aa9.39□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 D8Ertd738eQ8R1F0 94 aa9.39□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Tbc1d19Q8VDV7 526 aa9.39□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Arl8aQ8VEH3 186 aa9.39□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Bbs5Q9CZQ9 341 aa9.39□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 IscuQ9D7P6 168 aa9.39□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Erap1Q9EQH2 930 aa9.39□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Wdr54Q9R0D8 334 aa9.39□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Anapc7Q9WVM3 565 aa9.39□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Fam209A2APA5 170 aa9.38□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Farp1F8VPU2 1048 aa9.38□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Xirp1O70373 1129 aa9.38□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Yme1l1O88967 715 aaKnown RBP9.38□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 H2afzP0C0S6 128 aa9.38□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 RdxP26043 583 aaKnown RBP9.38□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 NsfP46460 744 aa9.38□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Psmb7P70195 277 aa9.38□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Ctnnb1Q02248 781 aaKnown RBP9.38□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Myadml2Q08AU7 307 aa9.38□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 H2afvQ3THW5 128 aa9.38□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Cyp2c66Q5GLZ0 490 aa9.38□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Grm6Q5NCH9 871 aa9.38□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Traf3Q60803 567 aa9.38□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Mapre1Q61166 268 aaKnown RBP9.38□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Pacsin1Q61644 441 aa9.38□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Sema5aQ62217 1077 aa9.38□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Scube3Q66PY1 993 aa9.38□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Tmc8Q7TN58 722 aa9.38□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 AarsQ8BGQ7 968 aa9.38□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 27.5 ms